RNA–Protein interactions for RNA: ENST00000558677.5

TM2D3-205, Transcript of TM2 domain containing 3, humanhuman

TSL 5

Gene TM2D3, Length 878 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-205ENST00000558677 AKAP4Q5JQC9 854 aa31.63■■■□□ 2.65
TM2D3-205ENST00000558677 CFAP53Q96M91 514 aa31.62■■■□□ 2.65
TM2D3-205ENST00000558677 U2SURPO15042 1029 aaKnown RBP31.61■■■□□ 2.65
TM2D3-205ENST00000558677 COL3A1P02461 1466 aaPredicted RBP31.6■■■□□ 2.65
TM2D3-205ENST00000558677 SYT17Q9BSW7 474 aa31.6■■■□□ 2.65
TM2D3-205ENST00000558677 LINC00116Q8NCU8 138 aa31.59■■■□□ 2.65
TM2D3-205ENST00000558677 RBM42Q9BTD8 480 aaKnown RBP31.59■■■□□ 2.65
TM2D3-205ENST00000558677 NFATC2IPQ8NCF5 419 aa31.58■■■□□ 2.65
TM2D3-205ENST00000558677 ITPK1Q13572 414 aa31.57■■■□□ 2.64
TM2D3-205ENST00000558677 COL24A1Q17RW2 1714 aa31.56■■■□□ 2.64
TM2D3-205ENST00000558677 PHF14O94880 888 aa31.56■■■□□ 2.64
TM2D3-205ENST00000558677 SSFA2P28290 1259 aa31.54■■■□□ 2.64
TM2D3-205ENST00000558677 MTHFSDQ2M296 383 aaKnown RBP31.54■■■□□ 2.64
TM2D3-205ENST00000558677 KLHL34Q8N239 644 aa31.54■■■□□ 2.64
TM2D3-205ENST00000558677 MAP3K5Q99683 1374 aa31.54■■■□□ 2.64
TM2D3-205ENST00000558677 SCN11AQ9UI33 1791 aa31.53■■■□□ 2.64
TM2D3-205ENST00000558677 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.53■■■□□ 2.64
TM2D3-205ENST00000558677 PPP2R1AP30153 589 aa31.53■■■□□ 2.64
TM2D3-205ENST00000558677 MSL1Q68DK7 614 aa31.53■■■□□ 2.64
TM2D3-205ENST00000558677 GNPATO15228 680 aa31.52■■■□□ 2.64
TM2D3-205ENST00000558677 NUDCQ9Y266 331 aa31.52■■■□□ 2.64
TM2D3-205ENST00000558677 ZNF831Q5JPB2 1677 aa31.51■■■□□ 2.64
TM2D3-205ENST00000558677 UBR3Q6ZT12 1888 aa31.51■■■□□ 2.63
TM2D3-205ENST00000558677 PTCD1O75127 700 aaKnown RBP31.5■■■□□ 2.63
TM2D3-205ENST00000558677 SLC52A2Q9HAB3 445 aa31.5■■■□□ 2.63
TM2D3-205ENST00000558677 LGR6Q9HBX8 967 aa31.5■■■□□ 2.63
TM2D3-205ENST00000558677 RNMTO43148 476 aaKnown RBP31.49■■■□□ 2.63
TM2D3-205ENST00000558677 AMIGO3Q86WK7 504 aa31.49■■■□□ 2.63
TM2D3-205ENST00000558677 SLC4A9Q96Q91 983 aa31.49■■■□□ 2.63
TM2D3-205ENST00000558677 SMIM5Q71RC9 77 aa31.47■■■□□ 2.63
TM2D3-205ENST00000558677 GAS2L2Q8NHY3 880 aa31.46■■■□□ 2.63
TM2D3-205ENST00000558677 RTCBQ9Y3I0 505 aaKnown RBP31.46■■■□□ 2.63
TM2D3-205ENST00000558677 RC3H1Q5TC82 1133 aaKnown RBP31.44■■■□□ 2.62
TM2D3-205ENST00000558677 MRC1P22897 1456 aa31.44■■■□□ 2.62
TM2D3-205ENST00000558677 CNTNAP4Q9C0A0 1308 aa31.43■■■□□ 2.62
TM2D3-205ENST00000558677 COL5A3P25940 1745 aaPredicted RBP31.42■■■□□ 2.62
TM2D3-205ENST00000558677 U2AF1L5P0DN76 240 aaPredicted RBP31.42■■■□□ 2.62
TM2D3-205ENST00000558677 U2AF1Q01081 240 aaKnown RBP eCLIP31.42■■■□□ 2.62
TM2D3-205ENST00000558677 TRAPPC3LQ5T215 181 aa31.42■■■□□ 2.62
TM2D3-205ENST00000558677 GNAT3A8MTJ3 354 aa31.41■■■□□ 2.62
TM2D3-205ENST00000558677 PRKAR2BP31323 418 aa31.41■■■□□ 2.62
TM2D3-205ENST00000558677 RSPH6AQ9H0K4 717 aa31.4■■■□□ 2.62
TM2D3-205ENST00000558677 ADAMTS7Q9UKP4 1686 aa31.4■■■□□ 2.62
TM2D3-205ENST00000558677 VIRMAQ69YN4 1812 aaKnown RBP31.4■■■□□ 2.62
TM2D3-205ENST00000558677 ADRA2BP18089 450 aa31.39■■■□□ 2.62
TM2D3-205ENST00000558677 YY1P25490 414 aa31.39■■■□□ 2.62
TM2D3-205ENST00000558677 RPS6KA4O75676 772 aa31.37■■■□□ 2.61
TM2D3-205ENST00000558677 SLC39A6Q13433 755 aa31.37■■■□□ 2.61
TM2D3-205ENST00000558677 TEFQ10587 303 aa31.36■■■□□ 2.61
TM2D3-205ENST00000558677 GPR162Q16538 588 aa31.36■■■□□ 2.61
TM2D3-205ENST00000558677 NLGN2Q8NFZ4 835 aa31.36■■■□□ 2.61
TM2D3-205ENST00000558677 FCHSD2O94868 740 aa31.35■■■□□ 2.61
TM2D3-205ENST00000558677 CRKLP46109 303 aaKnown RBP31.35■■■□□ 2.61
TM2D3-205ENST00000558677 PHACTR3Q96KR7 559 aa31.35■■■□□ 2.61
TM2D3-205ENST00000558677 RFC4P35249 363 aa31.34■■■□□ 2.61
TM2D3-205ENST00000558677 ARHGEF1Q92888 912 aaKnown RBP31.34■■■□□ 2.61
TM2D3-205ENST00000558677 CICQ96RK0 1608 aaPredicted RBP31.34■■■□□ 2.61
TM2D3-205ENST00000558677 TJP1Q07157 1748 aa31.33■■■□□ 2.61
TM2D3-205ENST00000558677 PELP1Q8IZL8 1130 aaKnown RBP31.33■■■□□ 2.61
TM2D3-205ENST00000558677 TTC5Q8N0Z6 440 aa31.33■■■□□ 2.61
TM2D3-205ENST00000558677 CD2APQ9Y5K6 639 aa31.33■■■□□ 2.61
TM2D3-205ENST00000558677 IL17REQ8NFR9 667 aa31.32■■■□□ 2.6
TM2D3-205ENST00000558677 DNAJC10Q8IXB1 793 aa31.31■■■□□ 2.6
TM2D3-205ENST00000558677 NLGN1Q8N2Q7 840 aa31.3■■■□□ 2.6
TM2D3-205ENST00000558677 KCPQ6ZWJ8 1503 aa31.29■■■□□ 2.6
TM2D3-205ENST00000558677 DDX10Q13206 875 aaKnown RBP31.29■■■□□ 2.6
TM2D3-205ENST00000558677 MYH14Q7Z406 1995 aaKnown RBP31.28■■■□□ 2.6
TM2D3-205ENST00000558677 VSIG10Q8N0Z9 540 aa31.28■■■□□ 2.6
TM2D3-205ENST00000558677 NEFMP07197 916 aa31.27■■■□□ 2.6
TM2D3-205ENST00000558677 MMP10P09238 476 aa31.27■■■□□ 2.6
TM2D3-205ENST00000558677 RTF1Q92541 710 aaKnown RBP31.27■■■□□ 2.6
TM2D3-205ENST00000558677 CCDC87Q9NVE4 849 aa31.27■■■□□ 2.6
TM2D3-205ENST00000558677 RALBP1Q15311 655 aa31.26■■■□□ 2.59
TM2D3-205ENST00000558677 INTS5Q6P9B9 1019 aaKnown RBP31.26■■■□□ 2.59
TM2D3-205ENST00000558677 GYS1P13807 737 aa31.25■■■□□ 2.59
TM2D3-205ENST00000558677 CEMIPQ8WUJ3 1361 aa31.25■■■□□ 2.59
TM2D3-205ENST00000558677 CYP19A1P11511 503 aaPredicted RBP31.24■■■□□ 2.59
TM2D3-205ENST00000558677 ZNF790Q6PG37 636 aa31.24■■■□□ 2.59
TM2D3-205ENST00000558677 UBR2Q8IWV8 1755 aa31.23■■■□□ 2.59
TM2D3-205ENST00000558677 C4AP0C0L4 1744 aa31.23■■■□□ 2.59
TM2D3-205ENST00000558677 SIPA1L3O60292 1781 aaPredicted RBP31.21■■■□□ 2.59
TM2D3-205ENST00000558677 USP42Q9H9J4 1324 aaKnown RBP31.21■■■□□ 2.59
TM2D3-205ENST00000558677 BTBD11A6QL63 1104 aa31.2■■■□□ 2.59
TM2D3-205ENST00000558677 UTRNP46939 3433 aa31.19■■■□□ 2.58
TM2D3-205ENST00000558677 STARD3NLO95772 234 aa31.19■■■□□ 2.58
TM2D3-205ENST00000558677 ZNF496Q96IT1 587 aaPredicted RBP31.19■■■□□ 2.58
TM2D3-205ENST00000558677 SRP68Q9UHB9 627 aaKnown RBP31.19■■■□□ 2.58
TM2D3-205ENST00000558677 HTATSF1O43719 755 aaKnown RBP31.18■■■□□ 2.58
TM2D3-205ENST00000558677 GRIN3BO60391 1043 aa31.18■■■□□ 2.58
TM2D3-205ENST00000558677 ZPR1O75312 459 aa31.18■■■□□ 2.58
TM2D3-205ENST00000558677 MCM10Q7L590 875 aa31.18■■■□□ 2.58
TM2D3-205ENST00000558677 TEX13AQ9BXU3 409 aaPredicted RBP31.18■■■□□ 2.58
TM2D3-205ENST00000558677 PNNQ9H307 717 aaKnown RBP31.18■■■□□ 2.58
TM2D3-205ENST00000558677 PARP3Q9Y6F1 533 aa31.18■■■□□ 2.58
TM2D3-205ENST00000558677 SOS1Q07889 1333 aaPredicted RBP31.18■■■□□ 2.58
TM2D3-205ENST00000558677 HEG1Q9ULI3 1381 aa31.17■■■□□ 2.58
TM2D3-205ENST00000558677 FMNL2Q96PY5 1086 aa31.17■■■□□ 2.58
TM2D3-205ENST00000558677 ZBTB1Q9Y2K1 713 aa31.17■■■□□ 2.58
TM2D3-205ENST00000558677 CHD4Q14839 1912 aa31.17■■■□□ 2.58
TM2D3-205ENST00000558677 YBX3P16989 372 aaKnown RBP eCLIP31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms