RNA–Protein interactions for RNA: ENST00000560329.1

NPM1P42-201, Transcript of nucleophosmin 1 pseudogene 42, humanhuman

BASIC

Gene NPM1P42, Length 862 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P42-201ENST00000560329 PCMTD1Q96MG8 357 aaPredicted RBP7.59□□□□□ -1.19
NPM1P42-201ENST00000560329 KRTAP3-3Q9BYR6 98 aa7.59□□□□□ -1.19
NPM1P42-201ENST00000560329 KRTAP3-2Q9BYR7 98 aa7.59□□□□□ -1.19
NPM1P42-201ENST00000560329 RWDD1Q9H446 243 aaPredicted RBP7.59□□□□□ -1.19
NPM1P42-201ENST00000560329 UPF2Q9HAU5 1272 aaKnown RBP7.59□□□□□ -1.19
NPM1P42-201ENST00000560329 TRAK1Q9UPV9 953 aa7.59□□□□□ -1.19
NPM1P42-201ENST00000560329 STRCQ7RTU9 1775 aa7.59□□□□□ -1.2
NPM1P42-201ENST00000560329 CDC42BPGQ6DT37 1551 aa7.59□□□□□ -1.2
NPM1P42-201ENST00000560329 COL3A1P02461 1466 aaPredicted RBP7.58□□□□□ -1.2
NPM1P42-201ENST00000560329 RCCD1A6NED2 376 aa7.58□□□□□ -1.2
NPM1P42-201ENST00000560329 TRIM6-TRIM34B2RNG4 842 aa7.58□□□□□ -1.2
NPM1P42-201ENST00000560329 RGS3P49796 1198 aa7.58□□□□□ -1.2
NPM1P42-201ENST00000560329 SKIV2LQ15477 1246 aaKnown RBP7.58□□□□□ -1.2
NPM1P42-201ENST00000560329 RSPH6AQ9H0K4 717 aa7.58□□□□□ -1.2
NPM1P42-201ENST00000560329 SLC12A5Q9H2X9 1139 aa7.58□□□□□ -1.2
NPM1P42-201ENST00000560329 NLRP1Q9C000 1473 aa7.57□□□□□ -1.2
NPM1P42-201ENST00000560329 IGHDP01880 384 aa7.57□□□□□ -1.2
NPM1P42-201ENST00000560329 MTHFSP49914 203 aa7.57□□□□□ -1.2
NPM1P42-201ENST00000560329 MVPQ14764 893 aaKnown RBP7.57□□□□□ -1.2
NPM1P42-201ENST00000560329 ZKSCAN2Q63HK3 967 aa7.57□□□□□ -1.2
NPM1P42-201ENST00000560329 NUDT18Q6ZVK8 323 aa7.57□□□□□ -1.2
NPM1P42-201ENST00000560329 ZNF428Q96B54 188 aa7.57□□□□□ -1.2
NPM1P42-201ENST00000560329 TERF2IPQ9NYB0 399 aa7.57□□□□□ -1.2
NPM1P42-201ENST00000560329 USP19O94966 1318 aa7.56□□□□□ -1.2
NPM1P42-201ENST00000560329 ONECUT3O60422 494 aaPredicted RBP7.56□□□□□ -1.2
NPM1P42-201ENST00000560329 SKAP1Q86WV1 359 aa7.56□□□□□ -1.2
NPM1P42-201ENST00000560329 PANK1Q8TE04 598 aa7.56□□□□□ -1.2
NPM1P42-201ENST00000560329 TATDN2Q93075 761 aa7.56□□□□□ -1.2
NPM1P42-201ENST00000560329 KCNK17Q96T54 332 aa7.56□□□□□ -1.2
NPM1P42-201ENST00000560329 COG6Q9Y2V7 657 aa7.56□□□□□ -1.2
NPM1P42-201ENST00000560329 DLC1Q96QB1 1528 aa7.56□□□□□ -1.2
NPM1P42-201ENST00000560329 TMEM131LA2VDJ0 1609 aa7.56□□□□□ -1.2
NPM1P42-201ENST00000560329 REREQ9P2R6 1566 aa7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 NBPF26B4DH59 902 aa7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 HDAC1Q13547 482 aaPredicted RBP7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 PROX2Q3B8N5 592 aa7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 MYSM1Q5VVJ2 828 aa7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 GGT6Q6P531 493 aa7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 PACS2Q86VP3 889 aa7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 PROCA1Q8NCQ7 364 aaPredicted RBP7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 TBC1D32Q96NH3 1257 aa7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 ZMYND15Q9H091 742 aa7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 CHMP4BQ9H444 224 aaKnown RBP7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 FER1L4A9Z1Z3 1794 aa7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 A0A1W2PP64 1363 aa7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 PNPLA6Q8IY17 1366 aa7.55□□□□□ -1.2
NPM1P42-201ENST00000560329 KIF16BQ96L93 1317 aa7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 PREX1Q8TCU6 1659 aa7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 PPIP5K1Q6PFW1 1433 aa7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 YEATS2Q9ULM3 1422 aa7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 IPO8O15397 1037 aaKnown RBP7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 U2AF1L5P0DN76 240 aaPredicted RBP7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 DNAJB2P25686 324 aa7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 U2AF1Q01081 240 aaKnown RBP eCLIP7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 ALDH1L2Q3SY69 923 aa7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 TMEM132EQ6IEE7 984 aa7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 DZIP1LQ8IYY4 767 aaKnown RBP7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 FRAT1Q92837 279 aaPredicted RBP7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 TBC1D2Q9BYX2 928 aa7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 PNMA3Q9UL41 463 aa7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 DDX19BQ9UMR2 479 aa7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 ATP7BP35670 1465 aa7.54□□□□□ -1.2
NPM1P42-201ENST00000560329 YTHDC2Q9H6S0 1430 aaKnown RBP7.53□□□□□ -1.2
NPM1P42-201ENST00000560329 EIF5BO60841 1220 aaKnown RBP7.53□□□□□ -1.2
NPM1P42-201ENST00000560329 CD46P15529 392 aa7.53□□□□□ -1.2
NPM1P42-201ENST00000560329 CALD1Q05682 793 aaKnown RBP7.53□□□□□ -1.2
NPM1P42-201ENST00000560329 FLIIQ13045 1269 aa7.53□□□□□ -1.2
NPM1P42-201ENST00000560329 HDGFL2Q7Z4V5 671 aaPredicted RBP7.53□□□□□ -1.2
NPM1P42-201ENST00000560329 FTSJ3Q8IY81 847 aaKnown RBP7.53□□□□□ -1.2
NPM1P42-201ENST00000560329 PLEKHF1Q96S99 279 aa7.53□□□□□ -1.2
NPM1P42-201ENST00000560329 ZBED2Q9BTP6 218 aa7.53□□□□□ -1.2
NPM1P42-201ENST00000560329 TMEM134Q9H6X4 195 aa7.53□□□□□ -1.2
NPM1P42-201ENST00000560329 POLR3EQ9NVU0 708 aa7.53□□□□□ -1.2
NPM1P42-201ENST00000560329 PDZRN3Q9UPQ7 1066 aa7.53□□□□□ -1.2
NPM1P42-201ENST00000560329 PCDHB15Q9Y5E8 787 aa7.53□□□□□ -1.2
NPM1P42-201ENST00000560329 AGLP35573 1532 aa7.52□□□□□ -1.2
NPM1P42-201ENST00000560329 LTBP4Q8N2S1 1624 aa7.52□□□□□ -1.2
NPM1P42-201ENST00000560329 CD163L1Q9NR16 1453 aa7.52□□□□□ -1.21
NPM1P42-201ENST00000560329 RLBP1P12271 317 aa7.52□□□□□ -1.21
NPM1P42-201ENST00000560329 TMPOP42166 694 aaKnown RBP7.52□□□□□ -1.21
NPM1P42-201ENST00000560329 PSEN2P49810 448 aa7.52□□□□□ -1.21
NPM1P42-201ENST00000560329 ATF7IPQ6VMQ6 1270 aa7.52□□□□□ -1.21
NPM1P42-201ENST00000560329 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.52□□□□□ -1.21
NPM1P42-201ENST00000560329 RRP7AQ9Y3A4 280 aaKnown RBP7.52□□□□□ -1.21
NPM1P42-201ENST00000560329 KIF20BQ96Q89 1820 aa7.52□□□□□ -1.21
NPM1P42-201ENST00000560329 SMAPO00193 183 aa7.51□□□□□ -1.21
NPM1P42-201ENST00000560329 TNNT2P45379 298 aaPredicted RBP7.51□□□□□ -1.21
NPM1P42-201ENST00000560329 IDI1Q13907 227 aa7.51□□□□□ -1.21
NPM1P42-201ENST00000560329 POTEEQ6S8J3 1075 aa7.51□□□□□ -1.21
NPM1P42-201ENST00000560329 SPNS2Q8IVW8 549 aa7.51□□□□□ -1.21
NPM1P42-201ENST00000560329 SMC5Q8IY18 1101 aa7.51□□□□□ -1.21
NPM1P42-201ENST00000560329 SMC4Q9NTJ3 1288 aa7.51□□□□□ -1.21
NPM1P42-201ENST00000560329 KIAA1468Q9P260 1216 aa7.51□□□□□ -1.21
NPM1P42-201ENST00000560329 ALKQ9UM73 1620 aa7.51□□□□□ -1.21
NPM1P42-201ENST00000560329 PIK3R4Q99570 1358 aa7.5□□□□□ -1.21
NPM1P42-201ENST00000560329 DIAPH1O60610 1272 aaKnown RBP7.5□□□□□ -1.21
NPM1P42-201ENST00000560329 FRAT2O75474 233 aaPredicted RBP7.5□□□□□ -1.21
NPM1P42-201ENST00000560329 SLC4A3P48751 1232 aa7.5□□□□□ -1.21
NPM1P42-201ENST00000560329 CLK2P49760 499 aaKnown RBP7.5□□□□□ -1.21
NPM1P42-201ENST00000560329 SRPK2P78362 688 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms