RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 VIRMAQ69YN4 1812 aaKnown RBP18.45■□□□□ 0.54
ZEB1-218ENST00000560196 CYP27B1O15528 508 aa18.45■□□□□ 0.54
ZEB1-218ENST00000560196 EIF4A1P60842 406 aaKnown RBP18.45■□□□□ 0.54
ZEB1-218ENST00000560196 ZCRB1Q8TBF4 217 aaKnown RBP18.45■□□□□ 0.54
ZEB1-218ENST00000560196 CERKQ8TCT0 537 aa18.45■□□□□ 0.54
ZEB1-218ENST00000560196 STRN4Q9NRL3 753 aa18.45■□□□□ 0.54
ZEB1-218ENST00000560196 DDX19BQ9UMR2 479 aa18.45■□□□□ 0.54
ZEB1-218ENST00000560196 PCDH11XQ9BZA7 1347 aa18.45■□□□□ 0.54
ZEB1-218ENST00000560196 PCDH11YQ9BZA8 1340 aa18.45■□□□□ 0.54
ZEB1-218ENST00000560196 BTBD11A6QL63 1104 aa18.44■□□□□ 0.54
ZEB1-218ENST00000560196 ABCC4O15439 1325 aa18.44■□□□□ 0.54
ZEB1-218ENST00000560196 PTPRCP08575 1304 aa18.44■□□□□ 0.54
ZEB1-218ENST00000560196 HEG1Q9ULI3 1381 aa18.43■□□□□ 0.54
ZEB1-218ENST00000560196 NKX1-1Q15270 411 aaPredicted RBP18.43■□□□□ 0.54
ZEB1-218ENST00000560196 CCDC30Q5VVM6 783 aa18.43■□□□□ 0.54
ZEB1-218ENST00000560196 CHMP4BQ9H444 224 aaKnown RBP18.43■□□□□ 0.54
ZEB1-218ENST00000560196 SLC52A2Q9HAB3 445 aa18.43■□□□□ 0.54
ZEB1-218ENST00000560196 KDM2BQ8NHM5 1336 aa18.43■□□□□ 0.54
ZEB1-218ENST00000560196 CENPQQ7L2Z9 268 aaPredicted RBP18.42■□□□□ 0.54
ZEB1-218ENST00000560196 DISP2A7MBM2 1401 aa18.41■□□□□ 0.54
ZEB1-218ENST00000560196 TMEM57Q8N5G2 664 aa18.41■□□□□ 0.54
ZEB1-218ENST00000560196 JCADQ9P266 1359 aa18.41■□□□□ 0.54
ZEB1-218ENST00000560196 PLCH1Q4KWH8 1693 aa18.41■□□□□ 0.54
ZEB1-218ENST00000560196 TCERG1O14776 1098 aaKnown RBP18.4■□□□□ 0.54
ZEB1-218ENST00000560196 STK31Q9BXU1 1019 aa18.4■□□□□ 0.54
ZEB1-218ENST00000560196 RGS12O14924 1447 aa18.4■□□□□ 0.54
ZEB1-218ENST00000560196 CACNA1FO60840 1977 aa18.39■□□□□ 0.53
ZEB1-218ENST00000560196 SLC4A2P04920 1241 aa18.39■□□□□ 0.53
ZEB1-218ENST00000560196 ITPRIPQ8IWB1 547 aa18.39■□□□□ 0.53
ZEB1-218ENST00000560196 NRAPQ86VF7 1730 aa18.39■□□□□ 0.53
ZEB1-218ENST00000560196 NWD2Q9ULI1 1742 aa18.38■□□□□ 0.53
ZEB1-218ENST00000560196 ERVV-2B6SEH9 535 aa18.38■□□□□ 0.53
ZEB1-218ENST00000560196 KCNQ3O43525 872 aa18.38■□□□□ 0.53
ZEB1-218ENST00000560196 SLIT2O94813 1529 aa18.38■□□□□ 0.53
ZEB1-218ENST00000560196 SHANK3Q9BYB0 1731 aa18.37■□□□□ 0.53
ZEB1-218ENST00000560196 INTS3Q68E01 1043 aaKnown RBP18.37■□□□□ 0.53
ZEB1-218ENST00000560196 CDCA7Q9BWT1 371 aaPredicted RBP18.37■□□□□ 0.53
ZEB1-218ENST00000560196 ZBTB40Q9NUA8 1239 aa18.37■□□□□ 0.53
ZEB1-218ENST00000560196 THRAP3Q9Y2W1 955 aaKnown RBP18.37■□□□□ 0.53
ZEB1-218ENST00000560196 HDGFL1Q5TGJ6 251 aa18.36■□□□□ 0.53
ZEB1-218ENST00000560196 ZNF790Q6PG37 636 aa18.36■□□□□ 0.53
ZEB1-218ENST00000560196 GIGYF1O75420 1035 aaPredicted RBP18.35■□□□□ 0.53
ZEB1-218ENST00000560196 ADAMTS2O95450 1211 aa18.35■□□□□ 0.53
ZEB1-218ENST00000560196 NFATC2IPQ8NCF5 419 aa18.35■□□□□ 0.53
ZEB1-218ENST00000560196 SPATA31A6Q5VVP1 1343 aa18.34■□□□□ 0.53
ZEB1-218ENST00000560196 ZBTB7BO15156 539 aaPredicted RBP18.34■□□□□ 0.53
ZEB1-218ENST00000560196 CABP4P57796 275 aa18.34■□□□□ 0.53
ZEB1-218ENST00000560196 PCDHB15Q9Y5E8 787 aa18.34■□□□□ 0.53
ZEB1-218ENST00000560196 WNK3Q9BYP7 1800 aa18.33■□□□□ 0.53
ZEB1-218ENST00000560196 SPATA31A1Q5TZJ5 1347 aa18.33■□□□□ 0.53
ZEB1-218ENST00000560196 FLIIQ13045 1269 aa18.33■□□□□ 0.52
ZEB1-218ENST00000560196 G2E3Q7L622 706 aa18.33■□□□□ 0.52
ZEB1-218ENST00000560196 NUTM2BA6NNL0 878 aaPredicted RBP18.32■□□□□ 0.52
ZEB1-218ENST00000560196 NUTM2EB1AL46 878 aaPredicted RBP18.32■□□□□ 0.52
ZEB1-218ENST00000560196 NUTM2AQ8IVF1 878 aaPredicted RBP18.32■□□□□ 0.52
ZEB1-218ENST00000560196 RWDD1Q9H446 243 aaPredicted RBP18.32■□□□□ 0.52
ZEB1-218ENST00000560196 SPATA31A5Q5VU36 1347 aa18.31■□□□□ 0.52
ZEB1-218ENST00000560196 SPATA31A7Q8IWB4 1347 aa18.31■□□□□ 0.52
ZEB1-218ENST00000560196 IGHDP01880 384 aa18.31■□□□□ 0.52
ZEB1-218ENST00000560196 HDAC1Q13547 482 aaPredicted RBP18.31■□□□□ 0.52
ZEB1-218ENST00000560196 PXDNLA1KZ92 1463 aa18.31■□□□□ 0.52
ZEB1-218ENST00000560196 LRP6O75581 1613 aa18.31■□□□□ 0.52
ZEB1-218ENST00000560196 CCT4P50991 539 aaKnown RBP18.3■□□□□ 0.52
ZEB1-218ENST00000560196 USP35Q9P2H5 1018 aa18.3■□□□□ 0.52
ZEB1-218ENST00000560196 DBF4Q9UBU7 674 aaPredicted RBP18.3■□□□□ 0.52
ZEB1-218ENST00000560196 TNS2Q63HR2 1409 aa18.3■□□□□ 0.52
ZEB1-218ENST00000560196 SLC39A6Q13433 755 aa18.29■□□□□ 0.52
ZEB1-218ENST00000560196 BARGINQ6ZT62 677 aa18.29■□□□□ 0.52
ZEB1-218ENST00000560196 TTC5Q8N0Z6 440 aa18.29■□□□□ 0.52
ZEB1-218ENST00000560196 DDX54Q8TDD1 881 aaKnown RBP18.29■□□□□ 0.52
ZEB1-218ENST00000560196 FMNL2Q96PY5 1086 aa18.29■□□□□ 0.52
ZEB1-218ENST00000560196 PAPPAQ13219 1627 aa18.28■□□□□ 0.52
ZEB1-218ENST00000560196 EXOC5O00471 708 aa18.28■□□□□ 0.52
ZEB1-218ENST00000560196 SNRPA1P09661 255 aaKnown RBP18.28■□□□□ 0.52
ZEB1-218ENST00000560196 EIF2S2P20042 333 aaKnown RBP18.28■□□□□ 0.52
ZEB1-218ENST00000560196 UNC5CLQ8IV45 518 aa18.28■□□□□ 0.52
ZEB1-218ENST00000560196 ZNF496Q96IT1 587 aaPredicted RBP18.28■□□□□ 0.52
ZEB1-218ENST00000560196 FKBP5Q13451 457 aaPredicted RBP18.27■□□□□ 0.52
ZEB1-218ENST00000560196 FNBP4Q8N3X1 1017 aaPredicted RBP18.27■□□□□ 0.52
ZEB1-218ENST00000560196 NECTIN2Q92692 538 aa18.27■□□□□ 0.52
ZEB1-218ENST00000560196 CHPF2Q9P2E5 772 aa18.27■□□□□ 0.52
ZEB1-218ENST00000560196 N4BP2Q86UW6 1770 aaPredicted RBP18.27■□□□□ 0.51
ZEB1-218ENST00000560196 GLI3P10071 1580 aa18.26■□□□□ 0.51
ZEB1-218ENST00000560196 DDX21Q9NR30 783 aaKnown RBP eCLIP18.26■□□□□ 0.51
ZEB1-218ENST00000560196 HYPKQ9NX55 129 aa18.26■□□□□ 0.51
ZEB1-218ENST00000560196 TOGARAM1Q9Y4F4 1720 aa18.26■□□□□ 0.51
ZEB1-218ENST00000560196 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
ZEB1-218ENST00000560196 VPS72Q15906 364 aa18.25■□□□□ 0.51
ZEB1-218ENST00000560196 TSHZ2Q9NRE2 1034 aa18.25■□□□□ 0.51
ZEB1-218ENST00000560196 BCL9LQ86UU0 1499 aa18.25■□□□□ 0.51
ZEB1-218ENST00000560196 PHAXQ9H814 394 aaKnown RBP18.24■□□□□ 0.51
ZEB1-218ENST00000560196 C5P01031 1676 aa18.24■□□□□ 0.51
ZEB1-218ENST00000560196 ERBB4Q15303 1308 aa18.23■□□□□ 0.51
ZEB1-218ENST00000560196 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
ZEB1-218ENST00000560196 F6X3S4 739 aa18.23■□□□□ 0.51
ZEB1-218ENST00000560196 ADRA2BP18089 450 aa18.23■□□□□ 0.51
ZEB1-218ENST00000560196 NGLY1Q96IV0 654 aa18.23■□□□□ 0.51
ZEB1-218ENST00000560196 TMOD3Q9NYL9 352 aa18.23■□□□□ 0.51
ZEB1-218ENST00000560196 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.23■□□□□ 0.51
ZEB1-218ENST00000560196 PRAMEF22A3QJZ6 481 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms