RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ADAMTS7Q9UKP4 1686 aa16.58■□□□□ 0.24
SMAD3-207ENST00000558763 DISP2A7MBM2 1401 aa16.57■□□□□ 0.24
SMAD3-207ENST00000558763 AAMPQ13685 434 aa16.57■□□□□ 0.24
SMAD3-207ENST00000558763 PLEKHO1Q53GL0 409 aaPredicted RBP16.57■□□□□ 0.24
SMAD3-207ENST00000558763 SKAP1Q86WV1 359 aa16.57■□□□□ 0.24
SMAD3-207ENST00000558763 RBM19Q9Y4C8 960 aaKnown RBP16.57■□□□□ 0.24
SMAD3-207ENST00000558763 ATRNO75882 1429 aa16.57■□□□□ 0.24
SMAD3-207ENST00000558763 ZNF530Q6P9A1 599 aaPredicted RBP16.57■□□□□ 0.24
SMAD3-207ENST00000558763 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
SMAD3-207ENST00000558763 GLI3P10071 1580 aa16.56■□□□□ 0.24
SMAD3-207ENST00000558763 IGHDP01880 384 aa16.56■□□□□ 0.24
SMAD3-207ENST00000558763 FAM98CQ17RN3 349 aaKnown RBP16.56■□□□□ 0.24
SMAD3-207ENST00000558763 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
SMAD3-207ENST00000558763 RTF1Q92541 710 aaKnown RBP16.56■□□□□ 0.24
SMAD3-207ENST00000558763 TRPC5Q9UL62 973 aaPredicted RBP16.56■□□□□ 0.24
SMAD3-207ENST00000558763 FTSJ3Q8IY81 847 aaKnown RBP16.55■□□□□ 0.24
SMAD3-207ENST00000558763 MIS18AQ9NYP9 233 aa16.55■□□□□ 0.24
SMAD3-207ENST00000558763 THRAP3Q9Y2W1 955 aaKnown RBP16.55■□□□□ 0.24
SMAD3-207ENST00000558763 PCDHB15Q9Y5E8 787 aa16.55■□□□□ 0.24
SMAD3-207ENST00000558763 SHANK3Q9BYB0 1731 aa16.55■□□□□ 0.24
SMAD3-207ENST00000558763 MS4A1P11836 297 aa16.55■□□□□ 0.24
SMAD3-207ENST00000558763 TMEM57Q8N5G2 664 aa16.55■□□□□ 0.24
SMAD3-207ENST00000558763 ARHGAP45Q92619 1136 aa16.55■□□□□ 0.24
SMAD3-207ENST00000558763 SPG7Q9UQ90 795 aa16.55■□□□□ 0.24
SMAD3-207ENST00000558763 RGS12O14924 1447 aa16.54■□□□□ 0.24
SMAD3-207ENST00000558763 GJD4Q96KN9 370 aaPredicted RBP16.54■□□□□ 0.24
SMAD3-207ENST00000558763 QTRT2Q9H974 415 aaKnown RBP16.54■□□□□ 0.24
SMAD3-207ENST00000558763 SIPA1L3O60292 1781 aaPredicted RBP16.54■□□□□ 0.24
SMAD3-207ENST00000558763 A0A0G2JS52 829 aa16.53■□□□□ 0.24
SMAD3-207ENST00000558763 TCERG1O14776 1098 aaKnown RBP16.53■□□□□ 0.24
SMAD3-207ENST00000558763 IPO8O15397 1037 aaKnown RBP16.53■□□□□ 0.24
SMAD3-207ENST00000558763 MYT1Q01538 1121 aa16.53■□□□□ 0.24
SMAD3-207ENST00000558763 C1orf141Q5JVX7 400 aa16.53■□□□□ 0.24
SMAD3-207ENST00000558763 ZCRB1Q8TBF4 217 aaKnown RBP16.53■□□□□ 0.24
SMAD3-207ENST00000558763 PLEKHG2Q9H7P9 1386 aa16.53■□□□□ 0.24
SMAD3-207ENST00000558763 BARGINQ6ZT62 677 aa16.53■□□□□ 0.24
SMAD3-207ENST00000558763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.53■□□□□ 0.243e-7■□□□□ 8.4
SMAD3-207ENST00000558763 ABCC4O15439 1325 aa16.52■□□□□ 0.24
SMAD3-207ENST00000558763 ZNF772Q68DY9 489 aaPredicted RBP16.52■□□□□ 0.24
SMAD3-207ENST00000558763 TSPYL4Q9UJ04 414 aa16.52■□□□□ 0.24
SMAD3-207ENST00000558763 PCDH11XQ9BZA7 1347 aa16.52■□□□□ 0.23
SMAD3-207ENST00000558763 PCDH11YQ9BZA8 1340 aa16.52■□□□□ 0.23
SMAD3-207ENST00000558763 TNS2Q63HR2 1409 aa16.51■□□□□ 0.23
SMAD3-207ENST00000558763 CYP27B1O15528 508 aa16.51■□□□□ 0.23
SMAD3-207ENST00000558763 AKAP4Q5JQC9 854 aa16.51■□□□□ 0.23
SMAD3-207ENST00000558763 DDX54Q8TDD1 881 aaKnown RBP16.51■□□□□ 0.23
SMAD3-207ENST00000558763 CDCA7Q9BWT1 371 aaPredicted RBP16.51■□□□□ 0.23
SMAD3-207ENST00000558763 DDX19BQ9UMR2 479 aa16.51■□□□□ 0.23
SMAD3-207ENST00000558763 PHKG2P15735 406 aa16.5■□□□□ 0.23
SMAD3-207ENST00000558763 DDB1Q16531 1140 aa16.5■□□□□ 0.23
SMAD3-207ENST00000558763 MPRIPQ6WCQ1 1025 aa16.5■□□□□ 0.23
SMAD3-207ENST00000558763 ITPRIPQ8IWB1 547 aa16.5■□□□□ 0.23
SMAD3-207ENST00000558763 BABAM1Q9NWV8 329 aa16.5■□□□□ 0.23
SMAD3-207ENST00000558763 THSD7AQ9UPZ6 1657 aa16.5■□□□□ 0.23
SMAD3-207ENST00000558763 CACNA1FO60840 1977 aa16.5■□□□□ 0.23
SMAD3-207ENST00000558763 IFNL2Q8IZJ0 200 aa16.49■□□□□ 0.23
SMAD3-207ENST00000558763 ZBTB40Q9NUA8 1239 aa16.49■□□□□ 0.23
SMAD3-207ENST00000558763 EXOC5O00471 708 aa16.49■□□□□ 0.23
SMAD3-207ENST00000558763 LGR6Q9HBX8 967 aa16.49■□□□□ 0.23
SMAD3-207ENST00000558763 TAF7Q15545 349 aaPredicted RBP16.48■□□□□ 0.23
SMAD3-207ENST00000558763 SCN11AQ9UI33 1791 aa16.48■□□□□ 0.23
SMAD3-207ENST00000558763 RGS17Q9UGC6 210 aaPredicted RBP16.47■□□□□ 0.23
SMAD3-207ENST00000558763 KDM6AO15550 1401 aaPredicted RBP16.47■□□□□ 0.23
SMAD3-207ENST00000558763 N4BP2Q86UW6 1770 aaPredicted RBP16.45■□□□□ 0.22
SMAD3-207ENST00000558763 ZBTB7BO15156 539 aaPredicted RBP16.44■□□□□ 0.22
SMAD3-207ENST00000558763 RNMTO43148 476 aaKnown RBP16.44■□□□□ 0.22
SMAD3-207ENST00000558763 RBM6P78332 1123 aaKnown RBP16.44■□□□□ 0.22
SMAD3-207ENST00000558763 API5Q9BZZ5 524 aaKnown RBP16.44■□□□□ 0.22
SMAD3-207ENST00000558763 HSP90AB1P08238 724 aaKnown RBP16.44■□□□□ 0.22
SMAD3-207ENST00000558763 SEPT12Q8IYM1 358 aa16.44■□□□□ 0.22
SMAD3-207ENST00000558763 DCAF5Q96JK2 942 aa16.44■□□□□ 0.22
SMAD3-207ENST00000558763 TOGARAM1Q9Y4F4 1720 aa16.43■□□□□ 0.22
SMAD3-207ENST00000558763 SOS1Q07889 1333 aaPredicted RBP16.43■□□□□ 0.22
SMAD3-207ENST00000558763 HDAC1Q13547 482 aaPredicted RBP16.43■□□□□ 0.22
SMAD3-207ENST00000558763 POTEAQ6S8J7 498 aa16.43■□□□□ 0.22
SMAD3-207ENST00000558763 MARCH10Q8NA82 808 aaPredicted RBP16.43■□□□□ 0.22
SMAD3-207ENST00000558763 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
SMAD3-207ENST00000558763 TEFQ10587 303 aa16.42■□□□□ 0.22
SMAD3-207ENST00000558763 G2E3Q7L622 706 aa16.42■□□□□ 0.22
SMAD3-207ENST00000558763 EP400Q96L91 3159 aa16.42■□□□□ 0.22
SMAD3-207ENST00000558763 PTPRCP08575 1304 aa16.42■□□□□ 0.22
SMAD3-207ENST00000558763 MRC1P22897 1456 aa16.42■□□□□ 0.22
SMAD3-207ENST00000558763 RXRBP28702 533 aa16.42■□□□□ 0.22
SMAD3-207ENST00000558763 EIF4A1P60842 406 aaKnown RBP16.41■□□□□ 0.22
SMAD3-207ENST00000558763 NKX1-1Q15270 411 aaPredicted RBP16.41■□□□□ 0.22
SMAD3-207ENST00000558763 INTS3Q68E01 1043 aaKnown RBP16.41■□□□□ 0.22
SMAD3-207ENST00000558763 DOT1LQ8TEK3 1739 aa16.41■□□□□ 0.22
SMAD3-207ENST00000558763 KCNQ3O43525 872 aa16.4■□□□□ 0.22
SMAD3-207ENST00000558763 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
SMAD3-207ENST00000558763 FAM182BQ5T319 152 aa16.4■□□□□ 0.22
SMAD3-207ENST00000558763 RWDD1Q9H446 243 aaPredicted RBP16.4■□□□□ 0.22
SMAD3-207ENST00000558763 BRWD3Q6RI45 1802 aa16.4■□□□□ 0.22
SMAD3-207ENST00000558763 HEG1Q9ULI3 1381 aa16.4■□□□□ 0.22
SMAD3-207ENST00000558763 PDE4AP27815 886 aa16.4■□□□□ 0.22
SMAD3-207ENST00000558763 BACH2Q9BYV9 841 aa16.4■□□□□ 0.22
SMAD3-207ENST00000558763 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
SMAD3-207ENST00000558763 CABP4P57796 275 aa16.38■□□□□ 0.21
SMAD3-207ENST00000558763 NFATC2IPQ8NCF5 419 aa16.38■□□□□ 0.21
SMAD3-207ENST00000558763 SMC5Q8IY18 1101 aa16.38■□□□□ 0.21
SMAD3-207ENST00000558763 ATP10DQ9P241 1426 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms