RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 CENPCQ03188 943 aa7.65□□□□□ -1.18
TMOD3-207ENST00000560549 POU4F2Q12837 409 aa7.65□□□□□ -1.18
TMOD3-207ENST00000560549 GAS6Q14393 721 aa7.65□□□□□ -1.18
TMOD3-207ENST00000560549 SLC27A3Q5K4L6 730 aa7.65□□□□□ -1.18
TMOD3-207ENST00000560549 GLMNQ92990 594 aa7.65□□□□□ -1.18
TMOD3-207ENST00000560549 PCDHGA11Q9Y5H2 935 aa7.65□□□□□ -1.18
TMOD3-207ENST00000560549 USP17L5A8MUK1 530 aa7.64□□□□□ -1.19
TMOD3-207ENST00000560549 WWC1Q8IX03 1113 aa7.64□□□□□ -1.19
TMOD3-207ENST00000560549 WASLO00401 505 aaPredicted RBP7.63□□□□□ -1.19
TMOD3-207ENST00000560549 DBN1Q16643 649 aa7.63□□□□□ -1.19
TMOD3-207ENST00000560549 NFATC2IPQ8NCF5 419 aa7.63□□□□□ -1.19
TMOD3-207ENST00000560549 ESF1Q9H501 851 aaKnown RBP7.63□□□□□ -1.19
TMOD3-207ENST00000560549 GDF10P55107 478 aa7.62□□□□□ -1.19
TMOD3-207ENST00000560549 ZNF385CQ66K41 422 aaPredicted RBP7.62□□□□□ -1.19
TMOD3-207ENST00000560549 TAS1R3Q7RTX0 852 aa7.62□□□□□ -1.19
TMOD3-207ENST00000560549 SIRT1Q96EB6 747 aa7.62□□□□□ -1.19
TMOD3-207ENST00000560549 KIAA1024Q9UPX6 916 aa7.62□□□□□ -1.19
TMOD3-207ENST00000560549 USP3Q9Y6I4 520 aa7.62□□□□□ -1.19
TMOD3-207ENST00000560549 RB1CC1Q8TDY2 1594 aa7.62□□□□□ -1.19
TMOD3-207ENST00000560549 USP17L3A6NCW0 530 aa7.62□□□□□ -1.19
TMOD3-207ENST00000560549 USP17L4A6NCW7 530 aa7.62□□□□□ -1.19
TMOD3-207ENST00000560549 THBS1P07996 1170 aa7.62□□□□□ -1.19
TMOD3-207ENST00000560549 ESCO1Q5FWF5 840 aa7.62□□□□□ -1.19
TMOD3-207ENST00000560549 USP17L2Q6R6M4 530 aa7.62□□□□□ -1.19
TMOD3-207ENST00000560549 USP17L1Q7RTZ2 530 aa7.62□□□□□ -1.19
TMOD3-207ENST00000560549 NACADO15069 1562 aa7.61□□□□□ -1.19
TMOD3-207ENST00000560549 H7C1W4 665 aa7.61□□□□□ -1.19
TMOD3-207ENST00000560549 SUPT5HO00267 1087 aaKnown RBP7.61□□□□□ -1.19
TMOD3-207ENST00000560549 INHAP05111 366 aa7.61□□□□□ -1.19
TMOD3-207ENST00000560549 EML3Q32P44 896 aa7.61□□□□□ -1.19
TMOD3-207ENST00000560549 ZNF295-AS1Q8N0V1 137 aa7.61□□□□□ -1.19
TMOD3-207ENST00000560549 ZSCAN10Q96SZ4 725 aaPredicted RBP7.61□□□□□ -1.19
TMOD3-207ENST00000560549 ZMYND15Q9H091 742 aa7.61□□□□□ -1.19
TMOD3-207ENST00000560549 ATP9BO43861 1147 aa7.6□□□□□ -1.19
TMOD3-207ENST00000560549 ARHGEF15O94989 841 aa7.6□□□□□ -1.19
TMOD3-207ENST00000560549 F11P03951 625 aa7.6□□□□□ -1.19
TMOD3-207ENST00000560549 PHKA2P46019 1235 aa7.6□□□□□ -1.19
TMOD3-207ENST00000560549 GTF2IP78347 998 aa7.6□□□□□ -1.19
TMOD3-207ENST00000560549 CLDN10P78369 228 aa7.6□□□□□ -1.19
TMOD3-207ENST00000560549 SRSF11Q05519 484 aaKnown RBP7.6□□□□□ -1.19
TMOD3-207ENST00000560549 TLR1Q15399 786 aa7.6□□□□□ -1.19
TMOD3-207ENST00000560549 C4orf17Q53FE4 359 aa7.6□□□□□ -1.19
TMOD3-207ENST00000560549 WHAMMQ8TF30 809 aa7.6□□□□□ -1.19
TMOD3-207ENST00000560549 TIMMDC1Q9NPL8 285 aa7.6□□□□□ -1.19
TMOD3-207ENST00000560549 GSK3AP49840 483 aa7.59□□□□□ -1.19
TMOD3-207ENST00000560549 PPARGC1BQ86YN6 1023 aaKnown RBP7.59□□□□□ -1.19
TMOD3-207ENST00000560549 PLEKHM2Q8IWE5 1019 aa7.59□□□□□ -1.19
TMOD3-207ENST00000560549 SERTAD1Q9UHV2 236 aa7.59□□□□□ -1.19
TMOD3-207ENST00000560549 ZBTB7BO15156 539 aaPredicted RBP7.58□□□□□ -1.2
TMOD3-207ENST00000560549 ADAMTS2O95450 1211 aa7.58□□□□□ -1.2
TMOD3-207ENST00000560549 UBAP2LQ14157 1087 aaKnown RBP7.58□□□□□ -1.2
TMOD3-207ENST00000560549 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
TMOD3-207ENST00000560549 NOD1Q9Y239 953 aa7.58□□□□□ -1.2
TMOD3-207ENST00000560549 A0A1B0GTH6 734 aa7.57□□□□□ -1.2
TMOD3-207ENST00000560549 LZTS3O60299 673 aaPredicted RBP7.57□□□□□ -1.2
TMOD3-207ENST00000560549 RIPOR1Q6ZS17 1223 aa7.57□□□□□ -1.2
TMOD3-207ENST00000560549 RHBDD1Q8TEB9 315 aa7.57□□□□□ -1.2
TMOD3-207ENST00000560549 SLC4A9Q96Q91 983 aa7.57□□□□□ -1.2
TMOD3-207ENST00000560549 GAS2L1Q99501 681 aaPredicted RBP7.57□□□□□ -1.2
TMOD3-207ENST00000560549 C1orf115Q9H7X2 142 aa7.57□□□□□ -1.2
TMOD3-207ENST00000560549 MBIPQ9NS73 344 aa7.57□□□□□ -1.2
TMOD3-207ENST00000560549 TFIP11Q9UBB9 837 aaKnown RBP7.57□□□□□ -1.2
TMOD3-207ENST00000560549 IQSEC3Q9UPP2 1182 aaPredicted RBP7.57□□□□□ -1.2
TMOD3-207ENST00000560549 MAFBQ9Y5Q3 323 aaPredicted RBP7.57□□□□□ -1.2
TMOD3-207ENST00000560549 MYO15BQ96JP2 1530 aa7.57□□□□□ -1.2
TMOD3-207ENST00000560549 PALM3A6NDB9 673 aaPredicted RBP7.56□□□□□ -1.2
TMOD3-207ENST00000560549 GPR25O00155 361 aa7.56□□□□□ -1.2
TMOD3-207ENST00000560549 DKK1O94907 266 aa7.56□□□□□ -1.2
TMOD3-207ENST00000560549 KCNMA1Q12791 1236 aa7.56□□□□□ -1.2
TMOD3-207ENST00000560549 LBRQ14739 615 aaKnown RBP7.56□□□□□ -1.2
TMOD3-207ENST00000560549 MTFR1Q15390 333 aa7.56□□□□□ -1.2
TMOD3-207ENST00000560549 GNASQ5JWF2 1037 aa7.56□□□□□ -1.2
TMOD3-207ENST00000560549 GTPBP3Q969Y2 492 aaKnown RBP7.56□□□□□ -1.2
TMOD3-207ENST00000560549 ZNF358Q9NW07 568 aa7.56□□□□□ -1.2
TMOD3-207ENST00000560549 ZNF777Q9ULD5 760 aaPredicted RBP7.56□□□□□ -1.2
TMOD3-207ENST00000560549 ADAMTS8Q9UP79 889 aa7.56□□□□□ -1.2
TMOD3-207ENST00000560549 SMTNP53814 917 aa7.55□□□□□ -1.2
TMOD3-207ENST00000560549 EPHA4P54764 986 aa7.55□□□□□ -1.2
TMOD3-207ENST00000560549 TMEM214Q6NUQ4 689 aaKnown RBP7.55□□□□□ -1.2
TMOD3-207ENST00000560549 CALR3Q96L12 384 aaKnown RBP7.55□□□□□ -1.2
TMOD3-207ENST00000560549 NUCKS1Q9H1E3 243 aaKnown RBP7.55□□□□□ -1.2
TMOD3-207ENST00000560549 GPAMQ9HCL2 828 aa7.55□□□□□ -1.2
TMOD3-207ENST00000560549 FOXR1Q6PIV2 292 aa7.55□□□□□ -1.2
TMOD3-207ENST00000560549 LYPD4Q6UWN0 246 aa7.55□□□□□ -1.2
TMOD3-207ENST00000560549 HOMEZQ8IX15 550 aa7.55□□□□□ -1.2
TMOD3-207ENST00000560549 SVOPQ8N4V2 548 aa7.55□□□□□ -1.2
TMOD3-207ENST00000560549 PPP1R12CQ9BZL4 782 aa7.55□□□□□ -1.2
TMOD3-207ENST00000560549 MKRN1Q9UHC7 482 aaKnown RBP7.55□□□□□ -1.2
TMOD3-207ENST00000560549 DCAF1Q9Y4B6 1507 aa7.54□□□□□ -1.2
TMOD3-207ENST00000560549 A6NJY4 79 aa7.54□□□□□ -1.2
TMOD3-207ENST00000560549 PLA2G4AP47712 749 aa7.54□□□□□ -1.2
TMOD3-207ENST00000560549 OGFOD1Q8N543 542 aa7.54□□□□□ -1.2
TMOD3-207ENST00000560549 TPCN2Q8NHX9 752 aa7.54□□□□□ -1.2
TMOD3-207ENST00000560549 CFHR5Q9BXR6 569 aa7.54□□□□□ -1.2
TMOD3-207ENST00000560549 CRISPLD1Q9H336 500 aa7.54□□□□□ -1.2
TMOD3-207ENST00000560549 IGF1RP08069 1367 aa7.53□□□□□ -1.2
TMOD3-207ENST00000560549 CELA2BP08218 269 aaPredicted RBP7.53□□□□□ -1.2
TMOD3-207ENST00000560549 ATP4AP20648 1035 aa7.53□□□□□ -1.2
TMOD3-207ENST00000560549 MSX1P28360 303 aa7.53□□□□□ -1.2
TMOD3-207ENST00000560549 PSME1Q06323 249 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms