RNA–Protein interactions for RNA: ENST00000558941.5

PCAT29-202, prostate cancer associated transcript 29, humanhuman

TSL 4 BASIC

Gene PCAT29, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-202ENST00000558941 NLRP6P59044 892 aa11.38□□□□□ -0.59
PCAT29-202ENST00000558941 DEFB115Q30KQ5 88 aa11.38□□□□□ -0.59
PCAT29-202ENST00000558941 SPTBN5Q9NRC6 3674 aaKnown RBP11.38□□□□□ -0.59
PCAT29-202ENST00000558941 BRCA2P51587 3418 aa11.37□□□□□ -0.59
PCAT29-202ENST00000558941 DDX54Q8TDD1 881 aaKnown RBP11.37□□□□□ -0.59
PCAT29-202ENST00000558941 MPHOSPH9Q99550 1183 aa11.37□□□□□ -0.59
PCAT29-202ENST00000558941 USP47Q96K76 1375 aa11.37□□□□□ -0.59
PCAT29-202ENST00000558941 VCANP13611 3396 aa11.36□□□□□ -0.59
PCAT29-202ENST00000558941 SLC17A8Q8NDX2 589 aa11.36□□□□□ -0.59
PCAT29-202ENST00000558941 ZNF219Q9P2Y4 722 aaPredicted RBP11.36□□□□□ -0.59
PCAT29-202ENST00000558941 FAM208AQ9UK61 1670 aaKnown RBP11.36□□□□□ -0.59
PCAT29-202ENST00000558941 LTN1O94822 1766 aa11.36□□□□□ -0.59
PCAT29-202ENST00000558941 DLEC1Q9Y238 1755 aa11.35□□□□□ -0.59
PCAT29-202ENST00000558941 RANBP2P49792 3224 aaKnown RBP11.34□□□□□ -0.59
PCAT29-202ENST00000558941 LMNB1P20700 586 aa11.34□□□□□ -0.59
PCAT29-202ENST00000558941 SSFA2P28290 1259 aa11.34□□□□□ -0.59
PCAT29-202ENST00000558941 DALRD3Q5D0E6 543 aaKnown RBP11.34□□□□□ -0.59
PCAT29-202ENST00000558941 AK7Q96M32 723 aa11.34□□□□□ -0.59
PCAT29-202ENST00000558941 CDK19Q9BWU1 502 aa11.34□□□□□ -0.59
PCAT29-202ENST00000558941 PIM2Q9P1W9 311 aa11.34□□□□□ -0.59
PCAT29-202ENST00000558941 CCDC61Q9Y6R9 512 aa11.34□□□□□ -0.59
PCAT29-202ENST00000558941 PALLDQ8WX93 1383 aa11.33□□□□□ -0.6
PCAT29-202ENST00000558941 ITGB4P16144 1822 aa11.32□□□□□ -0.6
PCAT29-202ENST00000558941 SCN4AP35499 1836 aa11.32□□□□□ -0.6
PCAT29-202ENST00000558941 STAC3Q96MF2 364 aa11.32□□□□□ -0.6
PCAT29-202ENST00000558941 NLRP2Q9NX02 1062 aa11.32□□□□□ -0.6
PCAT29-202ENST00000558941 SOX12O15370 315 aa11.31□□□□□ -0.6
PCAT29-202ENST00000558941 CHRNA5P30532 468 aa11.31□□□□□ -0.6
PCAT29-202ENST00000558941 CYP4F22Q6NT55 531 aa11.31□□□□□ -0.6
PCAT29-202ENST00000558941 CAPNS2Q96L46 248 aa11.31□□□□□ -0.6
PCAT29-202ENST00000558941 RGPD2P0DJD1 1756 aa11.31□□□□□ -0.6
PCAT29-202ENST00000558941 HTTP42858 3142 aa11.3□□□□□ -0.6
PCAT29-202ENST00000558941 NFKBIEO00221 500 aa11.3□□□□□ -0.6
PCAT29-202ENST00000558941 AOC2O75106 756 aa11.3□□□□□ -0.6
PCAT29-202ENST00000558941 NBPF15Q8N660 670 aa11.3□□□□□ -0.6
PCAT29-202ENST00000558941 LINC00116Q8NCU8 138 aa11.3□□□□□ -0.6
PCAT29-202ENST00000558941 CENPFP49454 3210 aa11.3□□□□□ -0.6
PCAT29-202ENST00000558941 LDHDQ86WU2 507 aa11.29□□□□□ -0.6
PCAT29-202ENST00000558941 GPR101Q96P66 508 aaPredicted RBP11.29□□□□□ -0.6
PCAT29-202ENST00000558941 BEGAINQ9BUH8 593 aa11.29□□□□□ -0.6
PCAT29-202ENST00000558941 CCDC87Q9NVE4 849 aa11.29□□□□□ -0.6
PCAT29-202ENST00000558941 FER1L6Q2WGJ9 1857 aa11.29□□□□□ -0.6
PCAT29-202ENST00000558941 MPNDQ8N594 471 aa11.28□□□□□ -0.6
PCAT29-202ENST00000558941 DDNO94850 711 aaPredicted RBP11.27□□□□□ -0.61
PCAT29-202ENST00000558941 TRPM7Q96QT4 1865 aa11.26□□□□□ -0.61
PCAT29-202ENST00000558941 FMR1Q06787 632 aaKnown RBP eCLIP11.26□□□□□ -0.61
PCAT29-202ENST00000558941 TAF1DQ9H5J8 278 aaPredicted RBP11.26□□□□□ -0.61
PCAT29-202ENST00000558941 ABT1Q9ULW3 272 aaKnown RBP11.26□□□□□ -0.61
PCAT29-202ENST00000558941 SCN11AQ9UI33 1791 aa11.26□□□□□ -0.61
PCAT29-202ENST00000558941 TRIOBPQ9H2D6 2365 aa11.25□□□□□ -0.61
PCAT29-202ENST00000558941 GRM1Q13255 1194 aa11.25□□□□□ -0.61
PCAT29-202ENST00000558941 KCNH5Q8NCM2 988 aa11.25□□□□□ -0.61
PCAT29-202ENST00000558941 ANKRD24Q8TF21 1146 aa11.25□□□□□ -0.61
PCAT29-202ENST00000558941 LAMA3Q16787 3333 aa11.24□□□□□ -0.61
PCAT29-202ENST00000558941 GYS1P13807 737 aa11.24□□□□□ -0.61
PCAT29-202ENST00000558941 GNPATO15228 680 aa11.23□□□□□ -0.61
PCAT29-202ENST00000558941 CA12O43570 354 aa11.23□□□□□ -0.61
PCAT29-202ENST00000558941 ITPK1Q13572 414 aa11.23□□□□□ -0.61
PCAT29-202ENST00000558941 DPY19L2Q6NUT2 758 aa11.23□□□□□ -0.61
PCAT29-202ENST00000558941 COLQQ9Y215 455 aaPredicted RBP11.23□□□□□ -0.61
PCAT29-202ENST00000558941 COL5A3P25940 1745 aaPredicted RBP11.23□□□□□ -0.61
PCAT29-202ENST00000558941 AFDNP55196 1824 aaKnown RBP11.23□□□□□ -0.61
PCAT29-202ENST00000558941 MNX1P50219 401 aaPredicted RBP11.22□□□□□ -0.61
PCAT29-202ENST00000558941 TMF1P82094 1093 aa11.22□□□□□ -0.61
PCAT29-202ENST00000558941 DDR1Q08345 913 aa11.22□□□□□ -0.61
PCAT29-202ENST00000558941 MAP1SQ66K74 1059 aaPredicted RBP11.22□□□□□ -0.61
PCAT29-202ENST00000558941 NLGN1Q8N2Q7 840 aa11.22□□□□□ -0.61
PCAT29-202ENST00000558941 MAP2K2P36507 400 aa11.21□□□□□ -0.61
PCAT29-202ENST00000558941 ECE1P42892 770 aa11.21□□□□□ -0.61
PCAT29-202ENST00000558941 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
PCAT29-202ENST00000558941 CNTROBQ8N137 903 aa11.2□□□□□ -0.62
PCAT29-202ENST00000558941 L3MBTL3Q96JM7 780 aaPredicted RBP11.2□□□□□ -0.62
PCAT29-202ENST00000558941 DDX21Q9NR30 783 aaKnown RBP eCLIP11.2□□□□□ -0.62
PCAT29-202ENST00000558941 NRXN2Q9P2S2 1712 aa11.2□□□□□ -0.62
PCAT29-202ENST00000558941 MUC3AQ02505 3323 aa11.2□□□□□ -0.62
PCAT29-202ENST00000558941 TTC21BQ7Z4L5 1316 aa11.19□□□□□ -0.62
PCAT29-202ENST00000558941 BRPF1P55201 1214 aaPredicted RBP11.19□□□□□ -0.62
PCAT29-202ENST00000558941 NBPF1Q3BBV0 1214 aa11.19□□□□□ -0.62
PCAT29-202ENST00000558941 CST9Q5W186 159 aa11.19□□□□□ -0.62
PCAT29-202ENST00000558941 ZIC5Q96T25 663 aa11.19□□□□□ -0.62
PCAT29-202ENST00000558941 HPS5Q9UPZ3 1129 aa11.19□□□□□ -0.62
PCAT29-202ENST00000558941 PARP3Q9Y6F1 533 aa11.19□□□□□ -0.62
PCAT29-202ENST00000558941 MYH14Q7Z406 1995 aaKnown RBP11.19□□□□□ -0.62
PCAT29-202ENST00000558941 RAB3GAP2Q9H2M9 1393 aa11.18□□□□□ -0.62
PCAT29-202ENST00000558941 ERFEQ4G0M1 354 aa11.18□□□□□ -0.62
PCAT29-202ENST00000558941 EAPPQ56P03 285 aaPredicted RBP11.18□□□□□ -0.62
PCAT29-202ENST00000558941 ZCRB1Q8TBF4 217 aaKnown RBP11.18□□□□□ -0.62
PCAT29-202ENST00000558941 COL25A1Q9BXS0 654 aaPredicted RBP11.18□□□□□ -0.62
PCAT29-202ENST00000558941 CIAPIN1Q6FI81 312 aa11.17□□□□□ -0.62
PCAT29-202ENST00000558941 MPRIPQ6WCQ1 1025 aa11.17□□□□□ -0.62
PCAT29-202ENST00000558941 ARHGEF1Q92888 912 aaKnown RBP11.17□□□□□ -0.62
PCAT29-202ENST00000558941 CABP1Q9NZU7 370 aa11.17□□□□□ -0.62
PCAT29-202ENST00000558941 TLL2Q9Y6L7 1015 aa11.17□□□□□ -0.62
PCAT29-202ENST00000558941 LAMB4A4D0S4 1761 aa11.16□□□□□ -0.62
PCAT29-202ENST00000558941 COL11A2P13942 1736 aaPredicted RBP11.16□□□□□ -0.62
PCAT29-202ENST00000558941 MON2Q7Z3U7 1717 aa11.16□□□□□ -0.62
PCAT29-202ENST00000558941 LOC102724428A0A0B4J2F2 783 aa11.16□□□□□ -0.62
PCAT29-202ENST00000558941 IQCA1LA6NCM1 817 aa11.16□□□□□ -0.62
PCAT29-202ENST00000558941 SIK1P57059 783 aa11.16□□□□□ -0.62
PCAT29-202ENST00000558941 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms