RNA–Protein interactions for RNA: ENST00000560587.1

ZNF280D-215, Transcript of zinc finger protein 280D, human

TSL 1 (best)

Gene ZNF280D, Length 1,441 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF280D-215	ENST00000560587	MRC1	P22897	1456 aa		33.23	■■■□□ 2.91
ZNF280D-215	ENST00000560587	ZNF831	Q5JPB2	1677 aa		33.22	■■■□□ 2.91
ZNF280D-215	ENST00000560587	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.22	■■■□□ 2.91
ZNF280D-215	ENST00000560587	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.22	■■■□□ 2.91
ZNF280D-215	ENST00000560587	NFATC2IP	Q8NCF5	419 aa		33.21	■■■□□ 2.91
ZNF280D-215	ENST00000560587	SLC16A10	Q8TF71	515 aa		33.21	■■■□□ 2.91
ZNF280D-215	ENST00000560587	RSPH6A	Q9H0K4	717 aa		33.21	■■■□□ 2.91
ZNF280D-215	ENST00000560587	PRKAR2B	P31323	418 aa		33.2	■■■□□ 2.91
ZNF280D-215	ENST00000560587	ATP6V1A	P38606	617 aa		33.2	■■■□□ 2.91
ZNF280D-215	ENST00000560587	RALBP1	Q15311	655 aa		33.2	■■■□□ 2.91
ZNF280D-215	ENST00000560587	GAS2L2	Q8NHY3	880 aa		33.2	■■■□□ 2.91
ZNF280D-215	ENST00000560587	RNMT	O43148	476 aa	Known RBP	33.19	■■■□□ 2.9
ZNF280D-215	ENST00000560587	PTGER2	P43116	358 aa		33.19	■■■□□ 2.9
ZNF280D-215	ENST00000560587	AK7	Q96M32	723 aa		33.19	■■■□□ 2.9
ZNF280D-215	ENST00000560587	SLC52A2	Q9HAB3	445 aa		33.19	■■■□□ 2.9
ZNF280D-215	ENST00000560587	MAP3K5	Q99683	1374 aa		33.18	■■■□□ 2.9
ZNF280D-215	ENST00000560587	LGR6	Q9HBX8	967 aa		33.18	■■■□□ 2.9
ZNF280D-215	ENST00000560587	ITPK1	Q13572	414 aa		33.17	■■■□□ 2.9
ZNF280D-215	ENST00000560587	LINC00116	Q8NCU8	138 aa		33.17	■■■□□ 2.9
ZNF280D-215	ENST00000560587	RBM42	Q9BTD8	480 aa	Known RBP	33.17	■■■□□ 2.9
ZNF280D-215	ENST00000560587	UBR3	Q6ZT12	1888 aa		33.16	■■■□□ 2.9
ZNF280D-215	ENST00000560587	MSH5	O43196	834 aa		33.15	■■■□□ 2.9
ZNF280D-215	ENST00000560587	FLAD1	Q8NFF5	587 aa		33.15	■■■□□ 2.9
ZNF280D-215	ENST00000560587	FCHSD2	O94868	740 aa		33.14	■■■□□ 2.9
ZNF280D-215	ENST00000560587	COL23A1	Q86Y22	540 aa	Predicted RBP	33.14	■■■□□ 2.9
ZNF280D-215	ENST00000560587	SGIP1	Q9BQI5	828 aa		33.14	■■■□□ 2.9
ZNF280D-215	ENST00000560587	COL24A1	Q17RW2	1714 aa		33.13	■■■□□ 2.89
ZNF280D-215	ENST00000560587	GNAT3	A8MTJ3	354 aa		33.13	■■■□□ 2.89
ZNF280D-215	ENST00000560587	COL5A3	P25940	1745 aa	Predicted RBP	33.13	■■■□□ 2.89
ZNF280D-215	ENST00000560587	PHACTR3	Q96KR7	559 aa		33.12	■■■□□ 2.89
ZNF280D-215	ENST00000560587	SLC4A9	Q96Q91	983 aa		33.11	■■■□□ 2.89
ZNF280D-215	ENST00000560587	PTCD1	O75127	700 aa	Known RBP	33.11	■■■□□ 2.89
ZNF280D-215	ENST00000560587	CIC	Q96RK0	1608 aa	Predicted RBP	33.1	■■■□□ 2.89
ZNF280D-215	ENST00000560587	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.08	■■■□□ 2.89
ZNF280D-215	ENST00000560587	GNPAT	O15228	680 aa		33.08	■■■□□ 2.89
ZNF280D-215	ENST00000560587	PHF14	O94880	888 aa		33.08	■■■□□ 2.89
ZNF280D-215	ENST00000560587	SSFA2	P28290	1259 aa		33.08	■■■□□ 2.89
ZNF280D-215	ENST00000560587	POLD1	P28340	1107 aa		33.08	■■■□□ 2.89
ZNF280D-215	ENST00000560587	TJP1	Q07157	1748 aa		33.07	■■■□□ 2.88
ZNF280D-215	ENST00000560587	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.06	■■■□□ 2.88
ZNF280D-215	ENST00000560587	AMIGO3	Q86WK7	504 aa		33.06	■■■□□ 2.88
ZNF280D-215	ENST00000560587	ARX	Q96QS3	562 aa		33.06	■■■□□ 2.88
ZNF280D-215	ENST00000560587	TEF	Q10587	303 aa		33.04	■■■□□ 2.88
ZNF280D-215	ENST00000560587	IL17RE	Q8NFR9	667 aa		33.04	■■■□□ 2.88
ZNF280D-215	ENST00000560587	SIPA1L3	O60292	1781 aa	Predicted RBP	33.04	■■■□□ 2.88
ZNF280D-215	ENST00000560587	CNTNAP4	Q9C0A0	1308 aa		33.04	■■■□□ 2.88
ZNF280D-215	ENST00000560587	NEFM	P07197	916 aa		33.03	■■■□□ 2.88
ZNF280D-215	ENST00000560587	KCP	Q6ZWJ8	1503 aa		33.03	■■■□□ 2.88
ZNF280D-215	ENST00000560587	CEMIP	Q8WUJ3	1361 aa		33.02	■■■□□ 2.88
ZNF280D-215	ENST00000560587	SLC39A6	Q13433	755 aa		33.02	■■■□□ 2.88
ZNF280D-215	ENST00000560587	RC3H1	Q5TC82	1133 aa	Known RBP	33.02	■■■□□ 2.88
ZNF280D-215	ENST00000560587	UBR2	Q8IWV8	1755 aa		33.02	■■■□□ 2.88
ZNF280D-215	ENST00000560587	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.01	■■■□□ 2.87
ZNF280D-215	ENST00000560587	MSL1	Q68DK7	614 aa		33	■■■□□ 2.87
ZNF280D-215	ENST00000560587	SMIM5	Q71RC9	77 aa		33	■■■□□ 2.87
ZNF280D-215	ENST00000560587	RTCB	Q9Y3I0	505 aa	Known RBP	33	■■■□□ 2.87
ZNF280D-215	ENST00000560587	TTC5	Q8N0Z6	440 aa		32.98	■■■□□ 2.87
ZNF280D-215	ENST00000560587	RTF1	Q92541	710 aa	Known RBP	32.98	■■■□□ 2.87
ZNF280D-215	ENST00000560587	PNN	Q9H307	717 aa	Known RBP	32.97	■■■□□ 2.87
ZNF280D-215	ENST00000560587	MYH14	Q7Z406	1995 aa	Known RBP	32.96	■■■□□ 2.87
ZNF280D-215	ENST00000560587	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.96	■■■□□ 2.87
ZNF280D-215	ENST00000560587	CRKL	P46109	303 aa	Known RBP	32.95	■■■□□ 2.87
ZNF280D-215	ENST00000560587	SYT17	Q9BSW7	474 aa		32.95	■■■□□ 2.87
ZNF280D-215	ENST00000560587	ADRA2B	P18089	450 aa		32.94	■■■□□ 2.86
ZNF280D-215	ENST00000560587	PLEKHF1	Q96S99	279 aa		32.94	■■■□□ 2.86
ZNF280D-215	ENST00000560587	HTATSF1	O43719	755 aa	Known RBP	32.94	■■■□□ 2.86
ZNF280D-215	ENST00000560587	TRAPPC3L	Q5T215	181 aa		32.94	■■■□□ 2.86
ZNF280D-215	ENST00000560587	DNAJC10	Q8IXB1	793 aa		32.94	■■■□□ 2.86
ZNF280D-215	ENST00000560587	MAPK8IP3	Q9UPT6	1336 aa		32.93	■■■□□ 2.86
ZNF280D-215	ENST00000560587	RPS6KA4	O75676	772 aa		32.93	■■■□□ 2.86
ZNF280D-215	ENST00000560587	VSIG10	Q8N0Z9	540 aa		32.93	■■■□□ 2.86
ZNF280D-215	ENST00000560587	ZNF790	Q6PG37	636 aa		32.92	■■■□□ 2.86
ZNF280D-215	ENST00000560587	MCM10	Q7L590	875 aa		32.92	■■■□□ 2.86
ZNF280D-215	ENST00000560587	DLG5	Q8TDM6	1919 aa		32.91	■■■□□ 2.86
ZNF280D-215	ENST00000560587	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.91	■■■□□ 2.86
ZNF280D-215	ENST00000560587	KLHL34	Q8N239	644 aa		32.91	■■■□□ 2.86
ZNF280D-215	ENST00000560587	C4A	P0C0L4	1744 aa		32.91	■■■□□ 2.86
ZNF280D-215	ENST00000560587	DCAF8L1	A6NGE4	600 aa		32.89	■■■□□ 2.86
ZNF280D-215	ENST00000560587	BTBD11	A6QL63	1104 aa		32.88	■■■□□ 2.85
ZNF280D-215	ENST00000560587	ARHGEF1	Q92888	912 aa	Known RBP	32.87	■■■□□ 2.85
ZNF280D-215	ENST00000560587	ZNF496	Q96IT1	587 aa	Predicted RBP	32.87	■■■□□ 2.85
ZNF280D-215	ENST00000560587	CCDC87	Q9NVE4	849 aa		32.87	■■■□□ 2.85
ZNF280D-215	ENST00000560587	CYP19A1	P11511	503 aa	Predicted RBP	32.86	■■■□□ 2.85
ZNF280D-215	ENST00000560587	RFC4	P35249	363 aa		32.86	■■■□□ 2.85
ZNF280D-215	ENST00000560587	DCTN1	Q14203	1278 aa		32.86	■■■□□ 2.85
ZNF280D-215	ENST00000560587	NFE2L2	Q16236	605 aa		32.86	■■■□□ 2.85
ZNF280D-215	ENST00000560587	INTS5	Q6P9B9	1019 aa	Known RBP	32.86	■■■□□ 2.85
ZNF280D-215	ENST00000560587	HEG1	Q9ULI3	1381 aa		32.86	■■■□□ 2.85
ZNF280D-215	ENST00000560587	WDR43	Q15061	677 aa	Known RBP eCLIP	32.84	■■■□□ 2.85
ZNF280D-215	ENST00000560587	FMNL2	Q96PY5	1086 aa		32.84	■■■□□ 2.85
ZNF280D-215	ENST00000560587	STARD3NL	O95772	234 aa		32.81	■■■□□ 2.84
ZNF280D-215	ENST00000560587	SOS1	Q07889	1333 aa	Predicted RBP	32.8	■■■□□ 2.84
ZNF280D-215	ENST00000560587	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.8	■■■□□ 2.84
ZNF280D-215	ENST00000560587	NLGN1	Q8N2Q7	840 aa		32.79	■■■□□ 2.84
ZNF280D-215	ENST00000560587	ZBTB1	Q9Y2K1	713 aa		32.79	■■■□□ 2.84
ZNF280D-215	ENST00000560587	KCNQ3	O43525	872 aa		32.78	■■■□□ 2.84
ZNF280D-215	ENST00000560587	GYS1	P13807	737 aa		32.78	■■■□□ 2.84
ZNF280D-215	ENST00000560587	USP42	Q9H9J4	1324 aa	Known RBP	32.78	■■■□□ 2.84
ZNF280D-215	ENST00000560587	MMP10	P09238	476 aa		32.77	■■■□□ 2.84
ZNF280D-215	ENST00000560587	TAF7	Q15545	349 aa	Predicted RBP	32.77	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms