RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 SPG7Q9UQ90 795 aa13.52□□□□□ -0.24
CSPG4P5-201ENST00000558731 RTL1A6NKG5 1358 aa13.52□□□□□ -0.24
CSPG4P5-201ENST00000558731 SYTL4Q96C24 671 aaPredicted RBP13.52□□□□□ -0.25
CSPG4P5-201ENST00000558731 SPATA31A3Q5VYP0 1347 aa13.52□□□□□ -0.25
CSPG4P5-201ENST00000558731 ARHGAP45Q92619 1136 aa13.52□□□□□ -0.25
CSPG4P5-201ENST00000558731 CRB1P82279 1406 aa13.51□□□□□ -0.25
CSPG4P5-201ENST00000558731 SMARCA5O60264 1052 aaPredicted RBP13.51□□□□□ -0.25
CSPG4P5-201ENST00000558731 AAMPQ13685 434 aa13.51□□□□□ -0.25
CSPG4P5-201ENST00000558731 IL27Q8NEV9 243 aa13.51□□□□□ -0.25
CSPG4P5-201ENST00000558731 HTATSF1O43719 755 aaKnown RBP13.51□□□□□ -0.25
CSPG4P5-201ENST00000558731 C8orf34Q49A92 452 aa13.51□□□□□ -0.25
CSPG4P5-201ENST00000558731 USP19O94966 1318 aa13.5□□□□□ -0.25
CSPG4P5-201ENST00000558731 PTCD1O75127 700 aaKnown RBP13.5□□□□□ -0.25
CSPG4P5-201ENST00000558731 SEC24BO95487 1268 aa13.5□□□□□ -0.25
CSPG4P5-201ENST00000558731 CABP4P57796 275 aa13.5□□□□□ -0.25
CSPG4P5-201ENST00000558731 KIF24Q5T7B8 1368 aa13.5□□□□□ -0.25
CSPG4P5-201ENST00000558731 CHD1LQ86WJ1 897 aa13.49□□□□□ -0.25
CSPG4P5-201ENST00000558731 SPRYD3Q8NCJ5 442 aa13.49□□□□□ -0.25
CSPG4P5-201ENST00000558731 EXOC6BQ9Y2D4 811 aa13.49□□□□□ -0.25
CSPG4P5-201ENST00000558731 DLG5Q8TDM6 1919 aa13.49□□□□□ -0.25
CSPG4P5-201ENST00000558731 PI4KAP2A4QPH2 592 aa13.49□□□□□ -0.25
CSPG4P5-201ENST00000558731 PI4KAP1Q8N8J0 262 aa13.49□□□□□ -0.25
CSPG4P5-201ENST00000558731 ABCC4O15439 1325 aa13.49□□□□□ -0.25
CSPG4P5-201ENST00000558731 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
CSPG4P5-201ENST00000558731 OS9Q13438 667 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P5-201ENST00000558731 IFNL2Q8IZJ0 200 aa13.48□□□□□ -0.25
CSPG4P5-201ENST00000558731 HDAC1Q13547 482 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P5-201ENST00000558731 PTPRCP08575 1304 aa13.48□□□□□ -0.25
CSPG4P5-201ENST00000558731 LARP1Q6PKG0 1096 aaKnown RBP13.48□□□□□ -0.25
CSPG4P5-201ENST00000558731 UBTFL1P0CB47 393 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P5-201ENST00000558731 BTG4Q9NY30 223 aa13.47□□□□□ -0.25
CSPG4P5-201ENST00000558731 TNS3Q68CZ2 1445 aa13.47□□□□□ -0.25
CSPG4P5-201ENST00000558731 CCT4P50991 539 aaKnown RBP13.47□□□□□ -0.25
CSPG4P5-201ENST00000558731 C16orf71Q8IYS4 520 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P5-201ENST00000558731 C9orf78Q9NZ63 289 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P5-201ENST00000558731 LRRFIP2Q9Y608 721 aaKnown RBP13.47□□□□□ -0.25
CSPG4P5-201ENST00000558731 LMTK3Q96Q04 1460 aa13.47□□□□□ -0.25
CSPG4P5-201ENST00000558731 SIRT2Q8IXJ6 389 aa13.46□□□□□ -0.25
CSPG4P5-201ENST00000558731 HMMRO75330 724 aa13.46□□□□□ -0.25
CSPG4P5-201ENST00000558731 PROSER3Q2NL68 480 aa13.46□□□□□ -0.25
CSPG4P5-201ENST00000558731 JARID2Q92833 1246 aaPredicted RBP13.46□□□□□ -0.25
CSPG4P5-201ENST00000558731 GNAI2P04899 355 aa13.46□□□□□ -0.26
CSPG4P5-201ENST00000558731 TSHZ3Q63HK5 1081 aa13.46□□□□□ -0.26
CSPG4P5-201ENST00000558731 RIC3Q7Z5B4 369 aa13.46□□□□□ -0.26
CSPG4P5-201ENST00000558731 SRCIN1Q9C0H9 1055 aa13.45□□□□□ -0.26
CSPG4P5-201ENST00000558731 INTS3Q68E01 1043 aaKnown RBP13.45□□□□□ -0.26
CSPG4P5-201ENST00000558731 PHKG2P15735 406 aa13.44□□□□□ -0.26
CSPG4P5-201ENST00000558731 SMC5Q8IY18 1101 aa13.44□□□□□ -0.26
CSPG4P5-201ENST00000558731 PXDNQ92626 1479 aa13.44□□□□□ -0.26
CSPG4P5-201ENST00000558731 CYP27B1O15528 508 aa13.44□□□□□ -0.26
CSPG4P5-201ENST00000558731 ZCRB1Q8TBF4 217 aaKnown RBP13.44□□□□□ -0.26
CSPG4P5-201ENST00000558731 GCC1Q96CN9 775 aa13.44□□□□□ -0.26
CSPG4P5-201ENST00000558731 LTN1O94822 1766 aa13.44□□□□□ -0.26
CSPG4P5-201ENST00000558731 BRPF1P55201 1214 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P5-201ENST00000558731 CEP85Q6P2H3 762 aa13.43□□□□□ -0.26
CSPG4P5-201ENST00000558731 OTUD7AQ8TE49 926 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P5-201ENST00000558731 ZNF496Q96IT1 587 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P5-201ENST00000558731 IL1RAPL2Q9NP60 686 aa13.43□□□□□ -0.26
CSPG4P5-201ENST00000558731 MAP3K2Q9Y2U5 619 aa13.43□□□□□ -0.26
CSPG4P5-201ENST00000558731 NFAT5O94916 1531 aa13.43□□□□□ -0.26
CSPG4P5-201ENST00000558731 NUCB1Q02818 461 aa13.43□□□□□ -0.26
CSPG4P5-201ENST00000558731 CWF19L2Q2TBE0 894 aaKnown RBP13.43□□□□□ -0.26
CSPG4P5-201ENST00000558731 ZNF790Q6PG37 636 aa13.43□□□□□ -0.26
CSPG4P5-201ENST00000558731 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
CSPG4P5-201ENST00000558731 DBF4Q9UBU7 674 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P5-201ENST00000558731 DNAAF4Q8WXU2 420 aa13.43□□□□□ -0.26
CSPG4P5-201ENST00000558731 GNAI3P08754 354 aa13.42□□□□□ -0.26
CSPG4P5-201ENST00000558731 RBM42Q9BTD8 480 aaKnown RBP13.42□□□□□ -0.26
CSPG4P5-201ENST00000558731 SURF6O75683 361 aaKnown RBP13.42□□□□□ -0.26
CSPG4P5-201ENST00000558731 SLKQ9H2G2 1235 aaPredicted RBP13.42□□□□□ -0.26
CSPG4P5-201ENST00000558731 SLC52A2Q9HAB3 445 aa13.42□□□□□ -0.26
CSPG4P5-201ENST00000558731 GIGYF1O75420 1035 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P5-201ENST00000558731 CHMP3Q9Y3E7 222 aa13.41□□□□□ -0.26
CSPG4P5-201ENST00000558731 IL2RBP14784 551 aa13.41□□□□□ -0.26
CSPG4P5-201ENST00000558731 SRGAP3O43295 1099 aa13.41□□□□□ -0.26
CSPG4P5-201ENST00000558731 RPAP2Q8IXW5 612 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P5-201ENST00000558731 ANKRD44Q8N8A2 993 aa13.41□□□□□ -0.26
CSPG4P5-201ENST00000558731 USP16Q9Y5T5 823 aa13.41□□□□□ -0.26
CSPG4P5-201ENST00000558731 TRIM6-TRIM34B2RNG4 842 aa13.4□□□□□ -0.26
CSPG4P5-201ENST00000558731 NBPF7P0C2Y1 421 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P5-201ENST00000558731 PNMA6EA0A0J9YXQ4 647 aa13.4□□□□□ -0.26
CSPG4P5-201ENST00000558731 DCAF5Q96JK2 942 aa13.4□□□□□ -0.26
CSPG4P5-201ENST00000558731 ATP5J2-PTCD1G3V325 749 aa13.39□□□□□ -0.27
CSPG4P5-201ENST00000558731 DDX58O95786 925 aaKnown RBP13.39□□□□□ -0.27
CSPG4P5-201ENST00000558731 COPS6Q7L5N1 327 aa13.39□□□□□ -0.27
CSPG4P5-201ENST00000558731 XAGE3Q8WTP9 111 aa13.39□□□□□ -0.27
CSPG4P5-201ENST00000558731 RILPL2Q969X0 211 aa13.39□□□□□ -0.27
CSPG4P5-201ENST00000558731 NWD1Q149M9 1564 aa13.39□□□□□ -0.27
CSPG4P5-201ENST00000558731 WDR17Q8IZU2 1322 aa13.39□□□□□ -0.27
CSPG4P5-201ENST00000558731 STRCP1A6NGW2 1772 aa13.39□□□□□ -0.27
CSPG4P5-201ENST00000558731 NEXNQ0ZGT2 675 aa13.39□□□□□ -0.27
CSPG4P5-201ENST00000558731 DCCP43146 1447 aa13.39□□□□□ -0.27
CSPG4P5-201ENST00000558731 MYD88Q99836 296 aa13.38□□□□□ -0.27
CSPG4P5-201ENST00000558731 CHMP4AQ9BY43 222 aa13.38□□□□□ -0.27
CSPG4P5-201ENST00000558731 SIL1Q9H173 461 aa13.38□□□□□ -0.27
CSPG4P5-201ENST00000558731 SOS2Q07890 1332 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P5-201ENST00000558731 MEGF6O75095 1541 aa13.38□□□□□ -0.27
CSPG4P5-201ENST00000558731 RGPD2P0DJD1 1756 aa13.38□□□□□ -0.27
CSPG4P5-201ENST00000558731 UBAP1LF5GYI3 381 aa13.38□□□□□ -0.27
CSPG4P5-201ENST00000558731 FMNL2Q96PY5 1086 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms