RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 SPATA31C2B4DYI2 1134 aa6.24□□□□□ -1.41
LRRC28-212ENST00000558911 HOMEZQ8IX15 550 aa6.24□□□□□ -1.41
LRRC28-212ENST00000558911 EDARADDQ8WWZ3 215 aa6.24□□□□□ -1.41
LRRC28-212ENST00000558911 OSBPL3Q9H4L5 887 aa6.24□□□□□ -1.41
LRRC28-212ENST00000558911 RUBCNLQ9H714 662 aa6.24□□□□□ -1.41
LRRC28-212ENST00000558911 PHF24Q9UPV7 400 aa6.24□□□□□ -1.41
LRRC28-212ENST00000558911 COL8A1P27658 744 aa6.23□□□□□ -1.41
LRRC28-212ENST00000558911 TMEM214Q6NUQ4 689 aaKnown RBP6.23□□□□□ -1.41
LRRC28-212ENST00000558911 CNKSR1Q969H4 720 aa6.23□□□□□ -1.41
LRRC28-212ENST00000558911 SUV39H2Q9H5I1 410 aa6.23□□□□□ -1.41
LRRC28-212ENST00000558911 THBS1P07996 1170 aa6.22□□□□□ -1.41
LRRC28-212ENST00000558911 CSB-PGBD3P0DP91 1061 aa6.22□□□□□ -1.41
LRRC28-212ENST00000558911 BMP4P12644 408 aa6.22□□□□□ -1.41
LRRC28-212ENST00000558911 GTF2E1P29083 439 aaPredicted RBP6.22□□□□□ -1.41
LRRC28-212ENST00000558911 CENPCQ03188 943 aa6.22□□□□□ -1.41
LRRC28-212ENST00000558911 ERICH6Q7L0X2 663 aa6.22□□□□□ -1.41
LRRC28-212ENST00000558911 PGBD3Q8N328 593 aa6.22□□□□□ -1.41
LRRC28-212ENST00000558911 Q8N3U1 123 aa6.22□□□□□ -1.41
LRRC28-212ENST00000558911 PCMTD1Q96MG8 357 aaPredicted RBP6.22□□□□□ -1.41
LRRC28-212ENST00000558911 ZSCAN10Q96SZ4 725 aaPredicted RBP6.22□□□□□ -1.41
LRRC28-212ENST00000558911 CFHR5Q9BXR6 569 aa6.22□□□□□ -1.41
LRRC28-212ENST00000558911 IL2RAP01589 272 aa6.21□□□□□ -1.42
LRRC28-212ENST00000558911 ABHD17AQ96GS6 310 aa6.21□□□□□ -1.42
LRRC28-212ENST00000558911 LRRC4BQ9NT99 713 aa6.21□□□□□ -1.42
LRRC28-212ENST00000558911 GDF2Q9UK05 429 aaPredicted RBP6.21□□□□□ -1.42
LRRC28-212ENST00000558911 TMEM259Q4ZIN3 620 aa6.2□□□□□ -1.42
LRRC28-212ENST00000558911 WDR44Q5JSH3 913 aa6.2□□□□□ -1.42
LRRC28-212ENST00000558911 GNASQ5JWF2 1037 aa6.2□□□□□ -1.42
LRRC28-212ENST00000558911 ESYT1Q9BSJ8 1104 aa6.2□□□□□ -1.42
LRRC28-212ENST00000558911 GGA1Q9UJY5 639 aa6.2□□□□□ -1.42
LRRC28-212ENST00000558911 ZNF330Q9Y3S2 320 aaPredicted RBP6.2□□□□□ -1.42
LRRC28-212ENST00000558911 A0A1B0GTH6 734 aa6.19□□□□□ -1.42
LRRC28-212ENST00000558911 TRAK2O60296 914 aa6.19□□□□□ -1.42
LRRC28-212ENST00000558911 MYCP01106 439 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-212ENST00000558911 CTBSQ01459 385 aa6.19□□□□□ -1.42
LRRC28-212ENST00000558911 NR1H3Q13133 447 aa6.19□□□□□ -1.42
LRRC28-212ENST00000558911 EFHC2Q5JST6 749 aa6.19□□□□□ -1.42
LRRC28-212ENST00000558911 CCDC125Q86Z20 511 aa6.19□□□□□ -1.42
LRRC28-212ENST00000558911 GOLGA6L1Q8N7Z2 621 aa6.19□□□□□ -1.42
LRRC28-212ENST00000558911 GJD4Q96KN9 370 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-212ENST00000558911 CDCA7Q9BWT1 371 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-212ENST00000558911 C1QTNF9BB2RNN3 333 aa6.18□□□□□ -1.42
LRRC28-212ENST00000558911 C2CD2LO14523 706 aa6.18□□□□□ -1.42
LRRC28-212ENST00000558911 STAU1O95793 577 aaKnown RBP6.18□□□□□ -1.42
LRRC28-212ENST00000558911 GNRH1P01148 92 aa6.18□□□□□ -1.42
LRRC28-212ENST00000558911 FGFR3P22607 806 aa6.18□□□□□ -1.42
LRRC28-212ENST00000558911 MSX1P28360 303 aa6.18□□□□□ -1.42
LRRC28-212ENST00000558911 C4orf17Q53FE4 359 aa6.18□□□□□ -1.42
LRRC28-212ENST00000558911 TMEM132AQ24JP5 1023 aa6.17□□□□□ -1.42
LRRC28-212ENST00000558911 NEURL1BA8MQ27 555 aa6.16□□□□□ -1.42
LRRC28-212ENST00000558911 BNIP3LO60238 219 aa6.16□□□□□ -1.42
LRRC28-212ENST00000558911 MCCD1P59942 119 aaPredicted RBP6.16□□□□□ -1.42
LRRC28-212ENST00000558911 DOC2BQ14184 412 aa6.16□□□□□ -1.42
LRRC28-212ENST00000558911 LINC00114Q6XXX2 140 aa6.16□□□□□ -1.42
LRRC28-212ENST00000558911 ATXN7L1Q9ULK2 861 aaPredicted RBP6.16□□□□□ -1.42
LRRC28-212ENST00000558911 GNB5O14775 395 aa6.15□□□□□ -1.42
LRRC28-212ENST00000558911 CHRNA4P43681 627 aa6.15□□□□□ -1.42
LRRC28-212ENST00000558911 PLA2G4AP47712 749 aa6.15□□□□□ -1.42
LRRC28-212ENST00000558911 UBAP2LQ14157 1087 aaKnown RBP6.15□□□□□ -1.42
LRRC28-212ENST00000558911 ALYREFQ86V81 257 aaKnown RBP6.15□□□□□ -1.42
LRRC28-212ENST00000558911 CD163Q86VB7 1156 aa6.15□□□□□ -1.42
LRRC28-212ENST00000558911 IL27Q8NEV9 243 aa6.15□□□□□ -1.42
LRRC28-212ENST00000558911 AIDAQ96BJ3 306 aa6.15□□□□□ -1.42
LRRC28-212ENST00000558911 BTBD6Q96KE9 485 aa6.15□□□□□ -1.42
LRRC28-212ENST00000558911 CCDC85AQ96PX6 553 aaPredicted RBP6.15□□□□□ -1.42
LRRC28-212ENST00000558911 SEMA6BQ9H3T3 888 aa6.15□□□□□ -1.42
LRRC28-212ENST00000558911 SLCO4C1Q6ZQN7 724 aa6.14□□□□□ -1.43
LRRC28-212ENST00000558911 C14orf37Q86TY3 774 aa6.14□□□□□ -1.43
LRRC28-212ENST00000558911 ZNF592Q92610 1267 aa6.14□□□□□ -1.43
LRRC28-212ENST00000558911 XAGE2Q96GT9 111 aa6.14□□□□□ -1.43
LRRC28-212ENST00000558911 PIK3R2O00459 728 aa6.13□□□□□ -1.43
LRRC28-212ENST00000558911 HOXB4P17483 251 aaPredicted RBP6.13□□□□□ -1.43
LRRC28-212ENST00000558911 LBRQ14739 615 aaKnown RBP6.13□□□□□ -1.43
LRRC28-212ENST00000558911 TLR1Q15399 786 aa6.13□□□□□ -1.43
LRRC28-212ENST00000558911 TSGA10IPQ3SY00 556 aa6.13□□□□□ -1.43
LRRC28-212ENST00000558911 ESCO1Q5FWF5 840 aa6.13□□□□□ -1.43
LRRC28-212ENST00000558911 RNF135Q8IUD6 432 aa6.13□□□□□ -1.43
LRRC28-212ENST00000558911 RHBDD1Q8TEB9 315 aa6.13□□□□□ -1.43
LRRC28-212ENST00000558911 PSMG3-AS1Q96PY0 264 aa6.13□□□□□ -1.43
LRRC28-212ENST00000558911 FHDC1Q9C0D6 1143 aaPredicted RBP6.13□□□□□ -1.43
LRRC28-212ENST00000558911 CEP126Q9P2H0 1117 aa6.13□□□□□ -1.43
LRRC28-212ENST00000558911 DCDC2BA2VCK2 349 aa6.12□□□□□ -1.43
LRRC28-212ENST00000558911 EPXP11678 715 aa6.12□□□□□ -1.43
LRRC28-212ENST00000558911 OXLD1Q5BKU9 147 aa6.12□□□□□ -1.43
LRRC28-212ENST00000558911 CHSY3Q70JA7 882 aa6.12□□□□□ -1.43
LRRC28-212ENST00000558911 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
LRRC28-212ENST00000558911 ETNK1Q9HBU6 452 aa6.12□□□□□ -1.43
LRRC28-212ENST00000558911 NOP53Q9NZM5 478 aaKnown RBP6.12□□□□□ -1.43
LRRC28-212ENST00000558911 DISP3Q9P2K9 1392 aa6.12□□□□□ -1.43
LRRC28-212ENST00000558911 HRH3Q9Y5N1 445 aa6.12□□□□□ -1.43
LRRC28-212ENST00000558911 NDUFB9Q9Y6M9 179 aa6.12□□□□□ -1.43
LRRC28-212ENST00000558911 CD33P20138 364 aa6.11□□□□□ -1.43
LRRC28-212ENST00000558911 TBC1D9Q6ZT07 1266 aa6.11□□□□□ -1.43
LRRC28-212ENST00000558911 ZCCHC2Q9C0B9 1178 aaKnown RBP6.11□□□□□ -1.43
LRRC28-212ENST00000558911 DOLKQ9UPQ8 538 aa6.11□□□□□ -1.43
LRRC28-212ENST00000558911 KHNYNO15037 678 aaKnown RBP6.1□□□□□ -1.43
LRRC28-212ENST00000558911 ARAFP10398 606 aa6.1□□□□□ -1.43
LRRC28-212ENST00000558911 DGKGP49619 791 aa6.1□□□□□ -1.43
LRRC28-212ENST00000558911 ARSJQ5FYB0 599 aaPredicted RBP6.1□□□□□ -1.43
LRRC28-212ENST00000558911 ZMYM1Q5SVZ6 1142 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms