RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 UBR3Q6ZT12 1888 aa15.76■□□□□ 0.11
CASC4-205ENST00000558735 AMER1Q5JTC6 1135 aaPredicted RBP15.76■□□□□ 0.11
CASC4-205ENST00000558735 ZNF526Q8TF50 670 aaPredicted RBP15.76■□□□□ 0.11
CASC4-205ENST00000558735 TMOD3Q9NYL9 352 aa15.76■□□□□ 0.11
CASC4-205ENST00000558735 KIF7Q2M1P5 1343 aa15.75■□□□□ 0.11
CASC4-205ENST00000558735 LOC102724428A0A0B4J2F2 783 aa15.75■□□□□ 0.11
CASC4-205ENST00000558735 SIK1P57059 783 aa15.75■□□□□ 0.11
CASC4-205ENST00000558735 SMIM5Q71RC9 77 aa15.75■□□□□ 0.11
CASC4-205ENST00000558735 PKD1L3Q7Z443 1732 aa15.74■□□□□ 0.11
CASC4-205ENST00000558735 PER1O15534 1290 aaPredicted RBP15.74■□□□□ 0.11
CASC4-205ENST00000558735 APLP1P51693 650 aa15.74■□□□□ 0.11
CASC4-205ENST00000558735 PLEKHO1Q53GL0 409 aaPredicted RBP15.74■□□□□ 0.11
CASC4-205ENST00000558735 ATG3Q9NT62 314 aa15.74■□□□□ 0.11
CASC4-205ENST00000558735 AEBP1Q8IUX7 1158 aa15.73■□□□□ 0.11
CASC4-205ENST00000558735 DNAJC5GQ8N7S2 189 aa15.73■□□□□ 0.11
CASC4-205ENST00000558735 LINC00116Q8NCU8 138 aa15.73■□□□□ 0.11
CASC4-205ENST00000558735 ITGB4P16144 1822 aa15.73■□□□□ 0.11
CASC4-205ENST00000558735 ERVV-2B6SEH9 535 aa15.72■□□□□ 0.11
CASC4-205ENST00000558735 IL13P35225 146 aa15.72■□□□□ 0.11
CASC4-205ENST00000558735 ITPK1Q13572 414 aa15.72■□□□□ 0.11
CASC4-205ENST00000558735 TOMM70O94826 608 aa15.71■□□□□ 0.11
CASC4-205ENST00000558735 PHF14O94880 888 aa15.71■□□□□ 0.11
CASC4-205ENST00000558735 ATP6V1AP38606 617 aa15.71■□□□□ 0.11
CASC4-205ENST00000558735 TGFB2P61812 414 aa15.71■□□□□ 0.11
CASC4-205ENST00000558735 AMOTQ4VCS5 1084 aa15.71■□□□□ 0.11
CASC4-205ENST00000558735 SULT6B1Q6IMI4 303 aa15.71■□□□□ 0.11
CASC4-205ENST00000558735 DCAF5Q96JK2 942 aa15.71■□□□□ 0.11
CASC4-205ENST00000558735 PLEKHG2Q9H7P9 1386 aa15.71■□□□□ 0.11
CASC4-205ENST00000558735 PXDNLA1KZ92 1463 aa15.71■□□□□ 0.1
CASC4-205ENST00000558735 HSP90AB1P08238 724 aaKnown RBP15.7■□□□□ 0.1
CASC4-205ENST00000558735 MTHFSP49914 203 aa15.7■□□□□ 0.1
CASC4-205ENST00000558735 ZNF530Q6P9A1 599 aaPredicted RBP15.7■□□□□ 0.1
CASC4-205ENST00000558735 SLC4A9Q96Q91 983 aa15.7■□□□□ 0.1
CASC4-205ENST00000558735 KIF13BQ9NQT8 1826 aa15.7■□□□□ 0.1
CASC4-205ENST00000558735 MMP10P09238 476 aa15.68■□□□□ 0.1
CASC4-205ENST00000558735 KIAA1551Q9HCM1 1747 aa15.68■□□□□ 0.1
CASC4-205ENST00000558735 GNPATO15228 680 aa15.67■□□□□ 0.1
CASC4-205ENST00000558735 CABP4P57796 275 aa15.67■□□□□ 0.1
CASC4-205ENST00000558735 NLGN1Q8N2Q7 840 aa15.67■□□□□ 0.1
CASC4-205ENST00000558735 RBM42Q9BTD8 480 aaKnown RBP15.67■□□□□ 0.1
CASC4-205ENST00000558735 WWC3Q9ULE0 1092 aa15.67■□□□□ 0.1
CASC4-205ENST00000558735 C10orf71Q711Q0 1435 aa15.67■□□□□ 0.1
CASC4-205ENST00000558735 CC2D1BQ5T0F9 858 aaKnown RBP15.66■□□□□ 0.1
CASC4-205ENST00000558735 NFATC2IPQ8NCF5 419 aa15.66■□□□□ 0.1
CASC4-205ENST00000558735 KDRP35968 1356 aa15.65■□□□□ 0.1
CASC4-205ENST00000558735 ZNF831Q5JPB2 1677 aa15.65■□□□□ 0.1
CASC4-205ENST00000558735 ADRA2BP18089 450 aa15.65■□□□□ 0.1
CASC4-205ENST00000558735 C1orf141Q5JVX7 400 aa15.65■□□□□ 0.1
CASC4-205ENST00000558735 RC3H1Q5TC82 1133 aaKnown RBP15.65■□□□□ 0.1
CASC4-205ENST00000558735 KDM6AO15550 1401 aaPredicted RBP15.65■□□□□ 0.1
CASC4-205ENST00000558735 RBM46Q8TBY0 533 aaKnown RBP15.64■□□□□ 0.09
CASC4-205ENST00000558735 A0A0G2JLW4 131 aa15.63■□□□□ 0.09
CASC4-205ENST00000558735 HMOX1P09601 288 aa15.63■□□□□ 0.09
CASC4-205ENST00000558735 TRAPPC3LQ5T215 181 aa15.63■□□□□ 0.09
CASC4-205ENST00000558735 BCS1LQ9Y276 419 aa15.63■□□□□ 0.09
CASC4-205ENST00000558735 RTCBQ9Y3I0 505 aaKnown RBP15.63■□□□□ 0.09
CASC4-205ENST00000558735 PTCD1O75127 700 aaKnown RBP15.62■□□□□ 0.09
CASC4-205ENST00000558735 JMYQ8N9B5 988 aa15.62■□□□□ 0.09
CASC4-205ENST00000558735 ARHGEF1Q92888 912 aaKnown RBP15.62■□□□□ 0.09
CASC4-205ENST00000558735 LGR6Q9HBX8 967 aa15.62■□□□□ 0.09
CASC4-205ENST00000558735 NMRK2Q9NPI5 230 aa15.62■□□□□ 0.09
CASC4-205ENST00000558735 DIAPH1O60610 1272 aaKnown RBP15.61■□□□□ 0.09
CASC4-205ENST00000558735 RPS6KA4O75676 772 aa15.61■□□□□ 0.09
CASC4-205ENST00000558735 GYS1P13807 737 aa15.61■□□□□ 0.09
CASC4-205ENST00000558735 KCNA3P22001 575 aa15.61■□□□□ 0.09
CASC4-205ENST00000558735 FSTL1Q12841 308 aa15.61■□□□□ 0.09
CASC4-205ENST00000558735 CNGB1Q14028 1251 aaPredicted RBP15.61■□□□□ 0.09
CASC4-205ENST00000558735 AKAP4Q5JQC9 854 aa15.61■□□□□ 0.09
CASC4-205ENST00000558735 ARHGAP27Q6ZUM4 889 aa15.61■□□□□ 0.09
CASC4-205ENST00000558735 CCDC87Q9NVE4 849 aa15.61■□□□□ 0.09
CASC4-205ENST00000558735 CNTNAP4Q9C0A0 1308 aa15.61■□□□□ 0.09
CASC4-205ENST00000558735 PCNTO95613 3336 aa15.6■□□□□ 0.09
CASC4-205ENST00000558735 DPEP1P16444 411 aa15.6■□□□□ 0.09
CASC4-205ENST00000558735 C4AP0C0L4 1744 aa15.6■□□□□ 0.09
CASC4-205ENST00000558735 N4BP2Q86UW6 1770 aaPredicted RBP15.59■□□□□ 0.09
CASC4-205ENST00000558735 MTHFSDQ2M296 383 aaKnown RBP15.59■□□□□ 0.09
CASC4-205ENST00000558735 KLRG1Q96E93 195 aa15.59■□□□□ 0.09
CASC4-205ENST00000558735 NPC1L1Q9UHC9 1359 aa15.59■□□□□ 0.09
CASC4-205ENST00000558735 BRCA1P38398 1863 aaKnown RBP15.59■□□□□ 0.09
CASC4-205ENST00000558735 WDR90Q96KV7 1748 aa15.58■□□□□ 0.08
CASC4-205ENST00000558735 RNMTO43148 476 aaKnown RBP15.58■□□□□ 0.08
CASC4-205ENST00000558735 FCHSD2O94868 740 aa15.58■□□□□ 0.08
CASC4-205ENST00000558735 C9orf131Q5VYM1 1079 aa15.58■□□□□ 0.08
CASC4-205ENST00000558735 RFC4P35249 363 aa15.57■□□□□ 0.08
CASC4-205ENST00000558735 CRKLP46109 303 aaKnown RBP15.57■□□□□ 0.08
CASC4-205ENST00000558735 SLC52A2Q9HAB3 445 aa15.57■□□□□ 0.08
CASC4-205ENST00000558735 PARP3Q9Y6F1 533 aa15.57■□□□□ 0.08
CASC4-205ENST00000558735 COL5A3P25940 1745 aaPredicted RBP15.57■□□□□ 0.08
CASC4-205ENST00000558735 PIM2Q9P1W9 311 aa15.56■□□□□ 0.08
CASC4-205ENST00000558735 ARFGEF1Q9Y6D6 1849 aa15.56■□□□□ 0.08
CASC4-205ENST00000558735 KDM2BQ8NHM5 1336 aa15.55■□□□□ 0.08
CASC4-205ENST00000558735 SLC39A6Q13433 755 aa15.55■□□□□ 0.08
CASC4-205ENST00000558735 INTS5Q6P9B9 1019 aaKnown RBP15.55■□□□□ 0.08
CASC4-205ENST00000558735 COL13A1Q5TAT6 717 aaPredicted RBP15.54■□□□□ 0.08
CASC4-205ENST00000558735 C16orf71Q8IYS4 520 aaPredicted RBP15.54■□□□□ 0.08
CASC4-205ENST00000558735 MYH14Q7Z406 1995 aaKnown RBP15.53■□□□□ 0.08
CASC4-205ENST00000558735 ZC3H4Q9UPT8 1303 aaKnown RBP15.53■□□□□ 0.08
CASC4-205ENST00000558735 U2SURPO15042 1029 aaKnown RBP15.53■□□□□ 0.08
CASC4-205ENST00000558735 DALRD3Q5D0E6 543 aaKnown RBP15.53■□□□□ 0.08
CASC4-205ENST00000558735 DNAJC10Q8IXB1 793 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms