RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 KDM6AO15550 1401 aaPredicted RBP31.43■■■□□ 2.62
CRNDE-209ENST00000560208 LINC00116Q8NCU8 138 aa31.43■■■□□ 2.62
CRNDE-209ENST00000560208 ATP6V1AP38606 617 aa31.42■■■□□ 2.62
CRNDE-209ENST00000560208 KLHL34Q8N239 644 aa31.42■■■□□ 2.62
CRNDE-209ENST00000560208 YY1P25490 414 aa31.41■■■□□ 2.62
CRNDE-209ENST00000560208 CABP4P57796 275 aa31.41■■■□□ 2.62
CRNDE-209ENST00000560208 ITPK1Q13572 414 aa31.4■■■□□ 2.62
CRNDE-209ENST00000560208 MSL1Q68DK7 614 aa31.4■■■□□ 2.62
CRNDE-209ENST00000560208 AMIGO3Q86WK7 504 aa31.4■■■□□ 2.62
CRNDE-209ENST00000560208 DIAPH1O60610 1272 aaKnown RBP31.39■■■□□ 2.62
CRNDE-209ENST00000560208 HMOX1P09601 288 aa31.38■■■□□ 2.61
CRNDE-209ENST00000560208 SMIM5Q71RC9 77 aa31.37■■■□□ 2.61
CRNDE-209ENST00000560208 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.36■■■□□ 2.61
CRNDE-209ENST00000560208 PHF14O94880 888 aa31.36■■■□□ 2.61
CRNDE-209ENST00000560208 RBM42Q9BTD8 480 aaKnown RBP31.36■■■□□ 2.61
CRNDE-209ENST00000560208 SCN11AQ9UI33 1791 aa31.35■■■□□ 2.61
CRNDE-209ENST00000560208 SSFA2P28290 1259 aa31.34■■■□□ 2.61
CRNDE-209ENST00000560208 ZNF831Q5JPB2 1677 aa31.33■■■□□ 2.61
CRNDE-209ENST00000560208 GNPATO15228 680 aa31.33■■■□□ 2.61
CRNDE-209ENST00000560208 AKAP4Q5JQC9 854 aa31.33■■■□□ 2.61
CRNDE-209ENST00000560208 NFATC2IPQ8NCF5 419 aa31.33■■■□□ 2.61
CRNDE-209ENST00000560208 SLC4A9Q96Q91 983 aa31.33■■■□□ 2.61
CRNDE-209ENST00000560208 UTRNP46939 3433 aa31.32■■■□□ 2.6
CRNDE-209ENST00000560208 VIRMAQ69YN4 1812 aaKnown RBP31.29■■■□□ 2.6
CRNDE-209ENST00000560208 COL3A1P02461 1466 aaPredicted RBP31.29■■■□□ 2.6
CRNDE-209ENST00000560208 NLGN2Q8NFZ4 835 aa31.29■■■□□ 2.6
CRNDE-209ENST00000560208 CHD4Q14839 1912 aa31.28■■■□□ 2.6
CRNDE-209ENST00000560208 PTCD1O75127 700 aaKnown RBP31.27■■■□□ 2.6
CRNDE-209ENST00000560208 GPR162Q16538 588 aa31.27■■■□□ 2.6
CRNDE-209ENST00000560208 COL5A3P25940 1745 aaPredicted RBP31.27■■■□□ 2.6
CRNDE-209ENST00000560208 U2SURPO15042 1029 aaKnown RBP31.26■■■□□ 2.59
CRNDE-209ENST00000560208 MTHFSDQ2M296 383 aaKnown RBP31.26■■■□□ 2.59
CRNDE-209ENST00000560208 LGR6Q9HBX8 967 aa31.26■■■□□ 2.59
CRNDE-209ENST00000560208 RC3H1Q5TC82 1133 aaKnown RBP31.25■■■□□ 2.59
CRNDE-209ENST00000560208 GOLGB1Q14789 3259 aaKnown RBP31.25■■■□□ 2.59
CRNDE-209ENST00000560208 RTCBQ9Y3I0 505 aaKnown RBP31.24■■■□□ 2.59
CRNDE-209ENST00000560208 MYH14Q7Z406 1995 aaKnown RBP31.23■■■□□ 2.59
CRNDE-209ENST00000560208 RNMTO43148 476 aaKnown RBP31.23■■■□□ 2.59
CRNDE-209ENST00000560208 SLC52A2Q9HAB3 445 aa31.23■■■□□ 2.59
CRNDE-209ENST00000560208 CNTNAP4Q9C0A0 1308 aa31.23■■■□□ 2.59
CRNDE-209ENST00000560208 DDX10Q13206 875 aaKnown RBP31.22■■■□□ 2.59
CRNDE-209ENST00000560208 PELP1Q8IZL8 1130 aaKnown RBP31.22■■■□□ 2.59
CRNDE-209ENST00000560208 TRAPPC3LQ5T215 181 aa31.21■■■□□ 2.59
CRNDE-209ENST00000560208 CD2APQ9Y5K6 639 aa31.21■■■□□ 2.59
CRNDE-209ENST00000560208 CFAP53Q96M91 514 aa31.2■■■□□ 2.59
CRNDE-209ENST00000560208 RPS6KA4O75676 772 aa31.18■■■□□ 2.58
CRNDE-209ENST00000560208 ADAMTS7Q9UKP4 1686 aa31.17■■■□□ 2.58
CRNDE-209ENST00000560208 MRC1P22897 1456 aa31.17■■■□□ 2.58
CRNDE-209ENST00000560208 TJP1Q07157 1748 aa31.16■■■□□ 2.58
CRNDE-209ENST00000560208 ADRA2BP18089 450 aa31.16■■■□□ 2.58
CRNDE-209ENST00000560208 ARHGEF1Q92888 912 aaKnown RBP31.16■■■□□ 2.58
CRNDE-209ENST00000560208 PPP2R1AP30153 589 aa31.15■■■□□ 2.58
CRNDE-209ENST00000560208 CRKLP46109 303 aaKnown RBP31.15■■■□□ 2.58
CRNDE-209ENST00000560208 CICQ96RK0 1608 aaPredicted RBP31.14■■■□□ 2.58
CRNDE-209ENST00000560208 ZNF316A6NFI3 1004 aaPredicted RBP31.13■■■□□ 2.57
CRNDE-209ENST00000560208 RFC4P35249 363 aa31.13■■■□□ 2.57
CRNDE-209ENST00000560208 SLC39A6Q13433 755 aa31.13■■■□□ 2.57
CRNDE-209ENST00000560208 GAS2L2Q8NHY3 880 aa31.13■■■□□ 2.57
CRNDE-209ENST00000560208 MMP10P09238 476 aa31.11■■■□□ 2.57
CRNDE-209ENST00000560208 YBX3P16989 372 aaKnown RBP eCLIP31.11■■■□□ 2.57
CRNDE-209ENST00000560208 NLGN1Q8N2Q7 840 aa31.11■■■□□ 2.57
CRNDE-209ENST00000560208 NUDCQ9Y266 331 aa31.11■■■□□ 2.57
CRNDE-209ENST00000560208 C4AP0C0L4 1744 aa31.1■■■□□ 2.57
CRNDE-209ENST00000560208 GNAT3A8MTJ3 354 aa31.09■■■□□ 2.57
CRNDE-209ENST00000560208 DNAJC10Q8IXB1 793 aa31.09■■■□□ 2.57
CRNDE-209ENST00000560208 GRIN3BO60391 1043 aa31.08■■■□□ 2.57
CRNDE-209ENST00000560208 GYS1P13807 737 aa31.08■■■□□ 2.57
CRNDE-209ENST00000560208 RSPH6AQ9H0K4 717 aa31.08■■■□□ 2.57
CRNDE-209ENST00000560208 PRKAR2BP31323 418 aa31.07■■■□□ 2.56
CRNDE-209ENST00000560208 INTS5Q6P9B9 1019 aaKnown RBP31.07■■■□□ 2.56
CRNDE-209ENST00000560208 IL17REQ8NFR9 667 aa31.07■■■□□ 2.56
CRNDE-209ENST00000560208 ZNF784Q8NCA9 323 aaPredicted RBP31.06■■■□□ 2.56
CRNDE-209ENST00000560208 PHACTR3Q96KR7 559 aa31.06■■■□□ 2.56
CRNDE-209ENST00000560208 KCPQ6ZWJ8 1503 aa31.06■■■□□ 2.56
CRNDE-209ENST00000560208 U2AF1L5P0DN76 240 aaPredicted RBP31.05■■■□□ 2.56
CRNDE-209ENST00000560208 U2AF1Q01081 240 aaKnown RBP eCLIP31.05■■■□□ 2.56
CRNDE-209ENST00000560208 CCDC87Q9NVE4 849 aa31.05■■■□□ 2.56
CRNDE-209ENST00000560208 TEFQ10587 303 aa31.04■■■□□ 2.56
CRNDE-209ENST00000560208 UBR2Q8IWV8 1755 aa31.04■■■□□ 2.56
CRNDE-209ENST00000560208 CYP19A1P11511 503 aaPredicted RBP31.03■■■□□ 2.56
CRNDE-209ENST00000560208 VSIG10Q8N0Z9 540 aa31.02■■■□□ 2.56
CRNDE-209ENST00000560208 SRP68Q9UHB9 627 aaKnown RBP31.02■■■□□ 2.56
CRNDE-209ENST00000560208 SIPA1L3O60292 1781 aaPredicted RBP31.02■■■□□ 2.56
CRNDE-209ENST00000560208 TTC5Q8N0Z6 440 aa31.01■■■□□ 2.55
CRNDE-209ENST00000560208 KIF13BQ9NQT8 1826 aa31.01■■■□□ 2.55
CRNDE-209ENST00000560208 FCHSD2O94868 740 aa31■■■□□ 2.55
CRNDE-209ENST00000560208 USP42Q9H9J4 1324 aaKnown RBP30.99■■■□□ 2.55
CRNDE-209ENST00000560208 PARP3Q9Y6F1 533 aa30.99■■■□□ 2.55
CRNDE-209ENST00000560208 SOS1Q07889 1333 aaPredicted RBP30.98■■■□□ 2.55
CRNDE-209ENST00000560208 WWC3Q9ULE0 1092 aa30.97■■■□□ 2.55
CRNDE-209ENST00000560208 CEMIPQ8WUJ3 1361 aa30.96■■■□□ 2.55
CRNDE-209ENST00000560208 FKBP8Q14318 412 aa30.96■■■□□ 2.55
CRNDE-209ENST00000560208 ZNF790Q6PG37 636 aa30.96■■■□□ 2.55
CRNDE-209ENST00000560208 ZBTB1Q9Y2K1 713 aa30.95■■■□□ 2.55
CRNDE-209ENST00000560208 N4BP2Q86UW6 1770 aaPredicted RBP30.94■■■□□ 2.54
CRNDE-209ENST00000560208 ZPR1O75312 459 aa30.94■■■□□ 2.54
CRNDE-209ENST00000560208 C10orf71Q711Q0 1435 aa30.94■■■□□ 2.54
CRNDE-209ENST00000560208 ZNF496Q96IT1 587 aaPredicted RBP30.94■■■□□ 2.54
CRNDE-209ENST00000560208 TGFB2P61812 414 aa30.93■■■□□ 2.54
CRNDE-209ENST00000560208 KIAA1551Q9HCM1 1747 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms