RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 TGFB2P61812 414 aa7.31□□□□□ -1.24
SPG11-208ENST00000558155 NBPF6Q5VWK0 638 aa7.31□□□□□ -1.24
SPG11-208ENST00000558155 C16orf71Q8IYS4 520 aaPredicted RBP7.31□□□□□ -1.24
SPG11-208ENST00000558155 NBPF4Q96M43 638 aa7.31□□□□□ -1.24
SPG11-208ENST00000558155 SIN3AQ96ST3 1273 aa7.31□□□□□ -1.24
SPG11-208ENST00000558155 CARD11Q9BXL7 1154 aa7.31□□□□□ -1.24
SPG11-208ENST00000558155 DOT1LQ8TEK3 1739 aa7.3□□□□□ -1.24
SPG11-208ENST00000558155 NSD3Q9BZ95 1437 aa7.3□□□□□ -1.24
SPG11-208ENST00000558155 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.3□□□□□ -1.24
SPG11-208ENST00000558155 FBLN1P23142 703 aa7.3□□□□□ -1.24
SPG11-208ENST00000558155 SSFA2P28290 1259 aa7.3□□□□□ -1.24
SPG11-208ENST00000558155 ARHGAP27Q6ZUM4 889 aa7.3□□□□□ -1.24
SPG11-208ENST00000558155 PALLDQ8WX93 1383 aa7.3□□□□□ -1.24
SPG11-208ENST00000558155 CD163L1Q9NR16 1453 aa7.3□□□□□ -1.24
SPG11-208ENST00000558155 PCDH11XQ9BZA7 1347 aa7.29□□□□□ -1.24
SPG11-208ENST00000558155 PCDH11YQ9BZA8 1340 aa7.29□□□□□ -1.24
SPG11-208ENST00000558155 POTEJP0CG39 1038 aa7.29□□□□□ -1.24
SPG11-208ENST00000558155 NLGN1Q8N2Q7 840 aa7.29□□□□□ -1.24
SPG11-208ENST00000558155 USHBP1Q8N6Y0 703 aa7.29□□□□□ -1.24
SPG11-208ENST00000558155 RBM46Q8TBY0 533 aaKnown RBP7.29□□□□□ -1.24
SPG11-208ENST00000558155 BCS1LQ9Y276 419 aa7.29□□□□□ -1.24
SPG11-208ENST00000558155 A0A1W2PP64 1363 aa7.29□□□□□ -1.24
SPG11-208ENST00000558155 C5P01031 1676 aa7.28□□□□□ -1.24
SPG11-208ENST00000558155 RGPD2P0DJD1 1756 aa7.28□□□□□ -1.24
SPG11-208ENST00000558155 MEGF6O75095 1541 aa7.28□□□□□ -1.24
SPG11-208ENST00000558155 LOC102724428A0A0B4J2F2 783 aa7.28□□□□□ -1.24
SPG11-208ENST00000558155 SIK1P57059 783 aa7.28□□□□□ -1.24
SPG11-208ENST00000558155 FSTL1Q12841 308 aa7.28□□□□□ -1.24
SPG11-208ENST00000558155 RRS1Q15050 365 aaKnown RBP7.28□□□□□ -1.24
SPG11-208ENST00000558155 TRAPPC3LQ5T215 181 aa7.28□□□□□ -1.24
SPG11-208ENST00000558155 PIGBQ92521 554 aa7.28□□□□□ -1.24
SPG11-208ENST00000558155 KLRG1Q96E93 195 aa7.28□□□□□ -1.24
SPG11-208ENST00000558155 TAF1LQ8IZX4 1826 aa7.28□□□□□ -1.24
SPG11-208ENST00000558155 SMG6Q86US8 1419 aaKnown RBP7.27□□□□□ -1.24
SPG11-208ENST00000558155 A0A0G2JLW4 131 aa7.27□□□□□ -1.25
SPG11-208ENST00000558155 GNPATO15228 680 aa7.27□□□□□ -1.25
SPG11-208ENST00000558155 CYP27B1O15528 508 aa7.27□□□□□ -1.25
SPG11-208ENST00000558155 FCHSD2O94868 740 aa7.27□□□□□ -1.25
SPG11-208ENST00000558155 MMP10P09238 476 aa7.27□□□□□ -1.25
SPG11-208ENST00000558155 ATP6V1AP38606 617 aa7.27□□□□□ -1.25
SPG11-208ENST00000558155 TMF1P82094 1093 aa7.27□□□□□ -1.25
SPG11-208ENST00000558155 NKX1-1Q15270 411 aaPredicted RBP7.27□□□□□ -1.25
SPG11-208ENST00000558155 COL13A1Q5TAT6 717 aaPredicted RBP7.27□□□□□ -1.25
SPG11-208ENST00000558155 SMIM5Q71RC9 77 aa7.27□□□□□ -1.25
SPG11-208ENST00000558155 JMYQ8N9B5 988 aa7.27□□□□□ -1.25
SPG11-208ENST00000558155 NMRK2Q9NPI5 230 aa7.27□□□□□ -1.25
SPG11-208ENST00000558155 CCDC87Q9NVE4 849 aa7.27□□□□□ -1.25
SPG11-208ENST00000558155 SPG7Q9UQ90 795 aa7.27□□□□□ -1.25
SPG11-208ENST00000558155 RTL1A6NKG5 1358 aa7.27□□□□□ -1.25
SPG11-208ENST00000558155 POTEMA6NI47 508 aa7.26□□□□□ -1.25
SPG11-208ENST00000558155 FYB1O15117 783 aa7.26□□□□□ -1.25
SPG11-208ENST00000558155 PRELPP51888 382 aa7.26□□□□□ -1.25
SPG11-208ENST00000558155 HSP90AB2PQ58FF8 381 aa7.26□□□□□ -1.25
SPG11-208ENST00000558155 AMIGO3Q86WK7 504 aa7.26□□□□□ -1.25
SPG11-208ENST00000558155 TNS4Q8IZW8 715 aa7.26□□□□□ -1.25
SPG11-208ENST00000558155 LINC00116Q8NCU8 138 aa7.26□□□□□ -1.25
SPG11-208ENST00000558155 TMOD3Q9NYL9 352 aa7.26□□□□□ -1.25
SPG11-208ENST00000558155 RTCBQ9Y3I0 505 aaKnown RBP7.26□□□□□ -1.25
SPG11-208ENST00000558155 PARP3Q9Y6F1 533 aa7.26□□□□□ -1.25
SPG11-208ENST00000558155 C4BP0C0L5 1744 aa7.26□□□□□ -1.25
SPG11-208ENST00000558155 KDM2BQ8NHM5 1336 aa7.26□□□□□ -1.25
SPG11-208ENST00000558155 INSRP06213 1382 aa7.25□□□□□ -1.25
SPG11-208ENST00000558155 DPEP1P16444 411 aa7.25□□□□□ -1.25
SPG11-208ENST00000558155 C9orf131Q5VYM1 1079 aa7.25□□□□□ -1.25
SPG11-208ENST00000558155 GGNBP2Q9H3C7 697 aa7.25□□□□□ -1.25
SPG11-208ENST00000558155 RRAGCQ9HB90 399 aa7.25□□□□□ -1.25
SPG11-208ENST00000558155 PIM2Q9P1W9 311 aa7.25□□□□□ -1.25
SPG11-208ENST00000558155 ASAP1Q9ULH1 1129 aa7.25□□□□□ -1.25
SPG11-208ENST00000558155 UBR3Q6ZT12 1888 aa7.25□□□□□ -1.25
SPG11-208ENST00000558155 ITGB4P16144 1822 aa7.24□□□□□ -1.25
SPG11-208ENST00000558155 KIF24Q5T7B8 1368 aa7.24□□□□□ -1.25
SPG11-208ENST00000558155 SPDYE4A6NLX3 237 aa7.24□□□□□ -1.25
SPG11-208ENST00000558155 RFC4P35249 363 aa7.24□□□□□ -1.25
SPG11-208ENST00000558155 ITPK1Q13572 414 aa7.24□□□□□ -1.25
SPG11-208ENST00000558155 RC3H1Q5TC82 1133 aaKnown RBP7.24□□□□□ -1.25
SPG11-208ENST00000558155 IFNL2Q8IZJ0 200 aa7.24□□□□□ -1.25
SPG11-208ENST00000558155 SMC1BQ8NDV3 1235 aa7.24□□□□□ -1.25
SPG11-208ENST00000558155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.24□□□□□ -1.251e-6■■■■■ 29.6
SPG11-208ENST00000558155 PLEKHG2Q9H7P9 1386 aa7.23□□□□□ -1.25
SPG11-208ENST00000558155 ST20-MTHFSA0A0A6YYL1 179 aa7.23□□□□□ -1.25
SPG11-208ENST00000558155 HTRA3P83110 453 aa7.23□□□□□ -1.25
SPG11-208ENST00000558155 DALRD3Q5D0E6 543 aaKnown RBP7.23□□□□□ -1.25
SPG11-208ENST00000558155 ARHGEF1Q92888 912 aaKnown RBP7.23□□□□□ -1.25
SPG11-208ENST00000558155 ATG3Q9NT62 314 aa7.23□□□□□ -1.25
SPG11-208ENST00000558155 CICQ96RK0 1608 aaPredicted RBP7.23□□□□□ -1.25
SPG11-208ENST00000558155 N4BP2Q86UW6 1770 aaPredicted RBP7.23□□□□□ -1.25
SPG11-208ENST00000558155 FLT4P35916 1363 aa7.22□□□□□ -1.25
SPG11-208ENST00000558155 WDR90Q96KV7 1748 aa7.22□□□□□ -1.25
SPG11-208ENST00000558155 PPM1GO15355 546 aaPredicted RBP7.22□□□□□ -1.25
SPG11-208ENST00000558155 RPS6KA4O75676 772 aa7.22□□□□□ -1.25
SPG11-208ENST00000558155 POTEGQ6S5H5 508 aa7.22□□□□□ -1.25
SPG11-208ENST00000558155 MS4A3Q96HJ5 214 aa7.22□□□□□ -1.25
SPG11-208ENST00000558155 TESK2Q96S53 571 aa7.22□□□□□ -1.25
SPG11-208ENST00000558155 RNF181Q9P0P0 153 aa7.22□□□□□ -1.25
SPG11-208ENST00000558155 PXDNLA1KZ92 1463 aa7.22□□□□□ -1.25
SPG11-208ENST00000558155 ERVV-2B6SEH9 535 aa7.21□□□□□ -1.26
SPG11-208ENST00000558155 HSP90AB1P08238 724 aaKnown RBP7.21□□□□□ -1.26
SPG11-208ENST00000558155 GYS1P13807 737 aa7.21□□□□□ -1.26
SPG11-208ENST00000558155 PHKG2P15735 406 aa7.21□□□□□ -1.26
SPG11-208ENST00000558155 KCNA3P22001 575 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms