RNA–Protein interactions for RNA: ENST00000558555.5

MEIS3-204, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 1,715 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-204ENST00000558555 DDB1Q16531 1140 aa30.94■■■□□ 2.54
MEIS3-204ENST00000558555 BABAM1Q9NWV8 329 aa30.93■■■□□ 2.54
MEIS3-204ENST00000558555 KDM6AO15550 1401 aaPredicted RBP30.93■■■□□ 2.54
MEIS3-204ENST00000558555 TSPYL4Q9UJ04 414 aa30.93■■■□□ 2.54
MEIS3-204ENST00000558555 NKX1-1Q15270 411 aaPredicted RBP30.91■■■□□ 2.54
MEIS3-204ENST00000558555 RCAN3Q9UKA8 241 aa30.91■■■□□ 2.54
MEIS3-204ENST00000558555 EXOSC9Q06265 439 aaKnown RBP30.9■■■□□ 2.54
MEIS3-204ENST00000558555 SIPA1L3O60292 1781 aaPredicted RBP30.88■■■□□ 2.53
MEIS3-204ENST00000558555 CT47B1P0C2W7 299 aaPredicted RBP30.88■■■□□ 2.53
MEIS3-204ENST00000558555 MIS18AQ9NYP9 233 aa30.88■■■□□ 2.53
MEIS3-204ENST00000558555 SLC52A2Q9HAB3 445 aa30.87■■■□□ 2.53
MEIS3-204ENST00000558555 MRC1P22897 1456 aa30.85■■■□□ 2.53
MEIS3-204ENST00000558555 CABP4P57796 275 aa30.85■■■□□ 2.53
MEIS3-204ENST00000558555 BTBD11A6QL63 1104 aa30.84■■■□□ 2.53
MEIS3-204ENST00000558555 ERVV-2B6SEH9 535 aa30.84■■■□□ 2.53
MEIS3-204ENST00000558555 SUPT16HQ9Y5B9 1047 aaKnown RBP30.84■■■□□ 2.53
MEIS3-204ENST00000558555 THSD7AQ9UPZ6 1657 aa30.84■■■□□ 2.53
MEIS3-204ENST00000558555 KRT27Q7Z3Y8 459 aa30.84■■■□□ 2.53
MEIS3-204ENST00000558555 KDM3BQ7LBC6 1761 aa30.83■■■□□ 2.53
MEIS3-204ENST00000558555 NFATC2IPQ8NCF5 419 aa30.81■■■□□ 2.52
MEIS3-204ENST00000558555 FAM182BQ5T319 152 aa30.81■■■□□ 2.52
MEIS3-204ENST00000558555 TOGARAM1Q9Y4F4 1720 aa30.78■■■□□ 2.52
MEIS3-204ENST00000558555 TWISTNBQ3B726 338 aaPredicted RBP30.78■■■□□ 2.52
MEIS3-204ENST00000558555 C8orf58Q8NAV2 365 aa30.78■■■□□ 2.52
MEIS3-204ENST00000558555 MARCH10Q8NA82 808 aaPredicted RBP30.77■■■□□ 2.52
MEIS3-204ENST00000558555 ZNF428Q96B54 188 aa30.77■■■□□ 2.52
MEIS3-204ENST00000558555 KAT6BQ8WYB5 2073 aa30.77■■■□□ 2.52
MEIS3-204ENST00000558555 ELL2O00472 640 aaPredicted RBP30.76■■■□□ 2.51
MEIS3-204ENST00000558555 TSPYL6Q8N831 410 aa30.75■■■□□ 2.51
MEIS3-204ENST00000558555 TMOD3Q9NYL9 352 aa30.75■■■□□ 2.51
MEIS3-204ENST00000558555 RARSP54136 660 aaKnown RBP30.74■■■□□ 2.51
MEIS3-204ENST00000558555 ITGB4P16144 1822 aa30.73■■■□□ 2.51
MEIS3-204ENST00000558555 VAMP4O75379 141 aa30.73■■■□□ 2.51
MEIS3-204ENST00000558555 DOT1LQ8TEK3 1739 aa30.72■■■□□ 2.51
MEIS3-204ENST00000558555 SOS1Q07889 1333 aaPredicted RBP30.72■■■□□ 2.51
MEIS3-204ENST00000558555 EIF4A1P60842 406 aaKnown RBP30.72■■■□□ 2.51
MEIS3-204ENST00000558555 KRT24Q2M2I5 525 aa30.72■■■□□ 2.51
MEIS3-204ENST00000558555 ZNF790Q6PG37 636 aa30.72■■■□□ 2.51
MEIS3-204ENST00000558555 TTC5Q8N0Z6 440 aa30.72■■■□□ 2.51
MEIS3-204ENST00000558555 KCNQ3O43525 872 aa30.7■■■□□ 2.51
MEIS3-204ENST00000558555 NEFLP07196 543 aa30.7■■■□□ 2.51
MEIS3-204ENST00000558555 RNF123Q5XPI4 1314 aa30.7■■■□□ 2.5
MEIS3-204ENST00000558555 SLC39A6Q13433 755 aa30.7■■■□□ 2.5
MEIS3-204ENST00000558555 ALDH1L2Q3SY69 923 aa30.69■■■□□ 2.5
MEIS3-204ENST00000558555 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.69■■■□□ 2.5
MEIS3-204ENST00000558555 RRP1P56182 461 aaKnown RBP30.68■■■□□ 2.5
MEIS3-204ENST00000558555 BCAR3O75815 825 aa30.67■■■□□ 2.5
MEIS3-204ENST00000558555 CCDC125Q86Z20 511 aa30.67■■■□□ 2.5
MEIS3-204ENST00000558555 SMC4Q9NTJ3 1288 aa30.67■■■□□ 2.5
MEIS3-204ENST00000558555 SYTL4Q96C24 671 aaPredicted RBP30.67■■■□□ 2.5
MEIS3-204ENST00000558555 SSH1Q8WYL5 1049 aa30.66■■■□□ 2.5
MEIS3-204ENST00000558555 CHMP4AQ9BY43 222 aa30.66■■■□□ 2.5
MEIS3-204ENST00000558555 PAPPAQ13219 1627 aa30.66■■■□□ 2.5
MEIS3-204ENST00000558555 HOXB7P09629 217 aa30.65■■■□□ 2.5
MEIS3-204ENST00000558555 PRIM1P49642 420 aaKnown RBP30.65■■■□□ 2.5
MEIS3-204ENST00000558555 PIGBQ92521 554 aa30.65■■■□□ 2.5
MEIS3-204ENST00000558555 BCL2L13Q9BXK5 485 aa30.65■■■□□ 2.5
MEIS3-204ENST00000558555 BCL9O00512 1426 aa30.65■■■□□ 2.5
MEIS3-204ENST00000558555 FMNL2Q96PY5 1086 aa30.64■■■□□ 2.5
MEIS3-204ENST00000558555 DEFB132Q7Z7B7 95 aa30.63■■■□□ 2.49
MEIS3-204ENST00000558555 ACSBG1Q96GR2 724 aa30.62■■■□□ 2.49
MEIS3-204ENST00000558555 HEG1Q9ULI3 1381 aa30.62■■■□□ 2.49
MEIS3-204ENST00000558555 CANXP27824 592 aaKnown RBP30.61■■■□□ 2.49
MEIS3-204ENST00000558555 UBR2Q8IWV8 1755 aa30.61■■■□□ 2.49
MEIS3-204ENST00000558555 GIGYF1O75420 1035 aaPredicted RBP30.6■■■□□ 2.49
MEIS3-204ENST00000558555 CCDC30Q5VVM6 783 aa30.6■■■□□ 2.49
MEIS3-204ENST00000558555 ZNF496Q96IT1 587 aaPredicted RBP30.6■■■□□ 2.49
MEIS3-204ENST00000558555 SF3B2Q13435 895 aaKnown RBP30.59■■■□□ 2.49
MEIS3-204ENST00000558555 KIF16BQ96L93 1317 aa30.59■■■□□ 2.49
MEIS3-204ENST00000558555 FRAT1Q92837 279 aaPredicted RBP30.59■■■□□ 2.49
MEIS3-204ENST00000558555 PLIN1O60240 522 aa30.58■■■□□ 2.49
MEIS3-204ENST00000558555 HDGFL1Q5TGJ6 251 aa30.58■■■□□ 2.49
MEIS3-204ENST00000558555 STK31Q9BXU1 1019 aa30.58■■■□□ 2.49
MEIS3-204ENST00000558555 TCERG1O14776 1098 aaKnown RBP30.57■■■□□ 2.48
MEIS3-204ENST00000558555 SNRPA1P09661 255 aaKnown RBP30.57■■■□□ 2.48
MEIS3-204ENST00000558555 BRPF1P55201 1214 aaPredicted RBP30.57■■■□□ 2.48
MEIS3-204ENST00000558555 MRPL50Q8N5N7 158 aaKnown RBP30.56■■■□□ 2.48
MEIS3-204ENST00000558555 ASAP1Q9ULH1 1129 aa30.56■■■□□ 2.48
MEIS3-204ENST00000558555 CACNA1FO60840 1977 aa30.56■■■□□ 2.48
MEIS3-204ENST00000558555 KCPQ6ZWJ8 1503 aa30.56■■■□□ 2.48
MEIS3-204ENST00000558555 FAM196AQ6ZSG2 479 aa30.56■■■□□ 2.48
MEIS3-204ENST00000558555 ATG3Q9NT62 314 aa30.56■■■□□ 2.48
MEIS3-204ENST00000558555 EIF2S2P20042 333 aaKnown RBP30.55■■■□□ 2.48
MEIS3-204ENST00000558555 IPO8O15397 1037 aaKnown RBP30.54■■■□□ 2.48
MEIS3-204ENST00000558555 PTCD1O75127 700 aaKnown RBP30.54■■■□□ 2.48
MEIS3-204ENST00000558555 NECTIN2Q92692 538 aa30.54■■■□□ 2.48
MEIS3-204ENST00000558555 TRIM37O94972 964 aa30.53■■■□□ 2.48
MEIS3-204ENST00000558555 C5P01031 1676 aa30.53■■■□□ 2.48
MEIS3-204ENST00000558555 IRX6P78412 446 aaPredicted RBP30.53■■■□□ 2.48
MEIS3-204ENST00000558555 TNS1Q9HBL0 1735 aaKnown RBP30.53■■■□□ 2.48
MEIS3-204ENST00000558555 NHSQ6T4R5 1651 aa30.53■■■□□ 2.48
MEIS3-204ENST00000558555 ZKSCAN2Q63HK3 967 aa30.52■■■□□ 2.48
MEIS3-204ENST00000558555 GTF3C3Q9Y5Q9 886 aa30.52■■■□□ 2.48
MEIS3-204ENST00000558555 KCNQ2O43526 872 aa30.51■■■□□ 2.47
MEIS3-204ENST00000558555 FKBP8Q14318 412 aa30.51■■■□□ 2.47
MEIS3-204ENST00000558555 NOB1Q9ULX3 412 aaKnown RBP30.51■■■□□ 2.47
MEIS3-204ENST00000558555 SBF2Q86WG5 1849 aa30.51■■■□□ 2.47
MEIS3-204ENST00000558555 LAMB4A4D0S4 1761 aa30.51■■■□□ 2.47
MEIS3-204ENST00000558555 SLC4A2P04920 1241 aa30.5■■■□□ 2.47
MEIS3-204ENST00000558555 SRCAPQ6ZRS2 3230 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms