RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 ITPK1Q13572 414 aa19.75■□□□□ 0.75
PSME1-207ENST00000560420 AMIGO3Q86WK7 504 aa19.75■□□□□ 0.75
PSME1-207ENST00000560420 CFAP53Q96M91 514 aa19.75■□□□□ 0.75
PSME1-207ENST00000560420 U2SURPO15042 1029 aaKnown RBP19.74■□□□□ 0.75
PSME1-207ENST00000560420 LINC00116Q8NCU8 138 aa19.74■□□□□ 0.75
PSME1-207ENST00000560420 SLC16A10Q8TF71 515 aa19.74■□□□□ 0.75
PSME1-207ENST00000560420 RNMTO43148 476 aaKnown RBP19.73■□□□□ 0.75
PSME1-207ENST00000560420 LGR6Q9HBX8 967 aa19.73■□□□□ 0.75
PSME1-207ENST00000560420 TFCP2L1Q9NZI6 479 aa19.73■□□□□ 0.75
PSME1-207ENST00000560420 HMGB2P26583 209 aaKnown RBP19.72■□□□□ 0.75
PSME1-207ENST00000560420 CABP4P57796 275 aa19.72■□□□□ 0.75
PSME1-207ENST00000560420 TJP1Q07157 1748 aa19.72■□□□□ 0.75
PSME1-207ENST00000560420 COL23A1Q86Y22 540 aaPredicted RBP19.72■□□□□ 0.75
PSME1-207ENST00000560420 ATF5Q9Y2D1 282 aaPredicted RBP19.72■□□□□ 0.75
PSME1-207ENST00000560420 SIPA1L3O60292 1781 aaPredicted RBP19.72■□□□□ 0.75
PSME1-207ENST00000560420 ZEB1P37275 1124 aaPredicted RBP19.71■□□□□ 0.75
PSME1-207ENST00000560420 NFATC2IPQ8NCF5 419 aa19.71■□□□□ 0.75
PSME1-207ENST00000560420 SLC52A2Q9HAB3 445 aa19.71■□□□□ 0.75
PSME1-207ENST00000560420 KCPQ6ZWJ8 1503 aa19.71■□□□□ 0.75
PSME1-207ENST00000560420 MAP3K5Q99683 1374 aa19.7■□□□□ 0.74
PSME1-207ENST00000560420 UBR2Q8IWV8 1755 aa19.7■□□□□ 0.74
PSME1-207ENST00000560420 DDX10Q13206 875 aaKnown RBP19.7■□□□□ 0.74
PSME1-207ENST00000560420 PHACTR3Q96KR7 559 aa19.7■□□□□ 0.74
PSME1-207ENST00000560420 CEMIPQ8WUJ3 1361 aa19.7■□□□□ 0.74
PSME1-207ENST00000560420 PRKAR2BP31323 418 aa19.69■□□□□ 0.74
PSME1-207ENST00000560420 GAS2L2Q8NHY3 880 aa19.69■□□□□ 0.74
PSME1-207ENST00000560420 NUDCQ9Y266 331 aa19.69■□□□□ 0.74
PSME1-207ENST00000560420 FCHSD2O94868 740 aa19.68■□□□□ 0.74
PSME1-207ENST00000560420 ATP6V1AP38606 617 aa19.68■□□□□ 0.74
PSME1-207ENST00000560420 RALBP1Q15311 655 aa19.68■□□□□ 0.74
PSME1-207ENST00000560420 MYH14Q7Z406 1995 aaKnown RBP19.67■□□□□ 0.74
PSME1-207ENST00000560420 FLAD1Q8NFF5 587 aa19.66■□□□□ 0.74
PSME1-207ENST00000560420 IL17REQ8NFR9 667 aa19.66■□□□□ 0.74
PSME1-207ENST00000560420 CNTNAP4Q9C0A0 1308 aa19.66■□□□□ 0.74
PSME1-207ENST00000560420 U2AF1L5P0DN76 240 aaPredicted RBP19.65■□□□□ 0.74
PSME1-207ENST00000560420 SSFA2P28290 1259 aa19.65■□□□□ 0.74
PSME1-207ENST00000560420 U2AF1Q01081 240 aaKnown RBP eCLIP19.65■□□□□ 0.74
PSME1-207ENST00000560420 RC3H1Q5TC82 1133 aaKnown RBP19.65■□□□□ 0.74
PSME1-207ENST00000560420 AK7Q96M32 723 aa19.65■□□□□ 0.74
PSME1-207ENST00000560420 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.64■□□□□ 0.73
PSME1-207ENST00000560420 GNAT3A8MTJ3 354 aa19.64■□□□□ 0.73
PSME1-207ENST00000560420 PPP1R1BQ9UD71 204 aaPredicted RBP19.64■□□□□ 0.73
PSME1-207ENST00000560420 SMIM5Q71RC9 77 aa19.63■□□□□ 0.73
PSME1-207ENST00000560420 PLEKHF1Q96S99 279 aa19.63■□□□□ 0.73
PSME1-207ENST00000560420 RBM42Q9BTD8 480 aaKnown RBP19.63■□□□□ 0.73
PSME1-207ENST00000560420 ARXQ96QS3 562 aa19.62■□□□□ 0.73
PSME1-207ENST00000560420 C4AP0C0L4 1744 aa19.62■□□□□ 0.73
PSME1-207ENST00000560420 MYBBP1AQ9BQG0 1328 aaKnown RBP19.61■□□□□ 0.73
PSME1-207ENST00000560420 GNPATO15228 680 aa19.61■□□□□ 0.73
PSME1-207ENST00000560420 PTCD1O75127 700 aaKnown RBP19.61■□□□□ 0.73
PSME1-207ENST00000560420 SLC39A6Q13433 755 aa19.61■□□□□ 0.73
PSME1-207ENST00000560420 FHDC1Q9C0D6 1143 aaPredicted RBP19.61■□□□□ 0.73
PSME1-207ENST00000560420 UTRNP46939 3433 aa19.6■□□□□ 0.73
PSME1-207ENST00000560420 SYT17Q9BSW7 474 aa19.6■□□□□ 0.73
PSME1-207ENST00000560420 RPS6KA4O75676 772 aa19.58■□□□□ 0.72
PSME1-207ENST00000560420 PHF14O94880 888 aa19.58■□□□□ 0.72
PSME1-207ENST00000560420 DLG5Q8TDM6 1919 aa19.58■□□□□ 0.72
PSME1-207ENST00000560420 GOLGB1Q14789 3259 aaKnown RBP19.57■□□□□ 0.72
PSME1-207ENST00000560420 HTATSF1O43719 755 aaKnown RBP19.57■□□□□ 0.72
PSME1-207ENST00000560420 ADRA2BP18089 450 aa19.57■□□□□ 0.72
PSME1-207ENST00000560420 POLD1P28340 1107 aa19.57■□□□□ 0.72
PSME1-207ENST00000560420 CRKLP46109 303 aaKnown RBP19.57■□□□□ 0.72
PSME1-207ENST00000560420 INTS5Q6P9B9 1019 aaKnown RBP19.57■□□□□ 0.72
PSME1-207ENST00000560420 VSIG10Q8N0Z9 540 aa19.57■□□□□ 0.72
PSME1-207ENST00000560420 PRKRIP1Q9H875 184 aaPredicted RBP19.57■□□□□ 0.72
PSME1-207ENST00000560420 MSL1Q68DK7 614 aa19.56■□□□□ 0.72
PSME1-207ENST00000560420 DNAJC10Q8IXB1 793 aa19.56■□□□□ 0.72
PSME1-207ENST00000560420 RTCBQ9Y3I0 505 aaKnown RBP19.56■□□□□ 0.72
PSME1-207ENST00000560420 CYP19A1P11511 503 aaPredicted RBP19.55■□□□□ 0.72
PSME1-207ENST00000560420 ZNF790Q6PG37 636 aa19.55■□□□□ 0.72
PSME1-207ENST00000560420 MSH5O43196 834 aa19.54■□□□□ 0.72
PSME1-207ENST00000560420 TEFQ10587 303 aa19.54■□□□□ 0.72
PSME1-207ENST00000560420 ARHGEF1Q92888 912 aaKnown RBP19.54■□□□□ 0.72
PSME1-207ENST00000560420 HEG1Q9ULI3 1381 aa19.54■□□□□ 0.72
PSME1-207ENST00000560420 ZNF496Q96IT1 587 aaPredicted RBP19.53■□□□□ 0.72
PSME1-207ENST00000560420 SOS1Q07889 1333 aaPredicted RBP19.52■□□□□ 0.72
PSME1-207ENST00000560420 TRAPPC3LQ5T215 181 aa19.52■□□□□ 0.72
PSME1-207ENST00000560420 MCM10Q7L590 875 aa19.52■□□□□ 0.72
PSME1-207ENST00000560420 KCNQ3O43525 872 aa19.51■□□□□ 0.71
PSME1-207ENST00000560420 GYS1P13807 737 aa19.51■□□□□ 0.71
PSME1-207ENST00000560420 DCTN1Q14203 1278 aa19.51■□□□□ 0.71
PSME1-207ENST00000560420 NFE2L2Q16236 605 aa19.51■□□□□ 0.71
PSME1-207ENST00000560420 CCDC87Q9NVE4 849 aa19.51■□□□□ 0.71
PSME1-207ENST00000560420 KIF13BQ9NQT8 1826 aa19.5■□□□□ 0.71
PSME1-207ENST00000560420 USP42Q9H9J4 1324 aaKnown RBP19.5■□□□□ 0.71
PSME1-207ENST00000560420 KDM3BQ7LBC6 1761 aa19.49■□□□□ 0.71
PSME1-207ENST00000560420 NLGN2Q8NFZ4 835 aa19.49■□□□□ 0.71
PSME1-207ENST00000560420 ZBTB1Q9Y2K1 713 aa19.49■□□□□ 0.71
PSME1-207ENST00000560420 KIAA1551Q9HCM1 1747 aa19.48■□□□□ 0.71
PSME1-207ENST00000560420 BTBD11A6QL63 1104 aa19.48■□□□□ 0.71
PSME1-207ENST00000560420 TTC5Q8N0Z6 440 aa19.48■□□□□ 0.71
PSME1-207ENST00000560420 RTF1Q92541 710 aaKnown RBP19.48■□□□□ 0.71
PSME1-207ENST00000560420 ZNF316A6NFI3 1004 aaPredicted RBP19.47■□□□□ 0.71
PSME1-207ENST00000560420 PNNQ9H307 717 aaKnown RBP19.47■□□□□ 0.71
PSME1-207ENST00000560420 CD2APQ9Y5K6 639 aa19.47■□□□□ 0.71
PSME1-207ENST00000560420 COL15A1P39059 1388 aa19.46■□□□□ 0.71
PSME1-207ENST00000560420 FMNL2Q96PY5 1086 aa19.46■□□□□ 0.71
PSME1-207ENST00000560420 SRP68Q9UHB9 627 aaKnown RBP19.46■□□□□ 0.71
PSME1-207ENST00000560420 C10orf71Q711Q0 1435 aa19.45■□□□□ 0.7
PSME1-207ENST00000560420 MMP10P09238 476 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms