RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 AKAP2Q9Y2D5 859 aa16.2■□□□□ 0.18
SEMA6D-208ENST00000558014 ME1P48163 572 aa16.2■□□□□ 0.18
SEMA6D-208ENST00000558014 SEC63Q9UGP8 760 aaKnown RBP16.2■□□□□ 0.18
SEMA6D-208ENST00000558014 POLD1P28340 1107 aa16.2■□□□□ 0.18
SEMA6D-208ENST00000558014 FAM83GA6ND36 823 aa16.2■□□□□ 0.18
SEMA6D-208ENST00000558014 CAGE1Q8TC20 777 aa16.2■□□□□ 0.18
SEMA6D-208ENST00000558014 VTI1AQ96AJ9 217 aa16.2■□□□□ 0.18
SEMA6D-208ENST00000558014 VAT1LQ9HCJ6 419 aa16.2■□□□□ 0.18
SEMA6D-208ENST00000558014 GRIN2AQ12879 1464 aa16.19■□□□□ 0.18
SEMA6D-208ENST00000558014 NOS1P29475 1434 aa16.19■□□□□ 0.18
SEMA6D-208ENST00000558014 IMMTQ16891 758 aaKnown RBP16.19■□□□□ 0.18
SEMA6D-208ENST00000558014 HSP90AB3PQ58FF7 597 aa16.19■□□□□ 0.18
SEMA6D-208ENST00000558014 NBPF14Q5TI25 921 aa16.19■□□□□ 0.18
SEMA6D-208ENST00000558014 TMEM57Q8N5G2 664 aa16.19■□□□□ 0.18
SEMA6D-208ENST00000558014 NAPBQ9H115 298 aa16.19■□□□□ 0.18
SEMA6D-208ENST00000558014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.19■□□□□ 0.18
SEMA6D-208ENST00000558014 MAP3K2Q9Y2U5 619 aa16.19■□□□□ 0.18
SEMA6D-208ENST00000558014 ZCRB1Q8TBF4 217 aaKnown RBP16.18■□□□□ 0.18
SEMA6D-208ENST00000558014 ZNF396Q96N95 335 aaPredicted RBP16.18■□□□□ 0.18
SEMA6D-208ENST00000558014 BLOC1S2Q6QNY1 142 aa16.18■□□□□ 0.18
SEMA6D-208ENST00000558014 NAT10Q9H0A0 1025 aaKnown RBP16.18■□□□□ 0.18
SEMA6D-208ENST00000558014 SETDB2Q96T68 719 aa16.18■□□□□ 0.18
SEMA6D-208ENST00000558014 LDHAL6AQ6ZMR3 332 aa16.18■□□□□ 0.18
SEMA6D-208ENST00000558014 WDR63Q8IWG1 891 aa16.17■□□□□ 0.18
SEMA6D-208ENST00000558014 CAMSAP2Q08AD1 1489 aa16.17■□□□□ 0.18
SEMA6D-208ENST00000558014 NOL7Q9UMY1 257 aaKnown RBP16.17■□□□□ 0.18
SEMA6D-208ENST00000558014 LRRC59Q96AG4 307 aaKnown RBP16.17■□□□□ 0.18
SEMA6D-208ENST00000558014 CTNNA3Q9UI47 895 aa16.17■□□□□ 0.18
SEMA6D-208ENST00000558014 PRPF40AO75400 957 aaKnown RBP16.17■□□□□ 0.18
SEMA6D-208ENST00000558014 MAP3K12Q12852 859 aa16.17■□□□□ 0.18
SEMA6D-208ENST00000558014 MYO1BO43795 1136 aa16.16■□□□□ 0.18
SEMA6D-208ENST00000558014 PDRG1Q9NUG6 133 aa16.16■□□□□ 0.18
SEMA6D-208ENST00000558014 PPP1R42Q7Z4L9 355 aa16.16■□□□□ 0.18
SEMA6D-208ENST00000558014 MVPQ14764 893 aaKnown RBP16.16■□□□□ 0.18
SEMA6D-208ENST00000558014 URB2Q14146 1524 aaKnown RBP16.16■□□□□ 0.18
SEMA6D-208ENST00000558014 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
SEMA6D-208ENST00000558014 WDR70Q9NW82 654 aa16.16■□□□□ 0.18
SEMA6D-208ENST00000558014 LRRFIP2Q9Y608 721 aaKnown RBP16.16■□□□□ 0.18
SEMA6D-208ENST00000558014 UBA5Q9GZZ9 404 aa16.15■□□□□ 0.18
SEMA6D-208ENST00000558014 ZNF287Q9HBT7 754 aa16.15■□□□□ 0.18
SEMA6D-208ENST00000558014 RIMBP2O15034 1052 aa16.15■□□□□ 0.18
SEMA6D-208ENST00000558014 VEZTQ9HBM0 779 aa16.15■□□□□ 0.18
SEMA6D-208ENST00000558014 DNAAF4Q8WXU2 420 aa16.15■□□□□ 0.18
SEMA6D-208ENST00000558014 NPHP3Q7Z494 1330 aa16.15■□□□□ 0.18
SEMA6D-208ENST00000558014 TTC16Q8NEE8 873 aa16.15■□□□□ 0.18
SEMA6D-208ENST00000558014 LARP1BQ659C4 914 aaKnown RBP16.15■□□□□ 0.18
SEMA6D-208ENST00000558014 CHD1LQ86WJ1 897 aa16.15■□□□□ 0.18
SEMA6D-208ENST00000558014 PICALMQ13492 652 aa16.14■□□□□ 0.18
SEMA6D-208ENST00000558014 KIF14Q15058 1648 aa16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 NEBLO76041 1014 aa16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 CDC5LQ99459 802 aaKnown RBP16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 ZNF408Q9H9D4 720 aa16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 PPFIA3O75145 1194 aa16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 TNIP1Q15025 636 aa16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 FILIP1LQ4L180 1135 aa16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 CCDC184Q52MB2 194 aa16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 CCDC144CPQ8IYA2 1237 aa16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 TRIM5Q9C035 493 aa16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 TNNT3P45378 269 aaPredicted RBP16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 CAVIN1Q6NZI2 390 aaKnown RBP16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 BMP2KQ9NSY1 1161 aaPredicted RBP16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 PLCD3Q8N3E9 789 aa16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 PARP3Q9Y6F1 533 aa16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 FAM135AQ9P2D6 1515 aa16.14■□□□□ 0.17
SEMA6D-208ENST00000558014 JAG2Q9Y219 1238 aa16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 CASTP20810 708 aaKnown RBP16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 KAT6BQ8WYB5 2073 aa16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 SSR1P43307 286 aaKnown RBP16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 CCDC173Q0VFZ6 552 aa16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 MPNDQ8N594 471 aa16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 NIP7Q9Y221 180 aaKnown RBP eCLIP16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 PDCP20941 246 aa16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 CWC25Q9NXE8 425 aaPredicted RBP16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 BTG4Q9NY30 223 aa16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 GJA3Q9Y6H8 435 aa16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 RAB11FIP4Q86YS3 637 aa16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 HYPKQ9NX55 129 aa16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 DBF4Q9UBU7 674 aaPredicted RBP16.13■□□□□ 0.17
SEMA6D-208ENST00000558014 RUFY1Q96T51 708 aa16.12■□□□□ 0.17
SEMA6D-208ENST00000558014 PRPF40BQ6NWY9 871 aaKnown RBP16.12■□□□□ 0.17
SEMA6D-208ENST00000558014 GUCY1B3Q02153 619 aa16.12■□□□□ 0.17
SEMA6D-208ENST00000558014 CUL5Q93034 780 aa16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 SERPINC1P01008 464 aa16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 DEF6Q9H4E7 631 aa16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 CABP5Q9NP86 173 aa16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 PCF11O94913 1555 aaKnown RBP16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 SLF2Q8IX21 1173 aa16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 JMYQ8N9B5 988 aa16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 CDKL5O76039 1030 aa16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 ANKRD1Q15327 319 aa16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 LARP6Q9BRS8 491 aaKnown RBP16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 ZRANB1Q9UGI0 708 aa16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 GOLIM4O00461 696 aa16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 DDX17Q92841 729 aaKnown RBP16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 FAM13BQ9NYF5 915 aa16.11■□□□□ 0.17
SEMA6D-208ENST00000558014 STIM1Q13586 685 aa16.1■□□□□ 0.17
SEMA6D-208ENST00000558014 PPP4R3AQ6IN85 833 aa16.1■□□□□ 0.17
SEMA6D-208ENST00000558014 KIF1BPQ96EK5 621 aa16.1■□□□□ 0.17
SEMA6D-208ENST00000558014 MNS1Q8NEH6 495 aa16.1■□□□□ 0.17
SEMA6D-208ENST00000558014 SIRT1Q96EB6 747 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms