RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 ONECUT3O60422 494 aaPredicted RBP9.23□□□□□ -0.93
IRF9-208ENST00000560311 FAM98CQ17RN3 349 aaKnown RBP9.23□□□□□ -0.93
IRF9-208ENST00000560311 C6orf132Q5T0Z8 1188 aa9.23□□□□□ -0.93
IRF9-208ENST00000560311 UNC5CLQ8IV45 518 aa9.23□□□□□ -0.93
IRF9-208ENST00000560311 PCGF6Q9BYE7 350 aa9.23□□□□□ -0.93
IRF9-208ENST00000560311 USP19O94966 1318 aa9.23□□□□□ -0.93
IRF9-208ENST00000560311 BRD4O60885 1362 aaPredicted RBP9.23□□□□□ -0.93
IRF9-208ENST00000560311 MON2Q7Z3U7 1717 aa9.22□□□□□ -0.93
IRF9-208ENST00000560311 AKAP12Q02952 1782 aa9.22□□□□□ -0.93
IRF9-208ENST00000560311 TRIM6-TRIM34B2RNG4 842 aa9.22□□□□□ -0.93
IRF9-208ENST00000560311 CLSPNQ9HAW4 1339 aa9.22□□□□□ -0.93
IRF9-208ENST00000560311 KIAA0232Q92628 1395 aa9.22□□□□□ -0.93
IRF9-208ENST00000560311 SSH2Q76I76 1423 aa9.22□□□□□ -0.93
IRF9-208ENST00000560311 LMO7Q8WWI1 1683 aa9.21□□□□□ -0.93
IRF9-208ENST00000560311 MFSD10Q14728 455 aa9.21□□□□□ -0.94
IRF9-208ENST00000560311 NUTM2GQ5VZR2 741 aa9.21□□□□□ -0.94
IRF9-208ENST00000560311 CABP1Q9NZU7 370 aa9.21□□□□□ -0.94
IRF9-208ENST00000560311 USP47Q96K76 1375 aa9.21□□□□□ -0.94
IRF9-208ENST00000560311 CD163L1Q9NR16 1453 aa9.21□□□□□ -0.94
IRF9-208ENST00000560311 VPS72Q15906 364 aa9.2□□□□□ -0.94
IRF9-208ENST00000560311 ZNF787Q6DD87 383 aa9.2□□□□□ -0.94
IRF9-208ENST00000560311 GJD4Q96KN9 370 aaPredicted RBP9.2□□□□□ -0.94
IRF9-208ENST00000560311 PRDM11Q9NQV5 511 aa9.2□□□□□ -0.94
IRF9-208ENST00000560311 CPSF1Q10570 1443 aaKnown RBP9.2□□□□□ -0.94
IRF9-208ENST00000560311 FAM83GA6ND36 823 aa9.19□□□□□ -0.94
IRF9-208ENST00000560311 BTG4Q9NY30 223 aa9.19□□□□□ -0.94
IRF9-208ENST00000560311 CPDO75976 1380 aa9.19□□□□□ -0.94
IRF9-208ENST00000560311 USP54Q70EL1 1684 aa9.19□□□□□ -0.94
IRF9-208ENST00000560311 THSD7AQ9UPZ6 1657 aa9.19□□□□□ -0.94
IRF9-208ENST00000560311 NFAT5O94916 1531 aa9.18□□□□□ -0.94
IRF9-208ENST00000560311 TJAP1Q5JTD0 557 aa9.18□□□□□ -0.94
IRF9-208ENST00000560311 KTN1Q86UP2 1357 aaKnown RBP9.18□□□□□ -0.94
IRF9-208ENST00000560311 ABTB2Q8N961 1025 aa9.18□□□□□ -0.94
IRF9-208ENST00000560311 CCDC9Q9Y3X0 531 aaKnown RBP9.18□□□□□ -0.94
IRF9-208ENST00000560311 EP400Q96L91 3159 aa9.17□□□□□ -0.94
IRF9-208ENST00000560311 COL5A2P05997 1499 aaPredicted RBP9.17□□□□□ -0.94
IRF9-208ENST00000560311 A0A1W2PP64 1363 aa9.17□□□□□ -0.94
IRF9-208ENST00000560311 NINLQ9Y2I6 1382 aa9.17□□□□□ -0.94
IRF9-208ENST00000560311 CHRNA2Q15822 529 aa9.17□□□□□ -0.94
IRF9-208ENST00000560311 TESK2Q96S53 571 aa9.17□□□□□ -0.94
IRF9-208ENST00000560311 ABCC6O95255 1503 aa9.16□□□□□ -0.94
IRF9-208ENST00000560311 EDC4Q6P2E9 1401 aaKnown RBP9.16□□□□□ -0.94
IRF9-208ENST00000560311 TTC21BQ7Z4L5 1316 aa9.16□□□□□ -0.94
IRF9-208ENST00000560311 TTC21AQ8NDW8 1320 aa9.16□□□□□ -0.94
IRF9-208ENST00000560311 ST20-MTHFSA0A0A6YYL1 179 aa9.16□□□□□ -0.94
IRF9-208ENST00000560311 PPP4CP60510 307 aa9.16□□□□□ -0.94
IRF9-208ENST00000560311 ZC3H6P61129 1189 aaKnown RBP9.16□□□□□ -0.94
IRF9-208ENST00000560311 PPP1R18Q6NYC8 613 aa9.16□□□□□ -0.94
IRF9-208ENST00000560311 EPAS1Q99814 870 aa9.16□□□□□ -0.94
IRF9-208ENST00000560311 CAMTA1Q9Y6Y1 1673 aa9.16□□□□□ -0.94
IRF9-208ENST00000560311 SPATA31A5Q5VU36 1347 aa9.15□□□□□ -0.94
IRF9-208ENST00000560311 SPATA31A7Q8IWB4 1347 aa9.15□□□□□ -0.94
IRF9-208ENST00000560311 NLRP13Q86W25 1043 aa9.15□□□□□ -0.94
IRF9-208ENST00000560311 CCER1Q8TC90 406 aaPredicted RBP9.15□□□□□ -0.94
IRF9-208ENST00000560311 ZNF775Q96BV0 537 aaPredicted RBP9.15□□□□□ -0.94
IRF9-208ENST00000560311 TIMELESSQ9UNS1 1208 aa9.15□□□□□ -0.94
IRF9-208ENST00000560311 OVOS2A0A0J9YW53 1432 aa9.14□□□□□ -0.95
IRF9-208ENST00000560311 OVOS2Q6IE36 1432 aa9.14□□□□□ -0.95
IRF9-208ENST00000560311 MYOM1P52179 1685 aa9.14□□□□□ -0.95
IRF9-208ENST00000560311 GTPBP6O43824 516 aaPredicted RBP9.14□□□□□ -0.95
IRF9-208ENST00000560311 GCP02774 474 aa9.14□□□□□ -0.95
IRF9-208ENST00000560311 MYT1Q01538 1121 aa9.14□□□□□ -0.95
IRF9-208ENST00000560311 SEPT12Q8IYM1 358 aa9.14□□□□□ -0.95
IRF9-208ENST00000560311 TMC1Q8TDI8 760 aa9.14□□□□□ -0.95
IRF9-208ENST00000560311 STRN4Q9NRL3 753 aa9.14□□□□□ -0.95
IRF9-208ENST00000560311 USP31Q70CQ4 1352 aa9.13□□□□□ -0.95
IRF9-208ENST00000560311 SPATA31A1Q5TZJ5 1347 aa9.13□□□□□ -0.95
IRF9-208ENST00000560311 BRWD3Q6RI45 1802 aa9.13□□□□□ -0.95
IRF9-208ENST00000560311 ZBTB7CA1YPR0 619 aa9.13□□□□□ -0.95
IRF9-208ENST00000560311 HDGFL2Q7Z4V5 671 aaPredicted RBP9.13□□□□□ -0.95
IRF9-208ENST00000560311 MTRQ99707 1265 aa9.13□□□□□ -0.95
IRF9-208ENST00000560311 TSKSQ9UJT2 592 aa9.13□□□□□ -0.95
IRF9-208ENST00000560311 V9GY48 417 aaPredicted RBP9.13□□□□□ -0.95
IRF9-208ENST00000560311 AATKQ6ZMQ8 1374 aa9.12□□□□□ -0.95
IRF9-208ENST00000560311 ANKRD36BQ8N2N9 1353 aa9.12□□□□□ -0.95
IRF9-208ENST00000560311 COL18A1P39060 1754 aa9.12□□□□□ -0.95
IRF9-208ENST00000560311 TMF1P82094 1093 aa9.12□□□□□ -0.95
IRF9-208ENST00000560311 NME9Q86XW9 330 aa9.12□□□□□ -0.95
IRF9-208ENST00000560311 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.12□□□□□ -0.95
IRF9-208ENST00000560311 ZNF516Q92618 1163 aa9.12□□□□□ -0.95
IRF9-208ENST00000560311 PUS7Q96PZ0 661 aaKnown RBP9.12□□□□□ -0.95
IRF9-208ENST00000560311 TERF2IPQ9NYB0 399 aa9.12□□□□□ -0.95
IRF9-208ENST00000560311 PDZRN3Q9UPQ7 1066 aa9.12□□□□□ -0.95
IRF9-208ENST00000560311 BLMP54132 1417 aaPredicted RBP9.12□□□□□ -0.95
IRF9-208ENST00000560311 CRB1P82279 1406 aa9.12□□□□□ -0.95
IRF9-208ENST00000560311 LRRC37A3O60309 1634 aa9.12□□□□□ -0.95
IRF9-208ENST00000560311 WNK3Q9BYP7 1800 aa9.12□□□□□ -0.95
IRF9-208ENST00000560311 SLC24A1O60721 1099 aa9.11□□□□□ -0.95
IRF9-208ENST00000560311 SAMD7Q7Z3H4 446 aa9.11□□□□□ -0.95
IRF9-208ENST00000560311 KRT27Q7Z3Y8 459 aa9.11□□□□□ -0.95
IRF9-208ENST00000560311 SLC12A5Q9H2X9 1139 aa9.11□□□□□ -0.95
IRF9-208ENST00000560311 SMAPO00193 183 aa9.1□□□□□ -0.95
IRF9-208ENST00000560311 DPYSL4O14531 572 aa9.1□□□□□ -0.95
IRF9-208ENST00000560311 LARP1Q6PKG0 1096 aaKnown RBP9.1□□□□□ -0.95
IRF9-208ENST00000560311 PACS2Q86VP3 889 aa9.1□□□□□ -0.95
IRF9-208ENST00000560311 KCNH5Q8NCM2 988 aa9.1□□□□□ -0.95
IRF9-208ENST00000560311 DDX12PQ92771 950 aa9.1□□□□□ -0.95
IRF9-208ENST00000560311 IL21Q9HBE4 155 aa9.1□□□□□ -0.95
IRF9-208ENST00000560311 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.1□□□□□ -0.95
IRF9-208ENST00000560311 PARP4Q9UKK3 1724 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms