RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 GGNBP2Q9H3C7 697 aa8.36□□□□□ -1.07
CTDSPL2-204ENST00000558966 C11orf95C9JLR9 678 aaPredicted RBP8.35□□□□□ -1.07
CTDSPL2-204ENST00000558966 PDIA6Q15084 440 aa8.35□□□□□ -1.07
CTDSPL2-204ENST00000558966 TOM1L2Q6ZVM7 507 aa8.35□□□□□ -1.07
CTDSPL2-204ENST00000558966 THRAP3Q9Y2W1 955 aaKnown RBP8.35□□□□□ -1.07
CTDSPL2-204ENST00000558966 GTF3C3Q9Y5Q9 886 aa8.35□□□□□ -1.07
CTDSPL2-204ENST00000558966 FBLN1P23142 703 aa8.34□□□□□ -1.07
CTDSPL2-204ENST00000558966 NEUROD2Q15784 382 aa8.34□□□□□ -1.07
CTDSPL2-204ENST00000558966 CCDC125Q86Z20 511 aa8.34□□□□□ -1.07
CTDSPL2-204ENST00000558966 GPIHBP1Q8IV16 184 aa8.34□□□□□ -1.07
CTDSPL2-204ENST00000558966 POLR3GLQ9BT43 218 aa8.34□□□□□ -1.07
CTDSPL2-204ENST00000558966 COLQQ9Y215 455 aaPredicted RBP8.34□□□□□ -1.07
CTDSPL2-204ENST00000558966 ERBB3P21860 1342 aa8.34□□□□□ -1.07
CTDSPL2-204ENST00000558966 DISP2A7MBM2 1401 aa8.34□□□□□ -1.07
CTDSPL2-204ENST00000558966 TNS1Q9HBL0 1735 aaKnown RBP8.34□□□□□ -1.07
CTDSPL2-204ENST00000558966 SPDYE16A6NNV3 312 aaPredicted RBP8.34□□□□□ -1.07
CTDSPL2-204ENST00000558966 TMEM92Q6UXU6 159 aa8.34□□□□□ -1.07
CTDSPL2-204ENST00000558966 CARD10Q9BWT7 1032 aa8.34□□□□□ -1.07
CTDSPL2-204ENST00000558966 MAP3K19Q56UN5 1328 aa8.34□□□□□ -1.07
CTDSPL2-204ENST00000558966 RGPD1P0DJD0 1748 aa8.33□□□□□ -1.08
CTDSPL2-204ENST00000558966 PEAK1Q9H792 1746 aa8.33□□□□□ -1.08
CTDSPL2-204ENST00000558966 SEC24BO95487 1268 aa8.33□□□□□ -1.08
CTDSPL2-204ENST00000558966 CSB-PGBD3P0DP91 1061 aa8.33□□□□□ -1.08
CTDSPL2-204ENST00000558966 IP6K1Q92551 441 aa8.33□□□□□ -1.08
CTDSPL2-204ENST00000558966 L3MBTL3Q96JM7 780 aaPredicted RBP8.33□□□□□ -1.08
CTDSPL2-204ENST00000558966 DCBLD2Q96PD2 775 aa8.33□□□□□ -1.08
CTDSPL2-204ENST00000558966 ANKRD24Q8TF21 1146 aa8.32□□□□□ -1.08
CTDSPL2-204ENST00000558966 CCDC7Q96M83 1385 aa8.32□□□□□ -1.08
CTDSPL2-204ENST00000558966 FAM208AQ9UK61 1670 aaKnown RBP8.32□□□□□ -1.08
CTDSPL2-204ENST00000558966 ANKRD26Q9UPS8 1709 aa8.32□□□□□ -1.08
CTDSPL2-204ENST00000558966 RTL1A6NKG5 1358 aa8.32□□□□□ -1.08
CTDSPL2-204ENST00000558966 HOXC9P31274 260 aa8.32□□□□□ -1.08
CTDSPL2-204ENST00000558966 RRS1Q15050 365 aaKnown RBP8.32□□□□□ -1.08
CTDSPL2-204ENST00000558966 DEFB132Q7Z7B7 95 aa8.32□□□□□ -1.08
CTDSPL2-204ENST00000558966 RGPD2P0DJD1 1756 aa8.31□□□□□ -1.08
CTDSPL2-204ENST00000558966 SRCAPQ6ZRS2 3230 aa8.31□□□□□ -1.08
CTDSPL2-204ENST00000558966 KIF7Q2M1P5 1343 aa8.31□□□□□ -1.08
CTDSPL2-204ENST00000558966 MAP3K9P80192 1104 aa8.31□□□□□ -1.08
CTDSPL2-204ENST00000558966 PDE3BQ13370 1112 aa8.31□□□□□ -1.08
CTDSPL2-204ENST00000558966 NLRP2Q9NX02 1062 aa8.31□□□□□ -1.08
CTDSPL2-204ENST00000558966 TNS2Q63HR2 1409 aa8.3□□□□□ -1.08
CTDSPL2-204ENST00000558966 SBF2Q86WG5 1849 aa8.3□□□□□ -1.08
CTDSPL2-204ENST00000558966 CGNL1Q0VF96 1302 aa8.3□□□□□ -1.08
CTDSPL2-204ENST00000558966 FAM196AQ6ZSG2 479 aa8.3□□□□□ -1.08
CTDSPL2-204ENST00000558966 CDCA7Q9BWT1 371 aaPredicted RBP8.3□□□□□ -1.08
CTDSPL2-204ENST00000558966 PANK3Q9H999 370 aa8.3□□□□□ -1.08
CTDSPL2-204ENST00000558966 OVOS2A0A0G2JMS6 1433 aa8.3□□□□□ -1.08
CTDSPL2-204ENST00000558966 AMPHP49418 695 aa8.3□□□□□ -1.08
CTDSPL2-204ENST00000558966 SF3B2Q13435 895 aaKnown RBP8.3□□□□□ -1.08
CTDSPL2-204ENST00000558966 DDB1Q16531 1140 aa8.3□□□□□ -1.08
CTDSPL2-204ENST00000558966 LTV1Q96GA3 475 aaPredicted RBP8.3□□□□□ -1.08
CTDSPL2-204ENST00000558966 MAP2P11137 1827 aaKnown RBP8.29□□□□□ -1.08
CTDSPL2-204ENST00000558966 GRXCR2A6NFK2 248 aa8.29□□□□□ -1.08
CTDSPL2-204ENST00000558966 TRIM37O94972 964 aa8.29□□□□□ -1.08
CTDSPL2-204ENST00000558966 MARCH10Q8NA82 808 aaPredicted RBP8.29□□□□□ -1.08
CTDSPL2-204ENST00000558966 EMILIN1Q9Y6C2 1016 aa8.29□□□□□ -1.08
CTDSPL2-204ENST00000558966 FLT4P35916 1363 aa8.29□□□□□ -1.08
CTDSPL2-204ENST00000558966 KIF24Q5T7B8 1368 aa8.29□□□□□ -1.08
CTDSPL2-204ENST00000558966 POTEFA5A3E0 1075 aa8.28□□□□□ -1.08
CTDSPL2-204ENST00000558966 BAG6P46379 1132 aa8.28□□□□□ -1.08
CTDSPL2-204ENST00000558966 KRI1Q8N9T8 703 aaKnown RBP8.28□□□□□ -1.08
CTDSPL2-204ENST00000558966 BCL9O00512 1426 aa8.28□□□□□ -1.08
CTDSPL2-204ENST00000558966 INSRP06213 1382 aa8.28□□□□□ -1.08
CTDSPL2-204ENST00000558966 IL2RBP14784 551 aa8.28□□□□□ -1.08
CTDSPL2-204ENST00000558966 HSP90AB2PQ58FF8 381 aa8.28□□□□□ -1.08
CTDSPL2-204ENST00000558966 EN1Q05925 392 aaPredicted RBP8.27□□□□□ -1.09
CTDSPL2-204ENST00000558966 SHANK3Q9BYB0 1731 aa8.27□□□□□ -1.09
CTDSPL2-204ENST00000558966 NSD2O96028 1365 aa8.27□□□□□ -1.09
CTDSPL2-204ENST00000558966 MEGF6O75095 1541 aa8.27□□□□□ -1.09
CTDSPL2-204ENST00000558966 RREB1Q92766 1687 aa8.27□□□□□ -1.09
CTDSPL2-204ENST00000558966 SMG6Q86US8 1419 aaKnown RBP8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 EXOC5O00471 708 aa8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 NBPF6Q5VWK0 638 aa8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 SLC39A7Q92504 469 aa8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 NBPF4Q96M43 638 aa8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 WASHC2AQ641Q2 1341 aa8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 APBA3O96018 575 aa8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 EZH2Q15910 746 aaKnown RBP8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 PTF1AQ7RTS3 328 aa8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 USHBP1Q8N6Y0 703 aa8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 OXER1Q8TDS5 423 aa8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 AK7Q96M32 723 aa8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 CAMKK2Q96RR4 588 aa8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 POLKQ9UBT6 870 aa8.26□□□□□ -1.09
CTDSPL2-204ENST00000558966 NUP188Q5SRE5 1749 aa8.25□□□□□ -1.09
CTDSPL2-204ENST00000558966 NHSQ6T4R5 1651 aa8.25□□□□□ -1.09
CTDSPL2-204ENST00000558966 NCAPD2Q15021 1401 aa8.25□□□□□ -1.09
CTDSPL2-204ENST00000558966 RGPD3A6NKT7 1758 aaPredicted RBP8.25□□□□□ -1.09
CTDSPL2-204ENST00000558966 RGPD4Q7Z3J3 1758 aa8.25□□□□□ -1.09
CTDSPL2-204ENST00000558966 TNNT2P45379 298 aaPredicted RBP8.25□□□□□ -1.09
CTDSPL2-204ENST00000558966 PPM1GO15355 546 aaPredicted RBP8.24□□□□□ -1.09
CTDSPL2-204ENST00000558966 PER1O15534 1290 aaPredicted RBP8.24□□□□□ -1.09
CTDSPL2-204ENST00000558966 METRNQ9UJH8 293 aa8.24□□□□□ -1.09
CTDSPL2-204ENST00000558966 KNSTRNQ9Y448 316 aa8.24□□□□□ -1.09
CTDSPL2-204ENST00000558966 PARD3Q8TEW0 1356 aa8.24□□□□□ -1.09
CTDSPL2-204ENST00000558966 KAT6BQ8WYB5 2073 aa8.24□□□□□ -1.09
CTDSPL2-204ENST00000558966 GPR37O15354 613 aa8.23□□□□□ -1.09
CTDSPL2-204ENST00000558966 DDX12PQ92771 950 aa8.23□□□□□ -1.09
CTDSPL2-204ENST00000558966 GPBP1L1Q9HC44 474 aaPredicted RBP8.23□□□□□ -1.09
CTDSPL2-204ENST00000558966 KCNQ2O43526 872 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms