RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 TSR2Q969E8 191 aaKnown RBP19.26■□□□□ 0.67
VPS18-202ENST00000558474 RBM6P78332 1123 aaKnown RBP19.25■□□□□ 0.67
VPS18-202ENST00000558474 BCL9O00512 1426 aa19.25■□□□□ 0.67
VPS18-202ENST00000558474 ITGB4P16144 1822 aa19.24■□□□□ 0.67
VPS18-202ENST00000558474 BTBD11A6QL63 1104 aa19.24■□□□□ 0.67
VPS18-202ENST00000558474 CABP4P57796 275 aa19.24■□□□□ 0.67
VPS18-202ENST00000558474 EXOSC9Q06265 439 aaKnown RBP19.24■□□□□ 0.67
VPS18-202ENST00000558474 CHMP4AQ9BY43 222 aa19.23■□□□□ 0.67
VPS18-202ENST00000558474 RCAN3Q9UKA8 241 aa19.23■□□□□ 0.67
VPS18-202ENST00000558474 PAPPAQ13219 1627 aa19.22■□□□□ 0.67
VPS18-202ENST00000558474 MARCH10Q8NA82 808 aaPredicted RBP19.22■□□□□ 0.67
VPS18-202ENST00000558474 NFATC2IPQ8NCF5 419 aa19.22■□□□□ 0.67
VPS18-202ENST00000558474 DOT1LQ8TEK3 1739 aa19.22■□□□□ 0.67
VPS18-202ENST00000558474 HOXB7P09629 217 aa19.21■□□□□ 0.67
VPS18-202ENST00000558474 SEPT12Q8IYM1 358 aa19.2■□□□□ 0.66
VPS18-202ENST00000558474 UBR2Q8IWV8 1755 aa19.19■□□□□ 0.66
VPS18-202ENST00000558474 A0A0G2JS52 829 aa19.19■□□□□ 0.66
VPS18-202ENST00000558474 MYT1Q01538 1121 aa19.19■□□□□ 0.66
VPS18-202ENST00000558474 TWISTNBQ3B726 338 aaPredicted RBP19.19■□□□□ 0.66
VPS18-202ENST00000558474 ALDH1L2Q3SY69 923 aa19.19■□□□□ 0.66
VPS18-202ENST00000558474 ZNF790Q6PG37 636 aa19.19■□□□□ 0.66
VPS18-202ENST00000558474 TMOD3Q9NYL9 352 aa19.19■□□□□ 0.66
VPS18-202ENST00000558474 MIS18AQ9NYP9 233 aa19.19■□□□□ 0.66
VPS18-202ENST00000558474 VAMP4O75379 141 aa19.18■□□□□ 0.66
VPS18-202ENST00000558474 RXRBP28702 533 aa19.18■□□□□ 0.66
VPS18-202ENST00000558474 EIF4A1P60842 406 aaKnown RBP19.18■□□□□ 0.66
VPS18-202ENST00000558474 HEG1Q9ULI3 1381 aa19.18■□□□□ 0.66
VPS18-202ENST00000558474 TTC5Q8N0Z6 440 aa19.17■□□□□ 0.66
VPS18-202ENST00000558474 C8orf58Q8NAV2 365 aa19.17■□□□□ 0.66
VPS18-202ENST00000558474 RNF123Q5XPI4 1314 aa19.17■□□□□ 0.66
VPS18-202ENST00000558474 RARSP54136 660 aaKnown RBP19.16■□□□□ 0.66
VPS18-202ENST00000558474 RGS17Q9UGC6 210 aaPredicted RBP19.16■□□□□ 0.66
VPS18-202ENST00000558474 BRWD3Q6RI45 1802 aa19.16■□□□□ 0.66
VPS18-202ENST00000558474 CACNA1FO60840 1977 aa19.15■□□□□ 0.66
VPS18-202ENST00000558474 BRPF1P55201 1214 aaPredicted RBP19.15■□□□□ 0.66
VPS18-202ENST00000558474 NHSQ6T4R5 1651 aa19.14■□□□□ 0.66
VPS18-202ENST00000558474 TSPYL6Q8N831 410 aa19.14■□□□□ 0.65
VPS18-202ENST00000558474 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.14■□□□□ 0.65
VPS18-202ENST00000558474 PIGBQ92521 554 aa19.14■□□□□ 0.65
VPS18-202ENST00000558474 FMNL2Q96PY5 1086 aa19.14■□□□□ 0.65
VPS18-202ENST00000558474 SBF2Q86WG5 1849 aa19.14■□□□□ 0.65
VPS18-202ENST00000558474 KRT27Q7Z3Y8 459 aa19.13■□□□□ 0.65
VPS18-202ENST00000558474 ILDR1Q86SU0 546 aaPredicted RBP19.13■□□□□ 0.65
VPS18-202ENST00000558474 SUPT16HQ9Y5B9 1047 aaKnown RBP19.13■□□□□ 0.65
VPS18-202ENST00000558474 KCPQ6ZWJ8 1503 aa19.12■□□□□ 0.65
VPS18-202ENST00000558474 PRIM1P49642 420 aaKnown RBP19.12■□□□□ 0.65
VPS18-202ENST00000558474 LAMB4A4D0S4 1761 aa19.11■□□□□ 0.65
VPS18-202ENST00000558474 KCNQ3O43525 872 aa19.11■□□□□ 0.65
VPS18-202ENST00000558474 GIGYF1O75420 1035 aaPredicted RBP19.11■□□□□ 0.65
VPS18-202ENST00000558474 SLC39A6Q13433 755 aa19.11■□□□□ 0.65
VPS18-202ENST00000558474 VSIG10Q8N0Z9 540 aa19.11■□□□□ 0.65
VPS18-202ENST00000558474 ZNF831Q5JPB2 1677 aa19.11■□□□□ 0.65
VPS18-202ENST00000558474 SNRPA1P09661 255 aaKnown RBP19.1■□□□□ 0.65
VPS18-202ENST00000558474 CCDC30Q5VVM6 783 aa19.1■□□□□ 0.65
VPS18-202ENST00000558474 FAM196AQ6ZSG2 479 aa19.1■□□□□ 0.65
VPS18-202ENST00000558474 SMARCC1Q92922 1105 aaPredicted RBP19.1■□□□□ 0.65
VPS18-202ENST00000558474 CICQ96RK0 1608 aaPredicted RBP19.1■□□□□ 0.65
VPS18-202ENST00000558474 KIF16BQ96L93 1317 aa19.09■□□□□ 0.65
VPS18-202ENST00000558474 KAT6BQ8WYB5 2073 aa19.09■□□□□ 0.65
VPS18-202ENST00000558474 ELL2O00472 640 aaPredicted RBP19.09■□□□□ 0.65
VPS18-202ENST00000558474 RRP1P56182 461 aaKnown RBP19.09■□□□□ 0.65
VPS18-202ENST00000558474 KRT24Q2M2I5 525 aa19.09■□□□□ 0.65
VPS18-202ENST00000558474 POTEAQ6S8J7 498 aa19.09■□□□□ 0.65
VPS18-202ENST00000558474 SSH1Q8WYL5 1049 aa19.09■□□□□ 0.65
VPS18-202ENST00000558474 SYTL4Q96C24 671 aaPredicted RBP19.09■□□□□ 0.65
VPS18-202ENST00000558474 ZNF496Q96IT1 587 aaPredicted RBP19.09■□□□□ 0.65
VPS18-202ENST00000558474 ATG3Q9NT62 314 aa19.09■□□□□ 0.65
VPS18-202ENST00000558474 TEX13AQ9BXU3 409 aaPredicted RBP19.08■□□□□ 0.64
VPS18-202ENST00000558474 SMC4Q9NTJ3 1288 aa19.08■□□□□ 0.64
VPS18-202ENST00000558474 RGS12O14924 1447 aa19.08■□□□□ 0.64
VPS18-202ENST00000558474 C5P01031 1676 aa19.08■□□□□ 0.64
VPS18-202ENST00000558474 BCAR3O75815 825 aa19.07■□□□□ 0.64
VPS18-202ENST00000558474 ACSBG1Q96GR2 724 aa19.07■□□□□ 0.64
VPS18-202ENST00000558474 STK31Q9BXU1 1019 aa19.07■□□□□ 0.64
VPS18-202ENST00000558474 IPO8O15397 1037 aaKnown RBP19.06■□□□□ 0.64
VPS18-202ENST00000558474 MS4A1P11836 297 aa19.06■□□□□ 0.64
VPS18-202ENST00000558474 HDGFL1Q5TGJ6 251 aa19.06■□□□□ 0.64
VPS18-202ENST00000558474 MRPL50Q8N5N7 158 aaKnown RBP19.06■□□□□ 0.64
VPS18-202ENST00000558474 ARHGAP45Q92619 1136 aa19.06■□□□□ 0.64
VPS18-202ENST00000558474 ASAP1Q9ULH1 1129 aa19.06■□□□□ 0.64
VPS18-202ENST00000558474 BTAF1O14981 1849 aa19.06■□□□□ 0.64
VPS18-202ENST00000558474 ERBB4Q15303 1308 aa19.05■□□□□ 0.64
VPS18-202ENST00000558474 NEFLP07196 543 aa19.04■□□□□ 0.64
VPS18-202ENST00000558474 BCL11BQ9C0K0 894 aaPredicted RBP19.04■□□□□ 0.64
VPS18-202ENST00000558474 ZKSCAN2Q63HK3 967 aa19.03■□□□□ 0.64
VPS18-202ENST00000558474 DBF4Q9UBU7 674 aaPredicted RBP19.03■□□□□ 0.64
VPS18-202ENST00000558474 PTPRCP08575 1304 aa19.02■□□□□ 0.64
VPS18-202ENST00000558474 KCNQ2O43526 872 aa19.02■□□□□ 0.64
VPS18-202ENST00000558474 PDE3AQ14432 1141 aa19.02■□□□□ 0.64
VPS18-202ENST00000558474 LY75O60449 1722 aa19.01■□□□□ 0.63
VPS18-202ENST00000558474 PTCD1O75127 700 aaKnown RBP19.01■□□□□ 0.63
VPS18-202ENST00000558474 SLC4A2P04920 1241 aa19.01■□□□□ 0.63
VPS18-202ENST00000558474 HMGB2P26583 209 aaKnown RBP19.01■□□□□ 0.63
VPS18-202ENST00000558474 CANXP27824 592 aaKnown RBP19.01■□□□□ 0.63
VPS18-202ENST00000558474 ERICH6BQ5W0A0 696 aa19.01■□□□□ 0.63
VPS18-202ENST00000558474 BCL2L13Q9BXK5 485 aa19.01■□□□□ 0.63
VPS18-202ENST00000558474 PALLDQ8WX93 1383 aa19.01■□□□□ 0.63
VPS18-202ENST00000558474 TJP1Q07157 1748 aa19■□□□□ 0.63
VPS18-202ENST00000558474 EIF2S2P20042 333 aaKnown RBP19■□□□□ 0.63
VPS18-202ENST00000558474 DDX21Q9NR30 783 aaKnown RBP eCLIP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms