RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ERVV-2B6SEH9 535 aa21.91■■□□□ 1.1
SCFD1-224ENST00000557713 GNPATO15228 680 aa21.9■■□□□ 1.1
SCFD1-224ENST00000557713 DCAF5Q96JK2 942 aa21.9■■□□□ 1.1
SCFD1-224ENST00000557713 GIGYF1O75420 1035 aaPredicted RBP21.89■■□□□ 1.09
SCFD1-224ENST00000557713 PLEKHO1Q53GL0 409 aaPredicted RBP21.89■■□□□ 1.09
SCFD1-224ENST00000557713 SLC4A9Q96Q91 983 aa21.89■■□□□ 1.09
SCFD1-224ENST00000557713 SENP3-EIF4A1A0A087X0R7 540 aa21.88■■□□□ 1.09
SCFD1-224ENST00000557713 HSP90AB1P08238 724 aaKnown RBP21.88■■□□□ 1.09
SCFD1-224ENST00000557713 KDRP35968 1356 aa21.87■■□□□ 1.09
SCFD1-224ENST00000557713 MORC1Q86VD1 984 aa21.87■■□□□ 1.09
SCFD1-224ENST00000557713 AMOTQ4VCS5 1084 aa21.86■■□□□ 1.09
SCFD1-224ENST00000557713 RC3H1Q5TC82 1133 aaKnown RBP21.85■■□□□ 1.09
SCFD1-224ENST00000557713 ZNF530Q6P9A1 599 aaPredicted RBP21.85■■□□□ 1.09
SCFD1-224ENST00000557713 RBM42Q9BTD8 480 aaKnown RBP21.85■■□□□ 1.09
SCFD1-224ENST00000557713 KDM6AO15550 1401 aaPredicted RBP21.85■■□□□ 1.09
SCFD1-224ENST00000557713 ZNF831Q5JPB2 1677 aa21.85■■□□□ 1.09
SCFD1-224ENST00000557713 TRAPPC3LQ5T215 181 aa21.84■■□□□ 1.09
SCFD1-224ENST00000557713 AEBP1Q8IUX7 1158 aa21.84■■□□□ 1.09
SCFD1-224ENST00000557713 CABP4P57796 275 aa21.83■■□□□ 1.09
SCFD1-224ENST00000557713 RTCBQ9Y3I0 505 aaKnown RBP21.83■■□□□ 1.09
SCFD1-224ENST00000557713 ATP10DQ9P241 1426 aa21.82■■□□□ 1.08
SCFD1-224ENST00000557713 MMP10P09238 476 aa21.82■■□□□ 1.08
SCFD1-224ENST00000557713 CCER1Q8TC90 406 aaPredicted RBP21.82■■□□□ 1.08
SCFD1-224ENST00000557713 KNSTRNQ9Y448 316 aa21.82■■□□□ 1.08
SCFD1-224ENST00000557713 MTHFSP49914 203 aa21.81■■□□□ 1.08
SCFD1-224ENST00000557713 NLGN1Q8N2Q7 840 aa21.81■■□□□ 1.08
SCFD1-224ENST00000557713 ARHGEF1Q92888 912 aaKnown RBP21.81■■□□□ 1.08
SCFD1-224ENST00000557713 CNTNAP4Q9C0A0 1308 aa21.8■■□□□ 1.08
SCFD1-224ENST00000557713 ADCY9O60503 1353 aa21.8■■□□□ 1.08
SCFD1-224ENST00000557713 RPS6KA4O75676 772 aa21.8■■□□□ 1.08
SCFD1-224ENST00000557713 IL13P35225 146 aa21.8■■□□□ 1.08
SCFD1-224ENST00000557713 SULT6B1Q6IMI4 303 aa21.8■■□□□ 1.08
SCFD1-224ENST00000557713 WWC3Q9ULE0 1092 aa21.8■■□□□ 1.08
SCFD1-224ENST00000557713 ADRA2BP18089 450 aa21.79■■□□□ 1.08
SCFD1-224ENST00000557713 C1orf141Q5JVX7 400 aa21.79■■□□□ 1.08
SCFD1-224ENST00000557713 NFATC2IPQ8NCF5 419 aa21.79■■□□□ 1.08
SCFD1-224ENST00000557713 COL5A3P25940 1745 aaPredicted RBP21.79■■□□□ 1.08
SCFD1-224ENST00000557713 AMER1Q5JTC6 1135 aaPredicted RBP21.78■■□□□ 1.08
SCFD1-224ENST00000557713 GYS1P13807 737 aa21.77■■□□□ 1.08
SCFD1-224ENST00000557713 PTCD1O75127 700 aaKnown RBP21.76■■□□□ 1.07
SCFD1-224ENST00000557713 TGFB2P61812 414 aa21.76■■□□□ 1.07
SCFD1-224ENST00000557713 RFC4P35249 363 aa21.75■■□□□ 1.07
SCFD1-224ENST00000557713 GPBP1L1Q9HC44 474 aaPredicted RBP21.75■■□□□ 1.07
SCFD1-224ENST00000557713 PXDNLA1KZ92 1463 aa21.75■■□□□ 1.07
SCFD1-224ENST00000557713 KIF13BQ9NQT8 1826 aa21.75■■□□□ 1.07
SCFD1-224ENST00000557713 CICQ96RK0 1608 aaPredicted RBP21.74■■□□□ 1.07
SCFD1-224ENST00000557713 KIAA1551Q9HCM1 1747 aa21.74■■□□□ 1.07
SCFD1-224ENST00000557713 MYH14Q7Z406 1995 aaKnown RBP21.73■■□□□ 1.07
SCFD1-224ENST00000557713 KIF7Q2M1P5 1343 aa21.73■■□□□ 1.07
SCFD1-224ENST00000557713 C10orf71Q711Q0 1435 aa21.72■■□□□ 1.07
SCFD1-224ENST00000557713 A0A0G2JLW4 131 aa21.72■■□□□ 1.07
SCFD1-224ENST00000557713 CRKLP46109 303 aaKnown RBP21.72■■□□□ 1.07
SCFD1-224ENST00000557713 AKAP4Q5JQC9 854 aa21.72■■□□□ 1.07
SCFD1-224ENST00000557713 PER1O15534 1290 aaPredicted RBP21.71■■□□□ 1.07
SCFD1-224ENST00000557713 ZNF526Q8TF50 670 aaPredicted RBP21.71■■□□□ 1.07
SCFD1-224ENST00000557713 CCDC87Q9NVE4 849 aa21.71■■□□□ 1.07
SCFD1-224ENST00000557713 PARP3Q9Y6F1 533 aa21.71■■□□□ 1.07
SCFD1-224ENST00000557713 C4AP0C0L4 1744 aa21.71■■□□□ 1.07
SCFD1-224ENST00000557713 LGR6Q9HBX8 967 aa21.7■■□□□ 1.06
SCFD1-224ENST00000557713 N4BP2Q86UW6 1770 aaPredicted RBP21.69■■□□□ 1.06
SCFD1-224ENST00000557713 SCN11AQ9UI33 1791 aa21.69■■□□□ 1.06
SCFD1-224ENST00000557713 DPEP1P16444 411 aa21.69■■□□□ 1.06
SCFD1-224ENST00000557713 INTS5Q6P9B9 1019 aaKnown RBP21.69■■□□□ 1.06
SCFD1-224ENST00000557713 TJP1Q07157 1748 aa21.69■■□□□ 1.06
SCFD1-224ENST00000557713 SLC52A2Q9HAB3 445 aa21.68■■□□□ 1.06
SCFD1-224ENST00000557713 SRP68Q9UHB9 627 aaKnown RBP21.68■■□□□ 1.06
SCFD1-224ENST00000557713 BCS1LQ9Y276 419 aa21.68■■□□□ 1.06
SCFD1-224ENST00000557713 USP42Q9H9J4 1324 aaKnown RBP21.67■■□□□ 1.06
SCFD1-224ENST00000557713 KCNA3P22001 575 aa21.67■■□□□ 1.06
SCFD1-224ENST00000557713 HMOX1P09601 288 aa21.66■■□□□ 1.06
SCFD1-224ENST00000557713 FKBP8Q14318 412 aa21.66■■□□□ 1.06
SCFD1-224ENST00000557713 RNMTO43148 476 aaKnown RBP21.65■■□□□ 1.06
SCFD1-224ENST00000557713 DNAJC10Q8IXB1 793 aa21.65■■□□□ 1.06
SCFD1-224ENST00000557713 KIF3CO14782 793 aa21.64■■□□□ 1.05
SCFD1-224ENST00000557713 DDR1Q08345 913 aa21.64■■□□□ 1.05
SCFD1-224ENST00000557713 MTHFSDQ2M296 383 aaKnown RBP21.64■■□□□ 1.05
SCFD1-224ENST00000557713 ADAMTS7Q9UKP4 1686 aa21.63■■□□□ 1.05
SCFD1-224ENST00000557713 DIAPH1O60610 1272 aaKnown RBP21.63■■□□□ 1.05
SCFD1-224ENST00000557713 FCHSD2O94868 740 aa21.63■■□□□ 1.05
SCFD1-224ENST00000557713 TM4SF1P30408 202 aa21.63■■□□□ 1.05
SCFD1-224ENST00000557713 ARHGAP27Q6ZUM4 889 aa21.63■■□□□ 1.05
SCFD1-224ENST00000557713 MRC1P22897 1456 aa21.63■■□□□ 1.05
SCFD1-224ENST00000557713 CYP19A1P11511 503 aaPredicted RBP21.62■■□□□ 1.05
SCFD1-224ENST00000557713 SLC39A6Q13433 755 aa21.62■■□□□ 1.05
SCFD1-224ENST00000557713 CC2D1BQ5T0F9 858 aaKnown RBP21.62■■□□□ 1.05
SCFD1-224ENST00000557713 CEP350Q5VT06 3117 aa21.61■■□□□ 1.05
SCFD1-224ENST00000557713 BRCA1P38398 1863 aaKnown RBP21.61■■□□□ 1.05
SCFD1-224ENST00000557713 HSPA6P17066 643 aa21.61■■□□□ 1.05
SCFD1-224ENST00000557713 PIM2Q9P1W9 311 aa21.61■■□□□ 1.05
SCFD1-224ENST00000557713 SOS1Q07889 1333 aaPredicted RBP21.6■■□□□ 1.05
SCFD1-224ENST00000557713 POLRMTO00411 1230 aaKnown RBP21.59■■□□□ 1.05
SCFD1-224ENST00000557713 ZPR1O75312 459 aa21.59■■□□□ 1.05
SCFD1-224ENST00000557713 USPL1Q5W0Q7 1092 aa21.59■■□□□ 1.05
SCFD1-224ENST00000557713 KCPQ6ZWJ8 1503 aa21.59■■□□□ 1.05
SCFD1-224ENST00000557713 VSIG10Q8N0Z9 540 aa21.58■■□□□ 1.05
SCFD1-224ENST00000557713 NARFQ9UHQ1 456 aa21.57■■□□□ 1.04
SCFD1-224ENST00000557713 NPC1L1Q9UHC9 1359 aa21.57■■□□□ 1.04
SCFD1-224ENST00000557713 DALRD3Q5D0E6 543 aaKnown RBP21.56■■□□□ 1.04
SCFD1-224ENST00000557713 VIRMAQ69YN4 1812 aaKnown RBP21.55■■□□□ 1.04
SCFD1-224ENST00000557713 ARFGEF1Q9Y6D6 1849 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms