RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 BRCA1P38398 1863 aaKnown RBP25.84■■□□□ 1.73
CDC42BPB-206ENST00000559790 SLC4A9Q96Q91 983 aa25.84■■□□□ 1.73
CDC42BPB-206ENST00000559790 ATG3Q9NT62 314 aa25.84■■□□□ 1.73
CDC42BPB-206ENST00000559790 KLHL34Q8N239 644 aa25.83■■□□□ 1.73
CDC42BPB-206ENST00000559790 TMOD3Q9NYL9 352 aa25.83■■□□□ 1.73
CDC42BPB-206ENST00000559790 YBX3P16989 372 aaKnown RBP eCLIP25.82■■□□□ 1.72
CDC42BPB-206ENST00000559790 N4BP2Q86UW6 1770 aaPredicted RBP25.8■■□□□ 1.72
CDC42BPB-206ENST00000559790 MSH5O43196 834 aa25.8■■□□□ 1.72
CDC42BPB-206ENST00000559790 COL3A1P02461 1466 aaPredicted RBP25.79■■□□□ 1.72
CDC42BPB-206ENST00000559790 MRC1P22897 1456 aa25.79■■□□□ 1.72
CDC42BPB-206ENST00000559790 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.79■■□□□ 1.72
CDC42BPB-206ENST00000559790 AK7Q96M32 723 aa25.79■■□□□ 1.72
CDC42BPB-206ENST00000559790 UBR2Q8IWV8 1755 aa25.79■■□□□ 1.72
CDC42BPB-206ENST00000559790 MORC1Q86VD1 984 aa25.78■■□□□ 1.72
CDC42BPB-206ENST00000559790 FLAD1Q8NFF5 587 aa25.78■■□□□ 1.72
CDC42BPB-206ENST00000559790 IL13P35225 146 aa25.77■■□□□ 1.72
CDC42BPB-206ENST00000559790 PHF14O94880 888 aa25.76■■□□□ 1.71
CDC42BPB-206ENST00000559790 SSFA2P28290 1259 aa25.76■■□□□ 1.71
CDC42BPB-206ENST00000559790 GPR162Q16538 588 aa25.76■■□□□ 1.71
CDC42BPB-206ENST00000559790 SIPA1L3O60292 1781 aaPredicted RBP25.76■■□□□ 1.71
CDC42BPB-206ENST00000559790 PER1O15534 1290 aaPredicted RBP25.75■■□□□ 1.71
CDC42BPB-206ENST00000559790 ZNF530Q6P9A1 599 aaPredicted RBP25.75■■□□□ 1.71
CDC42BPB-206ENST00000559790 ERVV-2B6SEH9 535 aa25.74■■□□□ 1.71
CDC42BPB-206ENST00000559790 DCAF5Q96JK2 942 aa25.74■■□□□ 1.71
CDC42BPB-206ENST00000559790 KNSTRNQ9Y448 316 aa25.73■■□□□ 1.71
CDC42BPB-206ENST00000559790 ATP6V1AP38606 617 aa25.72■■□□□ 1.71
CDC42BPB-206ENST00000559790 CD2APQ9Y5K6 639 aa25.72■■□□□ 1.71
CDC42BPB-206ENST00000559790 GNPATO15228 680 aa25.71■■□□□ 1.71
CDC42BPB-206ENST00000559790 PLEKHO1Q53GL0 409 aaPredicted RBP25.71■■□□□ 1.71
CDC42BPB-206ENST00000559790 SULT6B1Q6IMI4 303 aa25.7■■□□□ 1.7
CDC42BPB-206ENST00000559790 KCPQ6ZWJ8 1503 aa25.69■■□□□ 1.7
CDC42BPB-206ENST00000559790 AMOTQ4VCS5 1084 aa25.69■■□□□ 1.7
CDC42BPB-206ENST00000559790 PELP1Q8IZL8 1130 aaKnown RBP25.69■■□□□ 1.7
CDC42BPB-206ENST00000559790 CNTNAP4Q9C0A0 1308 aa25.68■■□□□ 1.7
CDC42BPB-206ENST00000559790 HMGB2P26583 209 aaKnown RBP25.68■■□□□ 1.7
CDC42BPB-206ENST00000559790 PXDNLA1KZ92 1463 aa25.67■■□□□ 1.7
CDC42BPB-206ENST00000559790 HSP90AB1P08238 724 aaKnown RBP25.67■■□□□ 1.7
CDC42BPB-206ENST00000559790 ARFGEF1Q9Y6D6 1849 aa25.67■■□□□ 1.7
CDC42BPB-206ENST00000559790 ADCY9O60503 1353 aa25.67■■□□□ 1.7
CDC42BPB-206ENST00000559790 C10orf71Q711Q0 1435 aa25.66■■□□□ 1.7
CDC42BPB-206ENST00000559790 AFDNP55196 1824 aaKnown RBP25.65■■□□□ 1.7
CDC42BPB-206ENST00000559790 MTHFSP49914 203 aa25.65■■□□□ 1.7
CDC42BPB-206ENST00000559790 NPC1L1Q9UHC9 1359 aa25.65■■□□□ 1.7
CDC42BPB-206ENST00000559790 RBM42Q9BTD8 480 aaKnown RBP25.63■■□□□ 1.69
CDC42BPB-206ENST00000559790 RC3H1Q5TC82 1133 aaKnown RBP25.62■■□□□ 1.69
CDC42BPB-206ENST00000559790 NRXN2Q9P2S2 1712 aa25.61■■□□□ 1.69
CDC42BPB-206ENST00000559790 CABP4P57796 275 aa25.61■■□□□ 1.69
CDC42BPB-206ENST00000559790 NFATC2IPQ8NCF5 419 aa25.61■■□□□ 1.69
CDC42BPB-206ENST00000559790 MMP10P09238 476 aa25.6■■□□□ 1.69
CDC42BPB-206ENST00000559790 C1orf141Q5JVX7 400 aa25.6■■□□□ 1.69
CDC42BPB-206ENST00000559790 ARHGEF1Q92888 912 aaKnown RBP25.59■■□□□ 1.69
CDC42BPB-206ENST00000559790 DLEC1Q9Y238 1755 aa25.59■■□□□ 1.69
CDC42BPB-206ENST00000559790 ATP10DQ9P241 1426 aa25.58■■□□□ 1.69
CDC42BPB-206ENST00000559790 GRIN3BO60391 1043 aa25.58■■□□□ 1.69
CDC42BPB-206ENST00000559790 RPS6KA4O75676 772 aa25.58■■□□□ 1.69
CDC42BPB-206ENST00000559790 HMOX1P09601 288 aa25.58■■□□□ 1.69
CDC42BPB-206ENST00000559790 GYS1P13807 737 aa25.58■■□□□ 1.69
CDC42BPB-206ENST00000559790 CC2D1BQ5T0F9 858 aaKnown RBP25.58■■□□□ 1.69
CDC42BPB-206ENST00000559790 LGR6Q9HBX8 967 aa25.58■■□□□ 1.69
CDC42BPB-206ENST00000559790 RTCBQ9Y3I0 505 aaKnown RBP25.58■■□□□ 1.69
CDC42BPB-206ENST00000559790 PTCD1O75127 700 aaKnown RBP25.57■■□□□ 1.68
CDC42BPB-206ENST00000559790 ADRA2BP18089 450 aa25.56■■□□□ 1.68
CDC42BPB-206ENST00000559790 CRKLP46109 303 aaKnown RBP25.56■■□□□ 1.68
CDC42BPB-206ENST00000559790 AKAP4Q5JQC9 854 aa25.56■■□□□ 1.68
CDC42BPB-206ENST00000559790 WWC3Q9ULE0 1092 aa25.56■■□□□ 1.68
CDC42BPB-206ENST00000559790 SLC52A2Q9HAB3 445 aa25.55■■□□□ 1.68
CDC42BPB-206ENST00000559790 SCN7AQ01118 1682 aa25.55■■□□□ 1.68
CDC42BPB-206ENST00000559790 MTHFSDQ2M296 383 aaKnown RBP25.54■■□□□ 1.68
CDC42BPB-206ENST00000559790 TRAPPC3LQ5T215 181 aa25.54■■□□□ 1.68
CDC42BPB-206ENST00000559790 RNMTO43148 476 aaKnown RBP25.53■■□□□ 1.68
CDC42BPB-206ENST00000559790 C1QTNF8P60827 252 aa25.53■■□□□ 1.68
CDC42BPB-206ENST00000559790 INTS5Q6P9B9 1019 aaKnown RBP25.53■■□□□ 1.68
CDC42BPB-206ENST00000559790 SBF1O95248 1867 aa25.53■■□□□ 1.68
CDC42BPB-206ENST00000559790 USP42Q9H9J4 1324 aaKnown RBP25.52■■□□□ 1.68
CDC42BPB-206ENST00000559790 SRP68Q9UHB9 627 aaKnown RBP25.51■■□□□ 1.67
CDC42BPB-206ENST00000559790 DIAPH1O60610 1272 aaKnown RBP25.5■■□□□ 1.67
CDC42BPB-206ENST00000559790 CEP350Q5VT06 3117 aa25.5■■□□□ 1.67
CDC42BPB-206ENST00000559790 DNAJC10Q8IXB1 793 aa25.5■■□□□ 1.67
CDC42BPB-206ENST00000559790 ANKRD31Q8N7Z5 1873 aa25.5■■□□□ 1.67
CDC42BPB-206ENST00000559790 DLG5Q8TDM6 1919 aa25.49■■□□□ 1.67
CDC42BPB-206ENST00000559790 DDR1Q08345 913 aa25.49■■□□□ 1.67
CDC42BPB-206ENST00000559790 SLC39A6Q13433 755 aa25.49■■□□□ 1.67
CDC42BPB-206ENST00000559790 NLGN1Q8N2Q7 840 aa25.49■■□□□ 1.67
CDC42BPB-206ENST00000559790 BCORQ6W2J9 1755 aa25.49■■□□□ 1.67
CDC42BPB-206ENST00000559790 SOS1Q07889 1333 aaPredicted RBP25.47■■□□□ 1.67
CDC42BPB-206ENST00000559790 RFC4P35249 363 aa25.46■■□□□ 1.67
CDC42BPB-206ENST00000559790 FKBP8Q14318 412 aa25.46■■□□□ 1.67
CDC42BPB-206ENST00000559790 GIGYF1O75420 1035 aaPredicted RBP25.45■■□□□ 1.66
CDC42BPB-206ENST00000559790 CYP19A1P11511 503 aaPredicted RBP25.45■■□□□ 1.66
CDC42BPB-206ENST00000559790 COL11A2P13942 1736 aaPredicted RBP25.44■■□□□ 1.66
CDC42BPB-206ENST00000559790 KCNA3P22001 575 aa25.44■■□□□ 1.66
CDC42BPB-206ENST00000559790 CCDC87Q9NVE4 849 aa25.44■■□□□ 1.66
CDC42BPB-206ENST00000559790 A0A0G2JLW4 131 aa25.43■■□□□ 1.66
CDC42BPB-206ENST00000559790 COL15A1P39059 1388 aa25.43■■□□□ 1.66
CDC42BPB-206ENST00000559790 DPEP1P16444 411 aa25.42■■□□□ 1.66
CDC42BPB-206ENST00000559790 TGFB2P61812 414 aa25.42■■□□□ 1.66
CDC42BPB-206ENST00000559790 CCDC88AQ3V6T2 1871 aa25.42■■□□□ 1.66
CDC42BPB-206ENST00000559790 CEMIPQ8WUJ3 1361 aa25.42■■□□□ 1.66
CDC42BPB-206ENST00000559790 ZBTB1Q9Y2K1 713 aa25.41■■□□□ 1.66
CDC42BPB-206ENST00000559790 IL17REQ8NFR9 667 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms