RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 EYA1Q99502 592 aa22.07■■□□□ 1.12
CDC42BPB-203ENST00000558867 CARD14Q9BXL6 1004 aa22.07■■□□□ 1.12
CDC42BPB-203ENST00000558867 ASAP1Q9ULH1 1129 aa22.07■■□□□ 1.12
CDC42BPB-203ENST00000558867 RTCBQ9Y3I0 505 aaKnown RBP22.07■■□□□ 1.12
CDC42BPB-203ENST00000558867 PHKG2P15735 406 aa22.06■■□□□ 1.12
CDC42BPB-203ENST00000558867 SMIM5Q71RC9 77 aa22.06■■□□□ 1.12
CDC42BPB-203ENST00000558867 PLEKHG2Q9H7P9 1386 aa22.05■■□□□ 1.12
CDC42BPB-203ENST00000558867 HSP90AB1P08238 724 aaKnown RBP22.05■■□□□ 1.12
CDC42BPB-203ENST00000558867 ITPK1Q13572 414 aa22.04■■□□□ 1.12
CDC42BPB-203ENST00000558867 MAP2P11137 1827 aaKnown RBP22.03■■□□□ 1.12
CDC42BPB-203ENST00000558867 ADRA2BP18089 450 aa22.03■■□□□ 1.12
CDC42BPB-203ENST00000558867 ATG3Q9NT62 314 aa22.03■■□□□ 1.12
CDC42BPB-203ENST00000558867 ERVV-2B6SEH9 535 aa22.02■■□□□ 1.12
CDC42BPB-203ENST00000558867 APLP1P51693 650 aa22.02■■□□□ 1.12
CDC42BPB-203ENST00000558867 CCDC87Q9NVE4 849 aa22.02■■□□□ 1.12
CDC42BPB-203ENST00000558867 BCS1LQ9Y276 419 aa22.02■■□□□ 1.12
CDC42BPB-203ENST00000558867 KIF3CO14782 793 aa22.01■■□□□ 1.11
CDC42BPB-203ENST00000558867 RC3H1Q5TC82 1133 aaKnown RBP22.01■■□□□ 1.11
CDC42BPB-203ENST00000558867 RBM42Q9BTD8 480 aaKnown RBP22.01■■□□□ 1.11
CDC42BPB-203ENST00000558867 RFC4P35249 363 aa22■■□□□ 1.11
CDC42BPB-203ENST00000558867 POLKQ9UBT6 870 aa22■■□□□ 1.11
CDC42BPB-203ENST00000558867 PARP3Q9Y6F1 533 aa22■■□□□ 1.11
CDC42BPB-203ENST00000558867 ANKRD26Q9UPS8 1709 aa22■■□□□ 1.11
CDC42BPB-203ENST00000558867 TOMM70O94826 608 aa21.99■■□□□ 1.11
CDC42BPB-203ENST00000558867 ARHGAP27Q6ZUM4 889 aa21.99■■□□□ 1.11
CDC42BPB-203ENST00000558867 DCAF5Q96JK2 942 aa21.99■■□□□ 1.11
CDC42BPB-203ENST00000558867 CICQ96RK0 1608 aaPredicted RBP21.98■■□□□ 1.11
CDC42BPB-203ENST00000558867 PLEKHO1Q53GL0 409 aaPredicted RBP21.98■■□□□ 1.11
CDC42BPB-203ENST00000558867 PXDNLA1KZ92 1463 aa21.97■■□□□ 1.11
CDC42BPB-203ENST00000558867 A0A0G2JLW4 131 aa21.97■■□□□ 1.11
CDC42BPB-203ENST00000558867 FCHSD2O94868 740 aa21.97■■□□□ 1.11
CDC42BPB-203ENST00000558867 EIF4A2Q14240 407 aaKnown RBP21.97■■□□□ 1.11
CDC42BPB-203ENST00000558867 AMOTQ4VCS5 1084 aa21.96■■□□□ 1.11
CDC42BPB-203ENST00000558867 ARHGEF1Q92888 912 aaKnown RBP21.96■■□□□ 1.11
CDC42BPB-203ENST00000558867 RPS6KA4O75676 772 aa21.95■■□□□ 1.1
CDC42BPB-203ENST00000558867 CABP4P57796 275 aa21.95■■□□□ 1.1
CDC42BPB-203ENST00000558867 C16orf71Q8IYS4 520 aaPredicted RBP21.95■■□□□ 1.1
CDC42BPB-203ENST00000558867 CNTNAP4Q9C0A0 1308 aa21.95■■□□□ 1.1
CDC42BPB-203ENST00000558867 KIF13BQ9NQT8 1826 aa21.94■■□□□ 1.1
CDC42BPB-203ENST00000558867 TNNT2P45379 298 aaPredicted RBP21.94■■□□□ 1.1
CDC42BPB-203ENST00000558867 POLR3GLQ9BT43 218 aa21.94■■□□□ 1.1
CDC42BPB-203ENST00000558867 KDRP35968 1356 aa21.94■■□□□ 1.1
CDC42BPB-203ENST00000558867 C10orf71Q711Q0 1435 aa21.94■■□□□ 1.1
CDC42BPB-203ENST00000558867 ZNF831Q5JPB2 1677 aa21.94■■□□□ 1.1
CDC42BPB-203ENST00000558867 GYS1P13807 737 aa21.93■■□□□ 1.1
CDC42BPB-203ENST00000558867 DPEP1P16444 411 aa21.92■■□□□ 1.1
CDC42BPB-203ENST00000558867 C1orf141Q5JVX7 400 aa21.92■■□□□ 1.1
CDC42BPB-203ENST00000558867 ZNF530Q6P9A1 599 aaPredicted RBP21.92■■□□□ 1.1
CDC42BPB-203ENST00000558867 PIM2Q9P1W9 311 aa21.91■■□□□ 1.1
CDC42BPB-203ENST00000558867 N4BP2Q86UW6 1770 aaPredicted RBP21.91■■□□□ 1.1
CDC42BPB-203ENST00000558867 MTHFSP49914 203 aa21.9■■□□□ 1.1
CDC42BPB-203ENST00000558867 SLC4A9Q96Q91 983 aa21.9■■□□□ 1.1
CDC42BPB-203ENST00000558867 C4AP0C0L4 1744 aa21.89■■□□□ 1.1
CDC42BPB-203ENST00000558867 RBM46Q8TBY0 533 aaKnown RBP21.89■■□□□ 1.09
CDC42BPB-203ENST00000558867 KDM2BQ8NHM5 1336 aa21.88■■□□□ 1.09
CDC42BPB-203ENST00000558867 DALRD3Q5D0E6 543 aaKnown RBP21.88■■□□□ 1.09
CDC42BPB-203ENST00000558867 C9orf131Q5VYM1 1079 aa21.88■■□□□ 1.09
CDC42BPB-203ENST00000558867 PTCD1O75127 700 aaKnown RBP21.87■■□□□ 1.09
CDC42BPB-203ENST00000558867 NMRK2Q9NPI5 230 aa21.87■■□□□ 1.09
CDC42BPB-203ENST00000558867 COL5A3P25940 1745 aaPredicted RBP21.86■■□□□ 1.09
CDC42BPB-203ENST00000558867 KIAA1551Q9HCM1 1747 aa21.86■■□□□ 1.09
CDC42BPB-203ENST00000558867 CRKLP46109 303 aaKnown RBP21.85■■□□□ 1.09
CDC42BPB-203ENST00000558867 FSTL1Q12841 308 aa21.84■■□□□ 1.09
CDC42BPB-203ENST00000558867 DNAJC5GQ8N7S2 189 aa21.84■■□□□ 1.09
CDC42BPB-203ENST00000558867 NFATC2IPQ8NCF5 419 aa21.84■■□□□ 1.09
CDC42BPB-203ENST00000558867 KCNA3P22001 575 aa21.83■■□□□ 1.09
CDC42BPB-203ENST00000558867 USP42Q9H9J4 1324 aaKnown RBP21.82■■□□□ 1.08
CDC42BPB-203ENST00000558867 ZPR1O75312 459 aa21.82■■□□□ 1.08
CDC42BPB-203ENST00000558867 MORC1Q86VD1 984 aa21.82■■□□□ 1.08
CDC42BPB-203ENST00000558867 KDM6AO15550 1401 aaPredicted RBP21.81■■□□□ 1.08
CDC42BPB-203ENST00000558867 ARFGEF1Q9Y6D6 1849 aa21.81■■□□□ 1.08
CDC42BPB-203ENST00000558867 RNF181Q9P0P0 153 aa21.81■■□□□ 1.08
CDC42BPB-203ENST00000558867 BRCA1P38398 1863 aaKnown RBP21.8■■□□□ 1.08
CDC42BPB-203ENST00000558867 FKBP8Q14318 412 aa21.8■■□□□ 1.08
CDC42BPB-203ENST00000558867 PANK3Q9H999 370 aa21.8■■□□□ 1.08
CDC42BPB-203ENST00000558867 SRP68Q9UHB9 627 aaKnown RBP21.79■■□□□ 1.08
CDC42BPB-203ENST00000558867 MYH14Q7Z406 1995 aaKnown RBP21.79■■□□□ 1.08
CDC42BPB-203ENST00000558867 EIF4G2P78344 907 aaKnown RBP eCLIP21.78■■□□□ 1.08
CDC42BPB-203ENST00000558867 SULT6B1Q6IMI4 303 aa21.78■■□□□ 1.08
CDC42BPB-203ENST00000558867 ZNF316A6NFI3 1004 aaPredicted RBP21.77■■□□□ 1.08
CDC42BPB-203ENST00000558867 KLRG1Q96E93 195 aa21.77■■□□□ 1.08
CDC42BPB-203ENST00000558867 DDR1Q08345 913 aa21.76■■□□□ 1.07
CDC42BPB-203ENST00000558867 AKAP4Q5JQC9 854 aa21.76■■□□□ 1.07
CDC42BPB-203ENST00000558867 AEBP1Q8IUX7 1158 aa21.76■■□□□ 1.07
CDC42BPB-203ENST00000558867 RRAGCQ9HB90 399 aa21.76■■□□□ 1.07
CDC42BPB-203ENST00000558867 ZC3H4Q9UPT8 1303 aaKnown RBP21.76■■□□□ 1.07
CDC42BPB-203ENST00000558867 WDR90Q96KV7 1748 aa21.75■■□□□ 1.07
CDC42BPB-203ENST00000558867 TM4SF1P30408 202 aa21.75■■□□□ 1.07
CDC42BPB-203ENST00000558867 CHRNA5P30532 468 aa21.75■■□□□ 1.07
CDC42BPB-203ENST00000558867 SMC1BQ8NDV3 1235 aa21.75■■□□□ 1.07
CDC42BPB-203ENST00000558867 POLRMTO00411 1230 aaKnown RBP21.74■■□□□ 1.07
CDC42BPB-203ENST00000558867 USPL1Q5W0Q7 1092 aa21.74■■□□□ 1.07
CDC42BPB-203ENST00000558867 INTS5Q6P9B9 1019 aaKnown RBP21.74■■□□□ 1.07
CDC42BPB-203ENST00000558867 KNSTRNQ9Y448 316 aa21.74■■□□□ 1.07
CDC42BPB-203ENST00000558867 KCPQ6ZWJ8 1503 aa21.74■■□□□ 1.07
CDC42BPB-203ENST00000558867 SLC52A2Q9HAB3 445 aa21.73■■□□□ 1.07
CDC42BPB-203ENST00000558867 JMYQ8N9B5 988 aa21.72■■□□□ 1.07
CDC42BPB-203ENST00000558867 LMNB1P20700 586 aa21.71■■□□□ 1.07
CDC42BPB-203ENST00000558867 DNAJC10Q8IXB1 793 aa21.71■■□□□ 1.07
CDC42BPB-203ENST00000558867 TNRC6CQ9HCJ0 1690 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms