RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 ERVV-2B6SEH9 535 aa23.1■■□□□ 1.29
LRRC28-210ENST00000558879 SIK1P57059 783 aa23.1■■□□□ 1.29
LRRC28-210ENST00000558879 COL23A1Q86Y22 540 aaPredicted RBP23.1■■□□□ 1.29
LRRC28-210ENST00000558879 ARXQ96QS3 562 aa23.1■■□□□ 1.29
LRRC28-210ENST00000558879 ASAP1Q9ULH1 1129 aa23.1■■□□□ 1.29
LRRC28-210ENST00000558879 SYT17Q9BSW7 474 aa23.09■■□□□ 1.29
LRRC28-210ENST00000558879 ATG3Q9NT62 314 aa23.08■■□□□ 1.29
LRRC28-210ENST00000558879 AMIGO3Q86WK7 504 aa23.06■■□□□ 1.28
LRRC28-210ENST00000558879 LINC00116Q8NCU8 138 aa23.06■■□□□ 1.28
LRRC28-210ENST00000558879 KIF13BQ9NQT8 1826 aa23.05■■□□□ 1.28
LRRC28-210ENST00000558879 ITPK1Q13572 414 aa23.05■■□□□ 1.28
LRRC28-210ENST00000558879 C1orf141Q5JVX7 400 aa23.05■■□□□ 1.28
LRRC28-210ENST00000558879 FLAD1Q8NFF5 587 aa23.05■■□□□ 1.28
LRRC28-210ENST00000558879 DIAPH1O60610 1272 aaKnown RBP23.04■■□□□ 1.28
LRRC28-210ENST00000558879 POLD1P28340 1107 aa23.04■■□□□ 1.28
LRRC28-210ENST00000558879 AK7Q96M32 723 aa23.04■■□□□ 1.28
LRRC28-210ENST00000558879 HMOX1P09601 288 aa23.02■■□□□ 1.28
LRRC28-210ENST00000558879 SLC4A9Q96Q91 983 aa23.02■■□□□ 1.28
LRRC28-210ENST00000558879 SSFA2P28290 1259 aa23.01■■□□□ 1.27
LRRC28-210ENST00000558879 ATP6V1AP38606 617 aa23.01■■□□□ 1.27
LRRC28-210ENST00000558879 AKAP4Q5JQC9 854 aa23.01■■□□□ 1.27
LRRC28-210ENST00000558879 KIAA1551Q9HCM1 1747 aa22.99■■□□□ 1.27
LRRC28-210ENST00000558879 KCPQ6ZWJ8 1503 aa22.99■■□□□ 1.27
LRRC28-210ENST00000558879 MSH5O43196 834 aa22.99■■□□□ 1.27
LRRC28-210ENST00000558879 CABP4P57796 275 aa22.99■■□□□ 1.27
LRRC28-210ENST00000558879 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.98■■□□□ 1.27
LRRC28-210ENST00000558879 DCAF8L1A6NGE4 600 aa22.98■■□□□ 1.27
LRRC28-210ENST00000558879 MSL1Q68DK7 614 aa22.98■■□□□ 1.27
LRRC28-210ENST00000558879 DLG5Q8TDM6 1919 aa22.98■■□□□ 1.27
LRRC28-210ENST00000558879 CNTNAP4Q9C0A0 1308 aa22.97■■□□□ 1.27
LRRC28-210ENST00000558879 UTRNP46939 3433 aa22.96■■□□□ 1.27
LRRC28-210ENST00000558879 PHF14O94880 888 aa22.96■■□□□ 1.27
LRRC28-210ENST00000558879 GNPATO15228 680 aa22.95■■□□□ 1.26
LRRC28-210ENST00000558879 CNGB1Q14028 1251 aaPredicted RBP22.95■■□□□ 1.26
LRRC28-210ENST00000558879 MTHFSDQ2M296 383 aaKnown RBP22.95■■□□□ 1.26
LRRC28-210ENST00000558879 SMIM5Q71RC9 77 aa22.95■■□□□ 1.26
LRRC28-210ENST00000558879 NFATC2IPQ8NCF5 419 aa22.95■■□□□ 1.26
LRRC28-210ENST00000558879 BRCA1P38398 1863 aaKnown RBP22.94■■□□□ 1.26
LRRC28-210ENST00000558879 RBM42Q9BTD8 480 aaKnown RBP22.94■■□□□ 1.26
LRRC28-210ENST00000558879 RNMTO43148 476 aaKnown RBP22.93■■□□□ 1.26
LRRC28-210ENST00000558879 SLC52A2Q9HAB3 445 aa22.93■■□□□ 1.26
LRRC28-210ENST00000558879 RC3H1Q5TC82 1133 aaKnown RBP22.92■■□□□ 1.26
LRRC28-210ENST00000558879 NLGN2Q8NFZ4 835 aa22.92■■□□□ 1.26
LRRC28-210ENST00000558879 LGR6Q9HBX8 967 aa22.92■■□□□ 1.26
LRRC28-210ENST00000558879 YY1P25490 414 aa22.91■■□□□ 1.26
LRRC28-210ENST00000558879 PPP2R1AP30153 589 aa22.91■■□□□ 1.26
LRRC28-210ENST00000558879 KLHL34Q8N239 644 aa22.91■■□□□ 1.26
LRRC28-210ENST00000558879 U2SURPO15042 1029 aaKnown RBP22.9■■□□□ 1.26
LRRC28-210ENST00000558879 N4BP2Q86UW6 1770 aaPredicted RBP22.9■■□□□ 1.26
LRRC28-210ENST00000558879 CFAP53Q96M91 514 aa22.89■■□□□ 1.25
LRRC28-210ENST00000558879 PTCD1O75127 700 aaKnown RBP22.88■■□□□ 1.25
LRRC28-210ENST00000558879 ADRA2BP18089 450 aa22.88■■□□□ 1.25
LRRC28-210ENST00000558879 RTCBQ9Y3I0 505 aaKnown RBP22.88■■□□□ 1.25
LRRC28-210ENST00000558879 GOLGB1Q14789 3259 aaKnown RBP22.88■■□□□ 1.25
LRRC28-210ENST00000558879 GAS2L2Q8NHY3 880 aa22.87■■□□□ 1.25
LRRC28-210ENST00000558879 RSPH6AQ9H0K4 717 aa22.87■■□□□ 1.25
LRRC28-210ENST00000558879 AFDNP55196 1824 aaKnown RBP22.87■■□□□ 1.25
LRRC28-210ENST00000558879 RPS6KA4O75676 772 aa22.86■■□□□ 1.25
LRRC28-210ENST00000558879 CD2APQ9Y5K6 639 aa22.86■■□□□ 1.25
LRRC28-210ENST00000558879 CEMIPQ8WUJ3 1361 aa22.86■■□□□ 1.25
LRRC28-210ENST00000558879 CRKLP46109 303 aaKnown RBP22.85■■□□□ 1.25
LRRC28-210ENST00000558879 SCN7AQ01118 1682 aa22.84■■□□□ 1.25
LRRC28-210ENST00000558879 NRXN2Q9P2S2 1712 aa22.83■■□□□ 1.25
LRRC28-210ENST00000558879 PRKAR2BP31323 418 aa22.83■■□□□ 1.25
LRRC28-210ENST00000558879 SLC39A6Q13433 755 aa22.83■■□□□ 1.25
LRRC28-210ENST00000558879 TRAPPC3LQ5T215 181 aa22.83■■□□□ 1.25
LRRC28-210ENST00000558879 ARHGEF1Q92888 912 aaKnown RBP22.83■■□□□ 1.25
LRRC28-210ENST00000558879 C10orf71Q711Q0 1435 aa22.82■■□□□ 1.24
LRRC28-210ENST00000558879 GNAT3A8MTJ3 354 aa22.82■■□□□ 1.24
LRRC28-210ENST00000558879 ARFGEF1Q9Y6D6 1849 aa22.82■■□□□ 1.24
LRRC28-210ENST00000558879 LAMB4A4D0S4 1761 aa22.81■■□□□ 1.24
LRRC28-210ENST00000558879 BCORQ6W2J9 1755 aa22.81■■□□□ 1.24
LRRC28-210ENST00000558879 KDM3BQ7LBC6 1761 aa22.81■■□□□ 1.24
LRRC28-210ENST00000558879 GPR162Q16538 588 aa22.81■■□□□ 1.24
LRRC28-210ENST00000558879 PHACTR3Q96KR7 559 aa22.81■■□□□ 1.24
LRRC28-210ENST00000558879 NUDCQ9Y266 331 aa22.81■■□□□ 1.24
LRRC28-210ENST00000558879 GYS1P13807 737 aa22.8■■□□□ 1.24
LRRC28-210ENST00000558879 INTS5Q6P9B9 1019 aaKnown RBP22.8■■□□□ 1.24
LRRC28-210ENST00000558879 DNAJC10Q8IXB1 793 aa22.8■■□□□ 1.24
LRRC28-210ENST00000558879 IL17REQ8NFR9 667 aa22.8■■□□□ 1.24
LRRC28-210ENST00000558879 PXDNLA1KZ92 1463 aa22.79■■□□□ 1.24
LRRC28-210ENST00000558879 DLEC1Q9Y238 1755 aa22.79■■□□□ 1.24
LRRC28-210ENST00000558879 MMP10P09238 476 aa22.79■■□□□ 1.24
LRRC28-210ENST00000558879 YBX3P16989 372 aaKnown RBP eCLIP22.79■■□□□ 1.241e-6■■■□□ 17.7
LRRC28-210ENST00000558879 VSIG10Q8N0Z9 540 aa22.79■■□□□ 1.24
LRRC28-210ENST00000558879 USP42Q9H9J4 1324 aaKnown RBP22.79■■□□□ 1.24
LRRC28-210ENST00000558879 NLGN1Q8N2Q7 840 aa22.78■■□□□ 1.24
LRRC28-210ENST00000558879 SOS1Q07889 1333 aaPredicted RBP22.78■■□□□ 1.24
LRRC28-210ENST00000558879 U2AF1L5P0DN76 240 aaPredicted RBP22.77■■□□□ 1.24
LRRC28-210ENST00000558879 CYP19A1P11511 503 aaPredicted RBP22.77■■□□□ 1.24
LRRC28-210ENST00000558879 RFC4P35249 363 aa22.77■■□□□ 1.24
LRRC28-210ENST00000558879 U2AF1Q01081 240 aaKnown RBP eCLIP22.77■■□□□ 1.24
LRRC28-210ENST00000558879 CCDC87Q9NVE4 849 aa22.77■■□□□ 1.24
LRRC28-210ENST00000558879 FCHSD2O94868 740 aa22.76■■□□□ 1.23
LRRC28-210ENST00000558879 TEFQ10587 303 aa22.76■■□□□ 1.23
LRRC28-210ENST00000558879 COL15A1P39059 1388 aa22.76■■□□□ 1.23
LRRC28-210ENST00000558879 PELP1Q8IZL8 1130 aaKnown RBP22.75■■□□□ 1.23
LRRC28-210ENST00000558879 HEG1Q9ULI3 1381 aa22.75■■□□□ 1.23
LRRC28-210ENST00000558879 ZNF790Q6PG37 636 aa22.73■■□□□ 1.23
LRRC28-210ENST00000558879 TTC5Q8N0Z6 440 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms