RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 HMGB2P26583 209 aaKnown RBP24.46■■□□□ 1.51
RPL28-210ENST00000560583 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.45■■□□□ 1.5
RPL28-210ENST00000560583 PHF14O94880 888 aa24.45■■□□□ 1.5
RPL28-210ENST00000560583 GPR162Q16538 588 aa24.45■■□□□ 1.5
RPL28-210ENST00000560583 ZNF530Q6P9A1 599 aaPredicted RBP24.45■■□□□ 1.5
RPL28-210ENST00000560583 ZNF784Q8NCA9 323 aaPredicted RBP24.45■■□□□ 1.5
RPL28-210ENST00000560583 CICQ96RK0 1608 aaPredicted RBP24.45■■□□□ 1.5
RPL28-210ENST00000560583 IL13P35225 146 aa24.44■■□□□ 1.5
RPL28-210ENST00000560583 PLEKHO1Q53GL0 409 aaPredicted RBP24.44■■□□□ 1.5
RPL28-210ENST00000560583 DCAF5Q96JK2 942 aa24.44■■□□□ 1.5
RPL28-210ENST00000560583 SLC4A9Q96Q91 983 aa24.44■■□□□ 1.5
RPL28-210ENST00000560583 C4AP0C0L4 1744 aa24.44■■□□□ 1.5
RPL28-210ENST00000560583 TJP1Q07157 1748 aa24.44■■□□□ 1.5
RPL28-210ENST00000560583 SSFA2P28290 1259 aa24.43■■□□□ 1.5
RPL28-210ENST00000560583 ERVV-2B6SEH9 535 aa24.42■■□□□ 1.5
RPL28-210ENST00000560583 ATP6V1AP38606 617 aa24.42■■□□□ 1.5
RPL28-210ENST00000560583 MYH14Q7Z406 1995 aaKnown RBP24.42■■□□□ 1.5
RPL28-210ENST00000560583 PER1O15534 1290 aaPredicted RBP24.41■■□□□ 1.5
RPL28-210ENST00000560583 HSP90AB1P08238 724 aaKnown RBP24.41■■□□□ 1.5
RPL28-210ENST00000560583 YBX3P16989 372 aaKnown RBP eCLIP24.41■■□□□ 1.52e-8■■□□□ 14.3
RPL28-210ENST00000560583 AMOTQ4VCS5 1084 aa24.41■■□□□ 1.5
RPL28-210ENST00000560583 SULT6B1Q6IMI4 303 aa24.41■■□□□ 1.5
RPL28-210ENST00000560583 PELP1Q8IZL8 1130 aaKnown RBP24.41■■□□□ 1.5
RPL28-210ENST00000560583 GNPATO15228 680 aa24.4■■□□□ 1.5
RPL28-210ENST00000560583 KIAA1551Q9HCM1 1747 aa24.39■■□□□ 1.5
RPL28-210ENST00000560583 ADAMTS7Q9UKP4 1686 aa24.39■■□□□ 1.49
RPL28-210ENST00000560583 KIF13BQ9NQT8 1826 aa24.38■■□□□ 1.49
RPL28-210ENST00000560583 CD2APQ9Y5K6 639 aa24.38■■□□□ 1.49
RPL28-210ENST00000560583 COL3A1P02461 1466 aaPredicted RBP24.38■■□□□ 1.49
RPL28-210ENST00000560583 MRC1P22897 1456 aa24.37■■□□□ 1.49
RPL28-210ENST00000560583 MTHFSP49914 203 aa24.36■■□□□ 1.49
RPL28-210ENST00000560583 C1orf141Q5JVX7 400 aa24.35■■□□□ 1.49
RPL28-210ENST00000560583 RBM42Q9BTD8 480 aaKnown RBP24.35■■□□□ 1.49
RPL28-210ENST00000560583 CABP4P57796 275 aa24.34■■□□□ 1.49
RPL28-210ENST00000560583 CC2D1BQ5T0F9 858 aaKnown RBP24.33■■□□□ 1.49
RPL28-210ENST00000560583 CNTNAP4Q9C0A0 1308 aa24.33■■□□□ 1.48
RPL28-210ENST00000560583 NPC1L1Q9UHC9 1359 aa24.32■■□□□ 1.48
RPL28-210ENST00000560583 NFATC2IPQ8NCF5 419 aa24.3■■□□□ 1.48
RPL28-210ENST00000560583 N4BP2Q86UW6 1770 aaPredicted RBP24.29■■□□□ 1.48
RPL28-210ENST00000560583 HMOX1P09601 288 aa24.29■■□□□ 1.48
RPL28-210ENST00000560583 RC3H1Q5TC82 1133 aaKnown RBP24.29■■□□□ 1.48
RPL28-210ENST00000560583 RTCBQ9Y3I0 505 aaKnown RBP24.29■■□□□ 1.48
RPL28-210ENST00000560583 UBR2Q8IWV8 1755 aa24.29■■□□□ 1.48
RPL28-210ENST00000560583 GRIN3BO60391 1043 aa24.28■■□□□ 1.48
RPL28-210ENST00000560583 AKAP4Q5JQC9 854 aa24.28■■□□□ 1.48
RPL28-210ENST00000560583 KCPQ6ZWJ8 1503 aa24.28■■□□□ 1.48
RPL28-210ENST00000560583 PTCD1O75127 700 aaKnown RBP24.27■■□□□ 1.48
RPL28-210ENST00000560583 MMP10P09238 476 aa24.27■■□□□ 1.48
RPL28-210ENST00000560583 C10orf71Q711Q0 1435 aa24.27■■□□□ 1.48
RPL28-210ENST00000560583 PXDNLA1KZ92 1463 aa24.26■■□□□ 1.47
RPL28-210ENST00000560583 BRCA1P38398 1863 aaKnown RBP24.26■■□□□ 1.47
RPL28-210ENST00000560583 RPS6KA4O75676 772 aa24.26■■□□□ 1.47
RPL28-210ENST00000560583 ADRA2BP18089 450 aa24.26■■□□□ 1.47
RPL28-210ENST00000560583 ARHGEF1Q92888 912 aaKnown RBP24.26■■□□□ 1.47
RPL28-210ENST00000560583 SIPA1L3O60292 1781 aaPredicted RBP24.25■■□□□ 1.47
RPL28-210ENST00000560583 DIAPH1O60610 1272 aaKnown RBP24.25■■□□□ 1.47
RPL28-210ENST00000560583 TRAPPC3LQ5T215 181 aa24.25■■□□□ 1.47
RPL28-210ENST00000560583 LGR6Q9HBX8 967 aa24.25■■□□□ 1.47
RPL28-210ENST00000560583 SLC52A2Q9HAB3 445 aa24.24■■□□□ 1.47
RPL28-210ENST00000560583 WWC3Q9ULE0 1092 aa24.24■■□□□ 1.47
RPL28-210ENST00000560583 GYS1P13807 737 aa24.23■■□□□ 1.47
RPL28-210ENST00000560583 CRKLP46109 303 aaKnown RBP24.23■■□□□ 1.47
RPL28-210ENST00000560583 MTHFSDQ2M296 383 aaKnown RBP24.23■■□□□ 1.47
RPL28-210ENST00000560583 ADCY9O60503 1353 aa24.22■■□□□ 1.47
RPL28-210ENST00000560583 RNMTO43148 476 aaKnown RBP24.22■■□□□ 1.47
RPL28-210ENST00000560583 ATP10DQ9P241 1426 aa24.2■■□□□ 1.46
RPL28-210ENST00000560583 CNGB1Q14028 1251 aaPredicted RBP24.2■■□□□ 1.46
RPL28-210ENST00000560583 NLGN1Q8N2Q7 840 aa24.2■■□□□ 1.46
RPL28-210ENST00000560583 RFC4P35249 363 aa24.19■■□□□ 1.46
RPL28-210ENST00000560583 USP42Q9H9J4 1324 aaKnown RBP24.18■■□□□ 1.46
RPL28-210ENST00000560583 SLC39A6Q13433 755 aa24.18■■□□□ 1.46
RPL28-210ENST00000560583 INTS5Q6P9B9 1019 aaKnown RBP24.18■■□□□ 1.46
RPL28-210ENST00000560583 DNAJC10Q8IXB1 793 aa24.18■■□□□ 1.46
RPL28-210ENST00000560583 SRP68Q9UHB9 627 aaKnown RBP24.18■■□□□ 1.46
RPL28-210ENST00000560583 C1QTNF8P60827 252 aa24.16■■□□□ 1.46
RPL28-210ENST00000560583 ARFGEF1Q9Y6D6 1849 aa24.14■■□□□ 1.46
RPL28-210ENST00000560583 SOS1Q07889 1333 aaPredicted RBP24.13■■□□□ 1.45
RPL28-210ENST00000560583 AFDNP55196 1824 aaKnown RBP24.13■■□□□ 1.45
RPL28-210ENST00000560583 U2SURPO15042 1029 aaKnown RBP24.13■■□□□ 1.45
RPL28-210ENST00000560583 DDR1Q08345 913 aa24.13■■□□□ 1.45
RPL28-210ENST00000560583 FKBP8Q14318 412 aa24.13■■□□□ 1.45
RPL28-210ENST00000560583 CCDC87Q9NVE4 849 aa24.13■■□□□ 1.45
RPL28-210ENST00000560583 GIGYF1O75420 1035 aaPredicted RBP24.12■■□□□ 1.45
RPL28-210ENST00000560583 CYP19A1P11511 503 aaPredicted RBP24.12■■□□□ 1.45
RPL28-210ENST00000560583 NRXN2Q9P2S2 1712 aa24.12■■□□□ 1.45
RPL28-210ENST00000560583 TGFB2P61812 414 aa24.11■■□□□ 1.45
RPL28-210ENST00000560583 PARP3Q9Y6F1 533 aa24.11■■□□□ 1.45
RPL28-210ENST00000560583 A0A0G2JLW4 131 aa24.1■■□□□ 1.45
RPL28-210ENST00000560583 COL15A1P39059 1388 aa24.1■■□□□ 1.45
RPL28-210ENST00000560583 SCN7AQ01118 1682 aa24.09■■□□□ 1.45
RPL28-210ENST00000560583 DPEP1P16444 411 aa24.09■■□□□ 1.45
RPL28-210ENST00000560583 ZBTB1Q9Y2K1 713 aa24.09■■□□□ 1.45
RPL28-210ENST00000560583 IL17REQ8NFR9 667 aa24.08■■□□□ 1.45
RPL28-210ENST00000560583 CEMIPQ8WUJ3 1361 aa24.07■■□□□ 1.44
RPL28-210ENST00000560583 DLEC1Q9Y238 1755 aa24.07■■□□□ 1.44
RPL28-210ENST00000560583 VSIG10Q8N0Z9 540 aa24.07■■□□□ 1.44
RPL28-210ENST00000560583 GAS2L2Q8NHY3 880 aa24.07■■□□□ 1.44
RPL28-210ENST00000560583 RSPH6AQ9H0K4 717 aa24.07■■□□□ 1.44
RPL28-210ENST00000560583 KCNA3P22001 575 aa24.06■■□□□ 1.44
RPL28-210ENST00000560583 USPL1Q5W0Q7 1092 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms