RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 SPATA31A1Q5TZJ5 1347 aa10.92□□□□□ -0.66
LRRC28-219ENST00000560483 ZEB1P37275 1124 aaPredicted RBP10.92□□□□□ -0.66
LRRC28-219ENST00000560483 PDE3BQ13370 1112 aa10.92□□□□□ -0.66
LRRC28-219ENST00000560483 SF3B2Q13435 895 aaKnown RBP10.92□□□□□ -0.66
LRRC28-219ENST00000560483 ANKRD24Q8TF21 1146 aa10.92□□□□□ -0.66
LRRC28-219ENST00000560483 COL5A2P05997 1499 aaPredicted RBP10.92□□□□□ -0.66
LRRC28-219ENST00000560483 OVOS2A0A0J9YW53 1432 aa10.92□□□□□ -0.66
LRRC28-219ENST00000560483 OVOS2Q6IE36 1432 aa10.92□□□□□ -0.66
LRRC28-219ENST00000560483 NFAT5O94916 1531 aa10.91□□□□□ -0.66
LRRC28-219ENST00000560483 PTGER2P43116 358 aa10.91□□□□□ -0.66
LRRC28-219ENST00000560483 MORC1Q86VD1 984 aa10.91□□□□□ -0.66
LRRC28-219ENST00000560483 PCDHGA4Q9Y5G9 962 aa10.91□□□□□ -0.66
LRRC28-219ENST00000560483 CRB1P82279 1406 aa10.91□□□□□ -0.66
LRRC28-219ENST00000560483 MAP3K19Q56UN5 1328 aa10.9□□□□□ -0.66
LRRC28-219ENST00000560483 WDR17Q8IZU2 1322 aa10.9□□□□□ -0.66
LRRC28-219ENST00000560483 LMO7Q8WWI1 1683 aa10.9□□□□□ -0.66
LRRC28-219ENST00000560483 BRWD3Q6RI45 1802 aa10.9□□□□□ -0.66
LRRC28-219ENST00000560483 SMG6Q86US8 1419 aaKnown RBP10.9□□□□□ -0.66
LRRC28-219ENST00000560483 USP54Q70EL1 1684 aa10.89□□□□□ -0.67
LRRC28-219ENST00000560483 CC2D1BQ5T0F9 858 aaKnown RBP10.89□□□□□ -0.67
LRRC28-219ENST00000560483 FAM182BQ5T319 152 aa10.89□□□□□ -0.67
LRRC28-219ENST00000560483 IP6K1Q92551 441 aa10.89□□□□□ -0.67
LRRC28-219ENST00000560483 THRAP3Q9Y2W1 955 aaKnown RBP10.89□□□□□ -0.67
LRRC28-219ENST00000560483 CCDC7Q96M83 1385 aa10.89□□□□□ -0.67
LRRC28-219ENST00000560483 KAT6BQ8WYB5 2073 aa10.88□□□□□ -0.67
LRRC28-219ENST00000560483 STK25O00506 426 aa10.88□□□□□ -0.67
LRRC28-219ENST00000560483 PPP1R37O75864 691 aa10.88□□□□□ -0.67
LRRC28-219ENST00000560483 HOXC9P31274 260 aa10.88□□□□□ -0.67
LRRC28-219ENST00000560483 DDB1Q16531 1140 aa10.88□□□□□ -0.67
LRRC28-219ENST00000560483 UPF1Q92900 1129 aaKnown RBP eCLIP10.88□□□□□ -0.67
LRRC28-219ENST00000560483 COL18A1P39060 1754 aa10.88□□□□□ -0.67
LRRC28-219ENST00000560483 WASHC2AQ641Q2 1341 aa10.87□□□□□ -0.67
LRRC28-219ENST00000560483 BARGINQ6ZT62 677 aa10.87□□□□□ -0.67
LRRC28-219ENST00000560483 CARD10Q9BWT7 1032 aa10.87□□□□□ -0.67
LRRC28-219ENST00000560483 EMILIN1Q9Y6C2 1016 aa10.87□□□□□ -0.67
LRRC28-219ENST00000560483 MAP2P11137 1827 aaKnown RBP10.86□□□□□ -0.67
LRRC28-219ENST00000560483 BLMP54132 1417 aaPredicted RBP10.86□□□□□ -0.67
LRRC28-219ENST00000560483 CDCA7Q9BWT1 371 aaPredicted RBP10.86□□□□□ -0.67
LRRC28-219ENST00000560483 ABCC6O95255 1503 aa10.85□□□□□ -0.67
LRRC28-219ENST00000560483 EXOC5O00471 708 aa10.85□□□□□ -0.67
LRRC28-219ENST00000560483 ONECUT3O60422 494 aaPredicted RBP10.85□□□□□ -0.67
LRRC28-219ENST00000560483 IL2RBP14784 551 aa10.85□□□□□ -0.67
LRRC28-219ENST00000560483 HSP90AB2PQ58FF8 381 aa10.85□□□□□ -0.67
LRRC28-219ENST00000560483 USHBP1Q8N6Y0 703 aa10.85□□□□□ -0.67
LRRC28-219ENST00000560483 RTL1A6NKG5 1358 aa10.85□□□□□ -0.67
LRRC28-219ENST00000560483 NSD2O96028 1365 aa10.85□□□□□ -0.67
LRRC28-219ENST00000560483 FLT4P35916 1363 aa10.85□□□□□ -0.67
LRRC28-219ENST00000560483 EP400Q96L91 3159 aa10.85□□□□□ -0.67
LRRC28-219ENST00000560483 ANKRD26Q9UPS8 1709 aa10.84□□□□□ -0.67
LRRC28-219ENST00000560483 RGL2O15211 777 aa10.83□□□□□ -0.68
LRRC28-219ENST00000560483 DMRTA1Q5VZB9 504 aa10.83□□□□□ -0.68
LRRC28-219ENST00000560483 FAM196AQ6ZSG2 479 aa10.83□□□□□ -0.68
LRRC28-219ENST00000560483 RAPGEF4Q8WZA2 1011 aa10.83□□□□□ -0.68
LRRC28-219ENST00000560483 THSD7AQ9UPZ6 1657 aa10.82□□□□□ -0.68
LRRC28-219ENST00000560483 TRIM37O94972 964 aa10.82□□□□□ -0.68
LRRC28-219ENST00000560483 CCDC125Q86Z20 511 aa10.82□□□□□ -0.68
LRRC28-219ENST00000560483 DDX54Q8TDD1 881 aaKnown RBP10.82□□□□□ -0.68
LRRC28-219ENST00000560483 RGPD2P0DJD1 1756 aa10.82□□□□□ -0.68
LRRC28-219ENST00000560483 FAM208AQ9UK61 1670 aaKnown RBP10.82□□□□□ -0.68
LRRC28-219ENST00000560483 INSRP06213 1382 aa10.81□□□□□ -0.68
LRRC28-219ENST00000560483 SLC34A2O95436 690 aa10.81□□□□□ -0.68
LRRC28-219ENST00000560483 TATP17735 454 aaPredicted RBP10.81□□□□□ -0.68
LRRC28-219ENST00000560483 PBX2P40425 430 aa10.81□□□□□ -0.68
LRRC28-219ENST00000560483 BAG6P46379 1132 aa10.81□□□□□ -0.68
LRRC28-219ENST00000560483 ADGRD1Q6QNK2 874 aa10.81□□□□□ -0.68
LRRC28-219ENST00000560483 PLA2G2EQ9NZK7 142 aa10.81□□□□□ -0.68
LRRC28-219ENST00000560483 POLKQ9UBT6 870 aa10.81□□□□□ -0.68
LRRC28-219ENST00000560483 WNK3Q9BYP7 1800 aa10.81□□□□□ -0.68
LRRC28-219ENST00000560483 PARP4Q9UKK3 1724 aaKnown RBP10.81□□□□□ -0.68
LRRC28-219ENST00000560483 PSEN2P49810 448 aa10.8□□□□□ -0.68
LRRC28-219ENST00000560483 AMER1Q5JTC6 1135 aaPredicted RBP10.8□□□□□ -0.68
LRRC28-219ENST00000560483 NBPF6Q5VWK0 638 aa10.8□□□□□ -0.68
LRRC28-219ENST00000560483 NBPF4Q96M43 638 aa10.8□□□□□ -0.68
LRRC28-219ENST00000560483 PEAK1Q9H792 1746 aa10.8□□□□□ -0.68
LRRC28-219ENST00000560483 LRRC37A3O60309 1634 aa10.8□□□□□ -0.68
LRRC28-219ENST00000560483 KIF24Q5T7B8 1368 aa10.79□□□□□ -0.68
LRRC28-219ENST00000560483 OVOS2A0A0G2JMS6 1433 aa10.79□□□□□ -0.68
LRRC28-219ENST00000560483 APBA3O96018 575 aa10.79□□□□□ -0.68
LRRC28-219ENST00000560483 DDX10Q13206 875 aaKnown RBP10.79□□□□□ -0.68
LRRC28-219ENST00000560483 DEFB132Q7Z7B7 95 aa10.79□□□□□ -0.68
LRRC28-219ENST00000560483 SYTL4Q96C24 671 aaPredicted RBP10.79□□□□□ -0.68
LRRC28-219ENST00000560483 ECM2O94769 699 aaPredicted RBP10.78□□□□□ -0.68
LRRC28-219ENST00000560483 ZCRB1Q8TBF4 217 aaKnown RBP10.78□□□□□ -0.68
LRRC28-219ENST00000560483 ACSBG1Q96GR2 724 aa10.78□□□□□ -0.68
LRRC28-219ENST00000560483 RGPD1P0DJD0 1748 aa10.78□□□□□ -0.68
LRRC28-219ENST00000560483 TNS2Q63HR2 1409 aa10.77□□□□□ -0.68
LRRC28-219ENST00000560483 MTHFSP49914 203 aa10.77□□□□□ -0.69
LRRC28-219ENST00000560483 EN1Q05925 392 aaPredicted RBP10.77□□□□□ -0.69
LRRC28-219ENST00000560483 EIF4A2Q14240 407 aaKnown RBP10.77□□□□□ -0.69
LRRC28-219ENST00000560483 MARCH10Q8NA82 808 aaPredicted RBP10.77□□□□□ -0.69
LRRC28-219ENST00000560483 U2SURPO15042 1029 aaKnown RBP10.76□□□□□ -0.69
LRRC28-219ENST00000560483 PER1O15534 1290 aaPredicted RBP10.76□□□□□ -0.69
LRRC28-219ENST00000560483 TMC2Q8TDI7 906 aa10.76□□□□□ -0.69
LRRC28-219ENST00000560483 CFAP53Q96M91 514 aa10.76□□□□□ -0.69
LRRC28-219ENST00000560483 EYA1Q99502 592 aa10.76□□□□□ -0.69
LRRC28-219ENST00000560483 DISP2A7MBM2 1401 aa10.75□□□□□ -0.69
LRRC28-219ENST00000560483 MEGF6O75095 1541 aa10.74□□□□□ -0.69
LRRC28-219ENST00000560483 HRO43593 1189 aa10.74□□□□□ -0.69
LRRC28-219ENST00000560483 DIAPH1O60610 1272 aaKnown RBP10.74□□□□□ -0.69
LRRC28-219ENST00000560483 SPG7Q9UQ90 795 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms