RNA–Protein interactions for RNA: ENST00000560321.5

KNSTRN-210, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-210ENST00000560321 FHDC1Q9C0D6 1143 aaPredicted RBP26.52■■□□□ 1.84
KNSTRN-210ENST00000560321 HMOX1P09601 288 aa26.51■■□□□ 1.83
KNSTRN-210ENST00000560321 ATG3Q9NT62 314 aa26.51■■□□□ 1.83
KNSTRN-210ENST00000560321 ZNF831Q5JPB2 1677 aa26.5■■□□□ 1.83
KNSTRN-210ENST00000560321 COL23A1Q86Y22 540 aaPredicted RBP26.5■■□□□ 1.83
KNSTRN-210ENST00000560321 SYT17Q9BSW7 474 aa26.5■■□□□ 1.83
KNSTRN-210ENST00000560321 NUDCQ9Y266 331 aa26.5■■□□□ 1.83
KNSTRN-210ENST00000560321 UBR3Q6ZT12 1888 aa26.5■■□□□ 1.83
KNSTRN-210ENST00000560321 U2SURPO15042 1029 aaKnown RBP26.49■■□□□ 1.83
KNSTRN-210ENST00000560321 RBM42Q9BTD8 480 aaKnown RBP26.49■■□□□ 1.83
KNSTRN-210ENST00000560321 MAP3K5Q99683 1374 aa26.48■■□□□ 1.83
KNSTRN-210ENST00000560321 KDM6AO15550 1401 aaPredicted RBP26.48■■□□□ 1.83
KNSTRN-210ENST00000560321 SSFA2P28290 1259 aa26.47■■□□□ 1.83
KNSTRN-210ENST00000560321 KLHL34Q8N239 644 aa26.45■■□□□ 1.82
KNSTRN-210ENST00000560321 NFATC2IPQ8NCF5 419 aa26.45■■□□□ 1.82
KNSTRN-210ENST00000560321 GNPATO15228 680 aa26.43■■□□□ 1.82
KNSTRN-210ENST00000560321 PHF14O94880 888 aa26.43■■□□□ 1.82
KNSTRN-210ENST00000560321 LINC00116Q8NCU8 138 aa26.43■■□□□ 1.82
KNSTRN-210ENST00000560321 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.42■■□□□ 1.82
KNSTRN-210ENST00000560321 GAS2L2Q8NHY3 880 aa26.42■■□□□ 1.82
KNSTRN-210ENST00000560321 COL3A1P02461 1466 aaPredicted RBP26.42■■□□□ 1.82
KNSTRN-210ENST00000560321 RTCBQ9Y3I0 505 aaKnown RBP26.41■■□□□ 1.82
KNSTRN-210ENST00000560321 ITPK1Q13572 414 aa26.4■■□□□ 1.82
KNSTRN-210ENST00000560321 SLC52A2Q9HAB3 445 aa26.4■■□□□ 1.82
KNSTRN-210ENST00000560321 COL5A3P25940 1745 aaPredicted RBP26.39■■□□□ 1.82
KNSTRN-210ENST00000560321 PPP2R1AP30153 589 aa26.39■■□□□ 1.82
KNSTRN-210ENST00000560321 MTHFSDQ2M296 383 aaKnown RBP26.39■■□□□ 1.82
KNSTRN-210ENST00000560321 RC3H1Q5TC82 1133 aaKnown RBP26.39■■□□□ 1.82
KNSTRN-210ENST00000560321 CHD4Q14839 1912 aa26.38■■□□□ 1.81
KNSTRN-210ENST00000560321 PTCD1O75127 700 aaKnown RBP26.38■■□□□ 1.81
KNSTRN-210ENST00000560321 ADRA2BP18089 450 aa26.38■■□□□ 1.81
KNSTRN-210ENST00000560321 TRAPPC3LQ5T215 181 aa26.38■■□□□ 1.81
KNSTRN-210ENST00000560321 RNMTO43148 476 aaKnown RBP26.37■■□□□ 1.81
KNSTRN-210ENST00000560321 MSL1Q68DK7 614 aa26.37■■□□□ 1.81
KNSTRN-210ENST00000560321 CNTNAP4Q9C0A0 1308 aa26.37■■□□□ 1.81
KNSTRN-210ENST00000560321 GNAT3A8MTJ3 354 aa26.35■■□□□ 1.81
KNSTRN-210ENST00000560321 NEFMP07197 916 aa26.35■■□□□ 1.81
KNSTRN-210ENST00000560321 YY1P25490 414 aa26.35■■□□□ 1.81
KNSTRN-210ENST00000560321 U2AF1L5P0DN76 240 aaPredicted RBP26.34■■□□□ 1.81
KNSTRN-210ENST00000560321 U2AF1Q01081 240 aaKnown RBP eCLIP26.34■■□□□ 1.81
KNSTRN-210ENST00000560321 GPR162Q16538 588 aa26.34■■□□□ 1.81
KNSTRN-210ENST00000560321 MRC1P22897 1456 aa26.34■■□□□ 1.81
KNSTRN-210ENST00000560321 TEFQ10587 303 aa26.33■■□□□ 1.81
KNSTRN-210ENST00000560321 LGR6Q9HBX8 967 aa26.33■■□□□ 1.81
KNSTRN-210ENST00000560321 CICQ96RK0 1608 aaPredicted RBP26.32■■□□□ 1.8
KNSTRN-210ENST00000560321 ADAMTS7Q9UKP4 1686 aa26.32■■□□□ 1.8
KNSTRN-210ENST00000560321 RFC4P35249 363 aa26.32■■□□□ 1.8
KNSTRN-210ENST00000560321 TTC5Q8N0Z6 440 aa26.32■■□□□ 1.8
KNSTRN-210ENST00000560321 CD2APQ9Y5K6 639 aa26.32■■□□□ 1.8
KNSTRN-210ENST00000560321 RPS6KA4O75676 772 aa26.31■■□□□ 1.8
KNSTRN-210ENST00000560321 FCHSD2O94868 740 aa26.31■■□□□ 1.8
KNSTRN-210ENST00000560321 PRKAR2BP31323 418 aa26.31■■□□□ 1.8
KNSTRN-210ENST00000560321 MYH14Q7Z406 1995 aaKnown RBP26.3■■□□□ 1.8
KNSTRN-210ENST00000560321 NLGN1Q8N2Q7 840 aa26.3■■□□□ 1.8
KNSTRN-210ENST00000560321 SLC4A9Q96Q91 983 aa26.3■■□□□ 1.8
KNSTRN-210ENST00000560321 PELP1Q8IZL8 1130 aaKnown RBP26.28■■□□□ 1.8
KNSTRN-210ENST00000560321 RTF1Q92541 710 aaKnown RBP26.28■■□□□ 1.8
KNSTRN-210ENST00000560321 CRKLP46109 303 aaKnown RBP26.27■■□□□ 1.8
KNSTRN-210ENST00000560321 VSIG10Q8N0Z9 540 aa26.27■■□□□ 1.8
KNSTRN-210ENST00000560321 RSPH6AQ9H0K4 717 aa26.27■■□□□ 1.8
KNSTRN-210ENST00000560321 PNNQ9H307 717 aaKnown RBP26.27■■□□□ 1.8
KNSTRN-210ENST00000560321 TJP1Q07157 1748 aa26.27■■□□□ 1.8
KNSTRN-210ENST00000560321 AMIGO3Q86WK7 504 aa26.26■■□□□ 1.79
KNSTRN-210ENST00000560321 ARHGEF1Q92888 912 aaKnown RBP26.25■■□□□ 1.79
KNSTRN-210ENST00000560321 GRIN3BO60391 1043 aa26.24■■□□□ 1.79
KNSTRN-210ENST00000560321 RALBP1Q15311 655 aa26.24■■□□□ 1.79
KNSTRN-210ENST00000560321 SLC39A6Q13433 755 aa26.23■■□□□ 1.79
KNSTRN-210ENST00000560321 SMIM5Q71RC9 77 aa26.23■■□□□ 1.79
KNSTRN-210ENST00000560321 CCDC87Q9NVE4 849 aa26.23■■□□□ 1.79
KNSTRN-210ENST00000560321 UBR2Q8IWV8 1755 aa26.23■■□□□ 1.79
KNSTRN-210ENST00000560321 C4AP0C0L4 1744 aa26.22■■□□□ 1.79
KNSTRN-210ENST00000560321 NLGN2Q8NFZ4 835 aa26.22■■□□□ 1.79
KNSTRN-210ENST00000560321 TEX13AQ9BXU3 409 aaPredicted RBP26.22■■□□□ 1.79
KNSTRN-210ENST00000560321 SIPA1L3O60292 1781 aaPredicted RBP26.22■■□□□ 1.79
KNSTRN-210ENST00000560321 STARD3NLO95772 234 aa26.21■■□□□ 1.79
KNSTRN-210ENST00000560321 MMP10P09238 476 aa26.21■■□□□ 1.79
KNSTRN-210ENST00000560321 DNAJC10Q8IXB1 793 aa26.21■■□□□ 1.79
KNSTRN-210ENST00000560321 ZPR1O75312 459 aa26.2■■□□□ 1.78
KNSTRN-210ENST00000560321 IL17REQ8NFR9 667 aa26.2■■□□□ 1.78
KNSTRN-210ENST00000560321 PHACTR3Q96KR7 559 aa26.2■■□□□ 1.78
KNSTRN-210ENST00000560321 HTATSF1O43719 755 aaKnown RBP26.19■■□□□ 1.78
KNSTRN-210ENST00000560321 ZNF790Q6PG37 636 aa26.19■■□□□ 1.78
KNSTRN-210ENST00000560321 NPM2Q86SE8 214 aaKnown RBP26.19■■□□□ 1.78
KNSTRN-210ENST00000560321 PARP3Q9Y6F1 533 aa26.19■■□□□ 1.78
KNSTRN-210ENST00000560321 KCPQ6ZWJ8 1503 aa26.19■■□□□ 1.78
KNSTRN-210ENST00000560321 ZEB1P37275 1124 aaPredicted RBP26.18■■□□□ 1.78
KNSTRN-210ENST00000560321 DDX10Q13206 875 aaKnown RBP26.17■■□□□ 1.78
KNSTRN-210ENST00000560321 FMNL2Q96PY5 1086 aa26.17■■□□□ 1.78
KNSTRN-210ENST00000560321 CEMIPQ8WUJ3 1361 aa26.17■■□□□ 1.78
KNSTRN-210ENST00000560321 BTBD11A6QL63 1104 aa26.16■■□□□ 1.78
KNSTRN-210ENST00000560321 CYP19A1P11511 503 aaPredicted RBP26.16■■□□□ 1.78
KNSTRN-210ENST00000560321 GYS1P13807 737 aa26.16■■□□□ 1.78
KNSTRN-210ENST00000560321 INTS5Q6P9B9 1019 aaKnown RBP26.16■■□□□ 1.78
KNSTRN-210ENST00000560321 USP42Q9H9J4 1324 aaKnown RBP26.14■■□□□ 1.78
KNSTRN-210ENST00000560321 MAPK8IP3Q9UPT6 1336 aa26.14■■□□□ 1.78
KNSTRN-210ENST00000560321 KIF13BQ9NQT8 1826 aa26.14■■□□□ 1.78
KNSTRN-210ENST00000560321 A0A087WZG4 1122 aa26.13■■□□□ 1.77
KNSTRN-210ENST00000560321 SOS1Q07889 1333 aaPredicted RBP26.13■■□□□ 1.77
KNSTRN-210ENST00000560321 DLG5Q8TDM6 1919 aa26.12■■□□□ 1.77
KNSTRN-210ENST00000560321 HEG1Q9ULI3 1381 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms