RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 GDF2Q9UK05 429 aaPredicted RBP7.67□□□□□ -1.18
SPG11-222ENST00000560435 ZNF330Q9Y3S2 320 aaPredicted RBP7.67□□□□□ -1.18
SPG11-222ENST00000560435 A0A1B0GTH6 734 aa7.66□□□□□ -1.18
SPG11-222ENST00000560435 BAG6P46379 1132 aa7.66□□□□□ -1.18
SPG11-222ENST00000560435 LBRQ14739 615 aaKnown RBP7.66□□□□□ -1.18
SPG11-222ENST00000560435 CNKSR1Q969H4 720 aa7.66□□□□□ -1.18
SPG11-222ENST00000560435 GPAMQ9HCL2 828 aa7.66□□□□□ -1.18
SPG11-222ENST00000560435 RAB6BQ9NRW1 208 aa7.66□□□□□ -1.18
SPG11-222ENST00000560435 IL2RAP01589 272 aa7.65□□□□□ -1.18
SPG11-222ENST00000560435 CENPCQ03188 943 aa7.65□□□□□ -1.18
SPG11-222ENST00000560435 UBAP2LQ14157 1087 aaKnown RBP7.65□□□□□ -1.18
SPG11-222ENST00000560435 C1orf229Q6ZS94 237 aaPredicted RBP7.65□□□□□ -1.18
SPG11-222ENST00000560435 COL8A1P27658 744 aa7.64□□□□□ -1.19
SPG11-222ENST00000560435 GOLGA6L1Q8N7Z2 621 aa7.64□□□□□ -1.19
SPG11-222ENST00000560435 EDARADDQ8WWZ3 215 aa7.64□□□□□ -1.19
SPG11-222ENST00000560435 ZSCAN10Q96SZ4 725 aaPredicted RBP7.64□□□□□ -1.19
SPG11-222ENST00000560435 HRH3Q9Y5N1 445 aa7.64□□□□□ -1.19
SPG11-222ENST00000560435 RRAGCQ9HB90 399 aa7.63□□□□□ -1.19
SPG11-222ENST00000560435 SOCS7O14512 581 aa7.62□□□□□ -1.19
SPG11-222ENST00000560435 GPR37L1O60883 481 aa7.62□□□□□ -1.19
SPG11-222ENST00000560435 PHKA2P46019 1235 aa7.62□□□□□ -1.19
SPG11-222ENST00000560435 GNASQ5JWF2 1037 aa7.62□□□□□ -1.19
SPG11-222ENST00000560435 XAGE2Q96GT9 111 aa7.62□□□□□ -1.19
SPG11-222ENST00000560435 FHDC1Q9C0D6 1143 aaPredicted RBP7.62□□□□□ -1.19
SPG11-222ENST00000560435 ATXN7L1Q9ULK2 861 aaPredicted RBP7.62□□□□□ -1.19
SPG11-222ENST00000560435 MYCP01106 439 aaPredicted RBP7.61□□□□□ -1.19
SPG11-222ENST00000560435 CSB-PGBD3P0DP91 1061 aa7.61□□□□□ -1.19
SPG11-222ENST00000560435 HOXB4P17483 251 aaPredicted RBP7.61□□□□□ -1.19
SPG11-222ENST00000560435 GTF2E1P29083 439 aaPredicted RBP7.61□□□□□ -1.19
SPG11-222ENST00000560435 SLCO4C1Q6ZQN7 724 aa7.61□□□□□ -1.19
SPG11-222ENST00000560435 PGBD3Q8N328 593 aa7.61□□□□□ -1.19
SPG11-222ENST00000560435 PIK3R2O00459 728 aa7.6□□□□□ -1.19
SPG11-222ENST00000560435 BMP4P12644 408 aa7.6□□□□□ -1.19
SPG11-222ENST00000560435 MSX1P28360 303 aa7.6□□□□□ -1.19
SPG11-222ENST00000560435 C4orf17Q53FE4 359 aa7.6□□□□□ -1.19
SPG11-222ENST00000560435 EFHC2Q5JST6 749 aa7.6□□□□□ -1.19
SPG11-222ENST00000560435 TMEM214Q6NUQ4 689 aaKnown RBP7.6□□□□□ -1.19
SPG11-222ENST00000560435 LINC00114Q6XXX2 140 aa7.6□□□□□ -1.19
SPG11-222ENST00000560435 RUBCNLQ9H714 662 aa7.6□□□□□ -1.19
SPG11-222ENST00000560435 NDFIP2Q9NV92 336 aa7.6□□□□□ -1.19
SPG11-222ENST00000560435 C2CD2LO14523 706 aa7.59□□□□□ -1.19
SPG11-222ENST00000560435 FURINP09958 794 aa7.59□□□□□ -1.19
SPG11-222ENST00000560435 GRIN2CQ14957 1233 aa7.59□□□□□ -1.19
SPG11-222ENST00000560435 ESCO1Q5FWF5 840 aa7.59□□□□□ -1.19
SPG11-222ENST00000560435 NDUFB9Q9Y6M9 179 aa7.59□□□□□ -1.19
SPG11-222ENST00000560435 GNB5O14775 395 aa7.58□□□□□ -1.2
SPG11-222ENST00000560435 FGFR3P22607 806 aa7.58□□□□□ -1.2
SPG11-222ENST00000560435 AMPD1P23109 780 aa7.58□□□□□ -1.2
SPG11-222ENST00000560435 Q8N3U1 123 aa7.58□□□□□ -1.2
SPG11-222ENST00000560435 BANK1Q8NDB2 785 aa7.58□□□□□ -1.2
SPG11-222ENST00000560435 ABHD17AQ96GS6 310 aa7.58□□□□□ -1.2
SPG11-222ENST00000560435 CCDC85AQ96PX6 553 aaPredicted RBP7.58□□□□□ -1.2
SPG11-222ENST00000560435 CDCA7Q9BWT1 371 aaPredicted RBP7.58□□□□□ -1.2
SPG11-222ENST00000560435 CRISPLD1Q9H336 500 aa7.58□□□□□ -1.2
SPG11-222ENST00000560435 SUV39H2Q9H5I1 410 aa7.58□□□□□ -1.2
SPG11-222ENST00000560435 GGA1Q9UJY5 639 aa7.58□□□□□ -1.2
SPG11-222ENST00000560435 RHBDD1Q8TEB9 315 aa7.57□□□□□ -1.2
SPG11-222ENST00000560435 CEP126Q9P2H0 1117 aa7.57□□□□□ -1.2
SPG11-222ENST00000560435 BNIP3LO60238 219 aa7.56□□□□□ -1.2
SPG11-222ENST00000560435 ARAFP10398 606 aa7.56□□□□□ -1.2
SPG11-222ENST00000560435 EPXP11678 715 aa7.56□□□□□ -1.2
SPG11-222ENST00000560435 CTBSQ01459 385 aa7.56□□□□□ -1.2
SPG11-222ENST00000560435 MTMR14Q8NCE2 650 aa7.56□□□□□ -1.2
SPG11-222ENST00000560435 C1QTNF9BB2RNN3 333 aa7.55□□□□□ -1.2
SPG11-222ENST00000560435 APBB1O00213 710 aa7.55□□□□□ -1.2
SPG11-222ENST00000560435 DGKGP49619 791 aa7.55□□□□□ -1.2
SPG11-222ENST00000560435 PPARGC1BQ86YN6 1023 aaKnown RBP7.55□□□□□ -1.2
SPG11-222ENST00000560435 BTBD6Q96KE9 485 aa7.55□□□□□ -1.2
SPG11-222ENST00000560435 FIGNL1Q6PIW4 674 aa7.54□□□□□ -1.2
SPG11-222ENST00000560435 RNF135Q8IUD6 432 aa7.54□□□□□ -1.2
SPG11-222ENST00000560435 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
SPG11-222ENST00000560435 ETNK1Q9HBU6 452 aa7.54□□□□□ -1.2
SPG11-222ENST00000560435 NOP53Q9NZM5 478 aaKnown RBP7.54□□□□□ -1.2
SPG11-222ENST00000560435 TLR1Q15399 786 aa7.53□□□□□ -1.2
SPG11-222ENST00000560435 CD163Q86VB7 1156 aa7.53□□□□□ -1.2
SPG11-222ENST00000560435 DNAAF2Q9NVR5 837 aaKnown RBP7.53□□□□□ -1.2
SPG11-222ENST00000560435 USP4Q13107 963 aa7.52□□□□□ -1.21
SPG11-222ENST00000560435 TBC1D9Q6ZT07 1266 aa7.52□□□□□ -1.21
SPG11-222ENST00000560435 C1orf216Q8TAB5 229 aa7.52□□□□□ -1.21
SPG11-222ENST00000560435 DOLKQ9UPQ8 538 aa7.52□□□□□ -1.21
SPG11-222ENST00000560435 PCDHGC4Q9Y5F7 938 aa7.52□□□□□ -1.21
SPG11-222ENST00000560435 NEURL1BA8MQ27 555 aa7.51□□□□□ -1.21
SPG11-222ENST00000560435 CHRNA4P43681 627 aa7.51□□□□□ -1.21
SPG11-222ENST00000560435 PLA2G4AP47712 749 aa7.51□□□□□ -1.21
SPG11-222ENST00000560435 NLRP8Q86W28 1048 aa7.51□□□□□ -1.21
SPG11-222ENST00000560435 IL27Q8NEV9 243 aa7.51□□□□□ -1.21
SPG11-222ENST00000560435 ZCCHC2Q9C0B9 1178 aaKnown RBP7.51□□□□□ -1.21
SPG11-222ENST00000560435 STAU1O95793 577 aaKnown RBP7.5□□□□□ -1.21
SPG11-222ENST00000560435 ATP4AP20648 1035 aa7.5□□□□□ -1.21
SPG11-222ENST00000560435 CHSY3Q70JA7 882 aa7.5□□□□□ -1.21
SPG11-222ENST00000560435 PHTF2Q8N3S3 785 aa7.5□□□□□ -1.21
SPG11-222ENST00000560435 AVENQ9NQS1 362 aaPredicted RBP7.5□□□□□ -1.21
SPG11-222ENST00000560435 ADH6P28332 368 aa7.49□□□□□ -1.21
SPG11-222ENST00000560435 TSGA10IPQ3SY00 556 aa7.49□□□□□ -1.21
SPG11-222ENST00000560435 FAM182BQ5T319 152 aa7.49□□□□□ -1.21
SPG11-222ENST00000560435 SNRKQ9NRH2 765 aa7.49□□□□□ -1.21
SPG11-222ENST00000560435 ATXN7O15265 892 aaPredicted RBP7.48□□□□□ -1.21
SPG11-222ENST00000560435 ITGB7P26010 798 aa7.48□□□□□ -1.21
SPG11-222ENST00000560435 NEUROD2Q15784 382 aa7.48□□□□□ -1.21
SPG11-222ENST00000560435 SIRT1Q96EB6 747 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms