RNA–Protein interactions for RNA: ENST00000560563.1

ACTC1-203, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 2

Gene ACTC1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-203ENST00000560563 SHPRHQ149N8 1683 aa11.14□□□□□ -0.63
ACTC1-203ENST00000560563 MAP2P11137 1827 aaKnown RBP11.14□□□□□ -0.63
ACTC1-203ENST00000560563 COL3A1P02461 1466 aaPredicted RBP11.13□□□□□ -0.63
ACTC1-203ENST00000560563 ABCA3Q99758 1704 aa11.13□□□□□ -0.63
ACTC1-203ENST00000560563 PEAK1Q9H792 1746 aa11.13□□□□□ -0.63
ACTC1-203ENST00000560563 LARP6Q9BRS8 491 aaKnown RBP11.13□□□□□ -0.63
ACTC1-203ENST00000560563 SPATA31A6Q5VVP1 1343 aa11.12□□□□□ -0.63
ACTC1-203ENST00000560563 DIAPH1O60610 1272 aaKnown RBP11.12□□□□□ -0.63
ACTC1-203ENST00000560563 PBX2P40425 430 aa11.12□□□□□ -0.63
ACTC1-203ENST00000560563 PNISRQ8TF01 805 aaKnown RBP11.12□□□□□ -0.63
ACTC1-203ENST00000560563 PRDM11Q9NQV5 511 aa11.12□□□□□ -0.63
ACTC1-203ENST00000560563 LTN1O94822 1766 aa11.11□□□□□ -0.63
ACTC1-203ENST00000560563 PSDA5PKW4 1024 aaPredicted RBP11.11□□□□□ -0.63
ACTC1-203ENST00000560563 NUTM2BA6NNL0 878 aaPredicted RBP11.11□□□□□ -0.63
ACTC1-203ENST00000560563 NUTM2EB1AL46 878 aaPredicted RBP11.11□□□□□ -0.63
ACTC1-203ENST00000560563 IL13P35225 146 aa11.11□□□□□ -0.63
ACTC1-203ENST00000560563 CHRNA2Q15822 529 aa11.11□□□□□ -0.63
ACTC1-203ENST00000560563 NUTM2AQ8IVF1 878 aaPredicted RBP11.11□□□□□ -0.63
ACTC1-203ENST00000560563 BLMP54132 1417 aaPredicted RBP11.1□□□□□ -0.63
ACTC1-203ENST00000560563 ABCC6O95255 1503 aa11.1□□□□□ -0.63
ACTC1-203ENST00000560563 FAM83GA6ND36 823 aa11.1□□□□□ -0.63
ACTC1-203ENST00000560563 ADAMTS2O95450 1211 aa11.1□□□□□ -0.63
ACTC1-203ENST00000560563 EIF4A2Q14240 407 aaKnown RBP11.1□□□□□ -0.63
ACTC1-203ENST00000560563 NUDCQ9Y266 331 aa11.1□□□□□ -0.63
ACTC1-203ENST00000560563 COL18A1P39060 1754 aa11.09□□□□□ -0.63
ACTC1-203ENST00000560563 OXER1Q8TDS5 423 aa11.09□□□□□ -0.63
ACTC1-203ENST00000560563 ARHGAP33O14559 1287 aa11.08□□□□□ -0.64
ACTC1-203ENST00000560563 WDR43Q15061 677 aaKnown RBP eCLIP11.08□□□□□ -0.64
ACTC1-203ENST00000560563 PPP4R3BQ5MIZ7 849 aa11.08□□□□□ -0.64
ACTC1-203ENST00000560563 FAM9BQ8IZU0 186 aa11.08□□□□□ -0.64
ACTC1-203ENST00000560563 ANKRD24Q8TF21 1146 aa11.08□□□□□ -0.64
ACTC1-203ENST00000560563 LTV1Q96GA3 475 aaPredicted RBP11.08□□□□□ -0.64
ACTC1-203ENST00000560563 ADAMTS8Q9UP79 889 aa11.08□□□□□ -0.64
ACTC1-203ENST00000560563 LRP6O75581 1613 aa11.07□□□□□ -0.64
ACTC1-203ENST00000560563 U2SURPO15042 1029 aaKnown RBP11.07□□□□□ -0.64
ACTC1-203ENST00000560563 PTGER2P43116 358 aa11.07□□□□□ -0.64
ACTC1-203ENST00000560563 PSEN2P49810 448 aa11.07□□□□□ -0.64
ACTC1-203ENST00000560563 DDX27Q96GQ7 796 aaKnown RBP11.07□□□□□ -0.64
ACTC1-203ENST00000560563 LMO7Q8WWI1 1683 aa11.07□□□□□ -0.64
ACTC1-203ENST00000560563 CAMTA1Q9Y6Y1 1673 aa11.07□□□□□ -0.64
ACTC1-203ENST00000560563 COL14A1Q05707 1796 aaKnown RBP11.06□□□□□ -0.64
ACTC1-203ENST00000560563 U2AF1L5P0DN76 240 aaPredicted RBP11.06□□□□□ -0.64
ACTC1-203ENST00000560563 U2AF1Q01081 240 aaKnown RBP eCLIP11.06□□□□□ -0.64
ACTC1-203ENST00000560563 EYA1Q99502 592 aa11.06□□□□□ -0.64
ACTC1-203ENST00000560563 BTG4Q9NY30 223 aa11.06□□□□□ -0.64
ACTC1-203ENST00000560563 COL5A2P05997 1499 aaPredicted RBP11.06□□□□□ -0.64
ACTC1-203ENST00000560563 EVA1CP58658 441 aa11.05□□□□□ -0.64
ACTC1-203ENST00000560563 NBPF6Q5VWK0 638 aa11.05□□□□□ -0.64
ACTC1-203ENST00000560563 NBPF4Q96M43 638 aa11.05□□□□□ -0.64
ACTC1-203ENST00000560563 IGSF1Q8N6C5 1336 aa11.05□□□□□ -0.64
ACTC1-203ENST00000560563 CSB-PGBD3P0DP91 1061 aa11.04□□□□□ -0.64
ACTC1-203ENST00000560563 DMRTA1Q5VZB9 504 aa11.04□□□□□ -0.64
ACTC1-203ENST00000560563 SULT6B1Q6IMI4 303 aa11.04□□□□□ -0.64
ACTC1-203ENST00000560563 FNBP4Q8N3X1 1017 aaPredicted RBP11.04□□□□□ -0.64
ACTC1-203ENST00000560563 NGLY1Q96IV0 654 aa11.04□□□□□ -0.64
ACTC1-203ENST00000560563 C8orf37Q96NL8 207 aa11.04□□□□□ -0.64
ACTC1-203ENST00000560563 WDR17Q8IZU2 1322 aa11.04□□□□□ -0.64
ACTC1-203ENST00000560563 SLIT2O94813 1529 aa11.04□□□□□ -0.64
ACTC1-203ENST00000560563 RGPD1P0DJD0 1748 aa11.04□□□□□ -0.64
ACTC1-203ENST00000560563 RGPD5Q99666 1765 aa11.03□□□□□ -0.64
ACTC1-203ENST00000560563 FCHSD2O94868 740 aa11.03□□□□□ -0.64
ACTC1-203ENST00000560563 HMOX1P09601 288 aa11.03□□□□□ -0.64
ACTC1-203ENST00000560563 MEX3CQ5U5Q3 659 aaKnown RBP11.03□□□□□ -0.64
ACTC1-203ENST00000560563 AEBP1Q8IUX7 1158 aa11.03□□□□□ -0.64
ACTC1-203ENST00000560563 ZNF454Q8N9F8 522 aa11.03□□□□□ -0.64
ACTC1-203ENST00000560563 RSPH6AQ9H0K4 717 aa11.03□□□□□ -0.64
ACTC1-203ENST00000560563 STRN4Q9NRL3 753 aa11.03□□□□□ -0.64
ACTC1-203ENST00000560563 KDRP35968 1356 aa11.03□□□□□ -0.64
ACTC1-203ENST00000560563 NCAPD2Q15021 1401 aa11.02□□□□□ -0.64
ACTC1-203ENST00000560563 LARP1Q6PKG0 1096 aaKnown RBP11.02□□□□□ -0.65
ACTC1-203ENST00000560563 ADGRD1Q6QNK2 874 aa11.02□□□□□ -0.65
ACTC1-203ENST00000560563 TOM1L2Q6ZVM7 507 aa11.02□□□□□ -0.65
ACTC1-203ENST00000560563 USHBP1Q8N6Y0 703 aa11.02□□□□□ -0.65
ACTC1-203ENST00000560563 KCNK17Q96T54 332 aa11.02□□□□□ -0.65
ACTC1-203ENST00000560563 PNNQ9H307 717 aaKnown RBP11.02□□□□□ -0.65
ACTC1-203ENST00000560563 NLRP2Q9NX02 1062 aa11.02□□□□□ -0.65
ACTC1-203ENST00000560563 PRKAR2BP31323 418 aa11.01□□□□□ -0.65
ACTC1-203ENST00000560563 UNC5CLQ8IV45 518 aa11.01□□□□□ -0.65
ACTC1-203ENST00000560563 CCDC146Q8IYE0 955 aa11.01□□□□□ -0.65
ACTC1-203ENST00000560563 RUNDC1Q96C34 613 aa11.01□□□□□ -0.65
ACTC1-203ENST00000560563 PLEKHF1Q96S99 279 aa11.01□□□□□ -0.65
ACTC1-203ENST00000560563 CARD10Q9BWT7 1032 aa11.01□□□□□ -0.65
ACTC1-203ENST00000560563 PLCH1Q4KWH8 1693 aa11.01□□□□□ -0.65
ACTC1-203ENST00000560563 CRB1P82279 1406 aa11.01□□□□□ -0.65
ACTC1-203ENST00000560563 BCL9LQ86UU0 1499 aa11□□□□□ -0.65
ACTC1-203ENST00000560563 MAP3K9P80192 1104 aa11□□□□□ -0.65
ACTC1-203ENST00000560563 USP21Q9UK80 565 aa11□□□□□ -0.65
ACTC1-203ENST00000560563 FAM208AQ9UK61 1670 aaKnown RBP11□□□□□ -0.65
ACTC1-203ENST00000560563 NRAPQ86VF7 1730 aa11□□□□□ -0.65
ACTC1-203ENST00000560563 NWD2Q9ULI1 1742 aa11□□□□□ -0.65
ACTC1-203ENST00000560563 EVI5O60447 810 aa10.99□□□□□ -0.65
ACTC1-203ENST00000560563 BBXQ8WY36 941 aaPredicted RBP10.99□□□□□ -0.65
ACTC1-203ENST00000560563 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
ACTC1-203ENST00000560563 AFF2P51816 1311 aa10.99□□□□□ -0.65
ACTC1-203ENST00000560563 RGPD2P0DJD1 1756 aa10.98□□□□□ -0.65
ACTC1-203ENST00000560563 APAF1O14727 1248 aa10.98□□□□□ -0.65
ACTC1-203ENST00000560563 NEFMP07197 916 aa10.98□□□□□ -0.65
ACTC1-203ENST00000560563 MFSD10Q14728 455 aa10.98□□□□□ -0.65
ACTC1-203ENST00000560563 VPS72Q15906 364 aa10.98□□□□□ -0.65
ACTC1-203ENST00000560563 PHACTR3Q96KR7 559 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms