RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 EVA1CP58658 441 aa12.23□□□□□ -0.45
CHD8-214ENST00000557727 NBPF6Q5VWK0 638 aa12.23□□□□□ -0.45
CHD8-214ENST00000557727 BARGINQ6ZT62 677 aa12.23□□□□□ -0.45
CHD8-214ENST00000557727 NBPF4Q96M43 638 aa12.23□□□□□ -0.45
CHD8-214ENST00000557727 PRKRIP1Q9H875 184 aaPredicted RBP12.23□□□□□ -0.45
CHD8-214ENST00000557727 PPM1GO15355 546 aaPredicted RBP12.22□□□□□ -0.45
CHD8-214ENST00000557727 IL13P35225 146 aa12.22□□□□□ -0.45
CHD8-214ENST00000557727 TOM1L2Q6ZVM7 507 aa12.22□□□□□ -0.45
CHD8-214ENST00000557727 TCP11L2Q8N4U5 519 aa12.22□□□□□ -0.45
CHD8-214ENST00000557727 LTV1Q96GA3 475 aaPredicted RBP12.22□□□□□ -0.45
CHD8-214ENST00000557727 BOLA1Q9Y3E2 137 aa12.22□□□□□ -0.45
CHD8-214ENST00000557727 SBF2Q86WG5 1849 aa12.22□□□□□ -0.45
CHD8-214ENST00000557727 IGSF1Q8N6C5 1336 aa12.21□□□□□ -0.45
CHD8-214ENST00000557727 G3V3G9 751 aa12.21□□□□□ -0.45
CHD8-214ENST00000557727 RALBP1Q15311 655 aa12.21□□□□□ -0.45
CHD8-214ENST00000557727 FAM98CQ17RN3 349 aaKnown RBP12.21□□□□□ -0.45
CHD8-214ENST00000557727 EYA1Q99502 592 aa12.21□□□□□ -0.45
CHD8-214ENST00000557727 THRAP3Q9Y2W1 955 aaKnown RBP12.21□□□□□ -0.45
CHD8-214ENST00000557727 KDRP35968 1356 aa12.2□□□□□ -0.46
CHD8-214ENST00000557727 CSB-PGBD3P0DP91 1061 aa12.2□□□□□ -0.46
CHD8-214ENST00000557727 NLRP2Q9NX02 1062 aa12.2□□□□□ -0.46
CHD8-214ENST00000557727 USP35Q9P2H5 1018 aa12.2□□□□□ -0.46
CHD8-214ENST00000557727 VIRMAQ69YN4 1812 aaKnown RBP12.2□□□□□ -0.46
CHD8-214ENST00000557727 OVOS2A0A0G2JMS6 1433 aa12.2□□□□□ -0.46
CHD8-214ENST00000557727 MYBBP1AQ9BQG0 1328 aaKnown RBP12.19□□□□□ -0.46
CHD8-214ENST00000557727 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
CHD8-214ENST00000557727 USHBP1Q8N6Y0 703 aa12.19□□□□□ -0.46
CHD8-214ENST00000557727 MARVELD3Q96A59 401 aa12.19□□□□□ -0.46
CHD8-214ENST00000557727 CCDC9Q9Y3X0 531 aaKnown RBP12.19□□□□□ -0.46
CHD8-214ENST00000557727 TNS2Q63HR2 1409 aa12.19□□□□□ -0.46
CHD8-214ENST00000557727 AEBP1Q8IUX7 1158 aa12.17□□□□□ -0.46
CHD8-214ENST00000557727 TOGARAM1Q9Y4F4 1720 aa12.17□□□□□ -0.46
CHD8-214ENST00000557727 EFCAB3Q8N7B9 438 aa12.16□□□□□ -0.46
CHD8-214ENST00000557727 TNS1Q9HBL0 1735 aaKnown RBP12.16□□□□□ -0.46
CHD8-214ENST00000557727 DIAPH1O60610 1272 aaKnown RBP12.15□□□□□ -0.46
CHD8-214ENST00000557727 IL2RBP14784 551 aa12.15□□□□□ -0.46
CHD8-214ENST00000557727 CCDC184Q52MB2 194 aa12.15□□□□□ -0.46
CHD8-214ENST00000557727 DLG5Q8TDM6 1919 aa12.15□□□□□ -0.46
CHD8-214ENST00000557727 PLEKHG2Q9H7P9 1386 aa12.15□□□□□ -0.46
CHD8-214ENST00000557727 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
CHD8-214ENST00000557727 ADAMTS7Q9UKP4 1686 aa12.14□□□□□ -0.47
CHD8-214ENST00000557727 RIOK3O14730 519 aaKnown RBP12.14□□□□□ -0.47
CHD8-214ENST00000557727 CDCA7Q9BWT1 371 aaPredicted RBP12.14□□□□□ -0.47
CHD8-214ENST00000557727 ITGB4P16144 1822 aa12.14□□□□□ -0.47
CHD8-214ENST00000557727 BCL9O00512 1426 aa12.13□□□□□ -0.47
CHD8-214ENST00000557727 EMP3P54852 163 aa12.13□□□□□ -0.47
CHD8-214ENST00000557727 MARCH10Q8NA82 808 aaPredicted RBP12.13□□□□□ -0.47
CHD8-214ENST00000557727 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
CHD8-214ENST00000557727 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
CHD8-214ENST00000557727 KAT6BQ8WYB5 2073 aa12.12□□□□□ -0.47
CHD8-214ENST00000557727 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
CHD8-214ENST00000557727 DDB1Q16531 1140 aa12.11□□□□□ -0.47
CHD8-214ENST00000557727 FAM182BQ5T319 152 aa12.11□□□□□ -0.47
CHD8-214ENST00000557727 KRT27Q7Z3Y8 459 aa12.11□□□□□ -0.47
CHD8-214ENST00000557727 CFAP53Q96M91 514 aa12.11□□□□□ -0.47
CHD8-214ENST00000557727 RSPH6AQ9H0K4 717 aa12.11□□□□□ -0.47
CHD8-214ENST00000557727 HMOX1P09601 288 aa12.1□□□□□ -0.47
CHD8-214ENST00000557727 RNF25Q96BH1 459 aaPredicted RBP12.1□□□□□ -0.47
CHD8-214ENST00000557727 BTAF1O14981 1849 aa12.09□□□□□ -0.47
CHD8-214ENST00000557727 CYP27B1O15528 508 aa12.09□□□□□ -0.47
CHD8-214ENST00000557727 ANP32CO43423 234 aa12.09□□□□□ -0.47
CHD8-214ENST00000557727 HOXB3P14651 431 aaPredicted RBP12.09□□□□□ -0.47
CHD8-214ENST00000557727 TATP17735 454 aaPredicted RBP12.09□□□□□ -0.47
CHD8-214ENST00000557727 SPNS2Q8IVW8 549 aa12.09□□□□□ -0.47
CHD8-214ENST00000557727 RAPGEF4Q8WZA2 1011 aa12.09□□□□□ -0.47
CHD8-214ENST00000557727 SIPA1L3O60292 1781 aaPredicted RBP12.09□□□□□ -0.47
CHD8-214ENST00000557727 A0A0G2JS52 829 aa12.08□□□□□ -0.48
CHD8-214ENST00000557727 EXOC5O00471 708 aa12.08□□□□□ -0.48
CHD8-214ENST00000557727 U2SURPO15042 1029 aaKnown RBP12.08□□□□□ -0.48
CHD8-214ENST00000557727 MYT1Q01538 1121 aa12.08□□□□□ -0.48
CHD8-214ENST00000557727 ZCRB1Q8TBF4 217 aaKnown RBP12.08□□□□□ -0.48
CHD8-214ENST00000557727 PLEKHF1Q96S99 279 aa12.08□□□□□ -0.48
CHD8-214ENST00000557727 RGPD3A6NKT7 1758 aaPredicted RBP12.07□□□□□ -0.48
CHD8-214ENST00000557727 RGPD4Q7Z3J3 1758 aa12.07□□□□□ -0.48
CHD8-214ENST00000557727 KDM6AO15550 1401 aaPredicted RBP12.07□□□□□ -0.48
CHD8-214ENST00000557727 PHACTR3Q96KR7 559 aa12.07□□□□□ -0.48
CHD8-214ENST00000557727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.06□□□□□ -0.48
CHD8-214ENST00000557727 FCHSD2O94868 740 aa12.06□□□□□ -0.48
CHD8-214ENST00000557727 U2AF1L5P0DN76 240 aaPredicted RBP12.06□□□□□ -0.48
CHD8-214ENST00000557727 U2AF1Q01081 240 aaKnown RBP eCLIP12.06□□□□□ -0.48
CHD8-214ENST00000557727 PDE3BQ13370 1112 aa12.06□□□□□ -0.48
CHD8-214ENST00000557727 NKX1-1Q15270 411 aaPredicted RBP12.06□□□□□ -0.48
CHD8-214ENST00000557727 DIEXFQ68CQ4 756 aaKnown RBP12.06□□□□□ -0.48
CHD8-214ENST00000557727 PTF1AQ7RTS3 328 aa12.06□□□□□ -0.48
CHD8-214ENST00000557727 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
CHD8-214ENST00000557727 PCDH11XQ9BZA7 1347 aa12.06□□□□□ -0.48
CHD8-214ENST00000557727 PCDH11YQ9BZA8 1340 aa12.06□□□□□ -0.48
CHD8-214ENST00000557727 LY75O60449 1722 aa12.06□□□□□ -0.48
CHD8-214ENST00000557727 PHKG2P15735 406 aa12.05□□□□□ -0.48
CHD8-214ENST00000557727 PRKAR2BP31323 418 aa12.05□□□□□ -0.48
CHD8-214ENST00000557727 MMRN1Q13201 1228 aa12.05□□□□□ -0.48
CHD8-214ENST00000557727 PNISRQ8TF01 805 aaKnown RBP12.05□□□□□ -0.48
CHD8-214ENST00000557727 HS3ST6Q96QI5 342 aa12.05□□□□□ -0.48
CHD8-214ENST00000557727 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
CHD8-214ENST00000557727 MRC1P22897 1456 aa12.05□□□□□ -0.48
CHD8-214ENST00000557727 PAPPAQ13219 1627 aa12.04□□□□□ -0.48
CHD8-214ENST00000557727 RREB1Q92766 1687 aa12.04□□□□□ -0.48
CHD8-214ENST00000557727 FAM205CA6NFA0 338 aa12.04□□□□□ -0.48
CHD8-214ENST00000557727 MTHFSDQ2M296 383 aaKnown RBP12.04□□□□□ -0.48
CHD8-214ENST00000557727 FAM196AQ6ZSG2 479 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms