RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 BTAF1O14981 1849 aa10.02□□□□□ -0.81
SPTLC2-206ENST00000557566 ACEP12821 1306 aa10.02□□□□□ -0.81
SPTLC2-206ENST00000557566 SNPHO15079 494 aa10.01□□□□□ -0.81
SPTLC2-206ENST00000557566 COL13A1Q5TAT6 717 aaPredicted RBP10.01□□□□□ -0.81
SPTLC2-206ENST00000557566 TNS4Q8IZW8 715 aa10.01□□□□□ -0.81
SPTLC2-206ENST00000557566 WDR17Q8IZU2 1322 aa10.01□□□□□ -0.81
SPTLC2-206ENST00000557566 BRD4O60885 1362 aaPredicted RBP10.01□□□□□ -0.81
SPTLC2-206ENST00000557566 TUBGCP6Q96RT7 1819 aa10□□□□□ -0.81
SPTLC2-206ENST00000557566 EXOC5O00471 708 aa10□□□□□ -0.81
SPTLC2-206ENST00000557566 TRIM26Q12899 539 aaPredicted RBP10□□□□□ -0.81
SPTLC2-206ENST00000557566 DNAJC5GQ8N7S2 189 aa10□□□□□ -0.81
SPTLC2-206ENST00000557566 ARHGEF28Q8N1W1 1705 aaKnown RBP9.99□□□□□ -0.81
SPTLC2-206ENST00000557566 WDR90Q96KV7 1748 aa9.99□□□□□ -0.81
SPTLC2-206ENST00000557566 COL18A1P39060 1754 aa9.99□□□□□ -0.81
SPTLC2-206ENST00000557566 L3MBTL3Q96JM7 780 aaPredicted RBP9.99□□□□□ -0.81
SPTLC2-206ENST00000557566 TNS2Q63HR2 1409 aa9.99□□□□□ -0.81
SPTLC2-206ENST00000557566 KIF3CO14782 793 aa9.98□□□□□ -0.81
SPTLC2-206ENST00000557566 SLC34A2O95436 690 aa9.98□□□□□ -0.81
SPTLC2-206ENST00000557566 ACSBG1Q96GR2 724 aa9.98□□□□□ -0.81
SPTLC2-206ENST00000557566 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.98□□□□□ -0.81
SPTLC2-206ENST00000557566 BOLA1Q9Y3E2 137 aa9.98□□□□□ -0.81
SPTLC2-206ENST00000557566 PNPLA7Q6ZV29 1317 aa9.98□□□□□ -0.81
SPTLC2-206ENST00000557566 RGPD5Q99666 1765 aa9.98□□□□□ -0.81
SPTLC2-206ENST00000557566 USP6P35125 1406 aa9.98□□□□□ -0.81
SPTLC2-206ENST00000557566 PLEKHG3A1L390 1219 aa9.97□□□□□ -0.81
SPTLC2-206ENST00000557566 PPP1R37O75864 691 aa9.97□□□□□ -0.81
SPTLC2-206ENST00000557566 C3orf67Q6ZVT6 689 aa9.97□□□□□ -0.81
SPTLC2-206ENST00000557566 LRRC4BQ9NT99 713 aa9.97□□□□□ -0.81
SPTLC2-206ENST00000557566 TFCP2L1Q9NZI6 479 aa9.97□□□□□ -0.81
SPTLC2-206ENST00000557566 SLIT3O75094 1523 aa9.97□□□□□ -0.81
SPTLC2-206ENST00000557566 ABCC6O95255 1503 aa9.97□□□□□ -0.81
SPTLC2-206ENST00000557566 TRPM1Q7Z4N2 1603 aa9.96□□□□□ -0.81
SPTLC2-206ENST00000557566 CSB-PGBD3P0DP91 1061 aa9.96□□□□□ -0.82
SPTLC2-206ENST00000557566 CARD10Q9BWT7 1032 aa9.96□□□□□ -0.82
SPTLC2-206ENST00000557566 CDK19Q9BWU1 502 aa9.96□□□□□ -0.82
SPTLC2-206ENST00000557566 TOMM70O94826 608 aa9.95□□□□□ -0.82
SPTLC2-206ENST00000557566 SLC27A3Q5K4L6 730 aa9.95□□□□□ -0.82
SPTLC2-206ENST00000557566 CCDC7Q96M83 1385 aa9.95□□□□□ -0.82
SPTLC2-206ENST00000557566 CPSF1Q10570 1443 aaKnown RBP9.94□□□□□ -0.82
SPTLC2-206ENST00000557566 JMYQ8N9B5 988 aa9.94□□□□□ -0.82
SPTLC2-206ENST00000557566 KLRG1Q96E93 195 aa9.94□□□□□ -0.82
SPTLC2-206ENST00000557566 AXIN2Q9Y2T1 843 aa9.94□□□□□ -0.82
SPTLC2-206ENST00000557566 CD2APQ9Y5K6 639 aa9.94□□□□□ -0.82
SPTLC2-206ENST00000557566 PIK3C2AO00443 1686 aa9.93□□□□□ -0.82
SPTLC2-206ENST00000557566 PPIP5K1Q6PFW1 1433 aa9.93□□□□□ -0.82
SPTLC2-206ENST00000557566 MICALL2Q8IY33 904 aa9.93□□□□□ -0.82
SPTLC2-206ENST00000557566 MPHOSPH9Q99550 1183 aa9.93□□□□□ -0.82
SPTLC2-206ENST00000557566 PPARGC1BQ86YN6 1023 aaKnown RBP9.91□□□□□ -0.82
SPTLC2-206ENST00000557566 LY75O60449 1722 aa9.9□□□□□ -0.82
SPTLC2-206ENST00000557566 QRICH2Q9H0J4 1663 aa9.9□□□□□ -0.82
SPTLC2-206ENST00000557566 EMP3P54852 163 aa9.9□□□□□ -0.82
SPTLC2-206ENST00000557566 ARHGEF25Q86VW2 580 aa9.9□□□□□ -0.82
SPTLC2-206ENST00000557566 WWC3Q9ULE0 1092 aa9.9□□□□□ -0.82
SPTLC2-206ENST00000557566 KCNH5Q8NCM2 988 aa9.89□□□□□ -0.83
SPTLC2-206ENST00000557566 CICQ96RK0 1608 aaPredicted RBP9.89□□□□□ -0.83
SPTLC2-206ENST00000557566 IGSF1Q8N6C5 1336 aa9.88□□□□□ -0.83
SPTLC2-206ENST00000557566 IL2RBP14784 551 aa9.88□□□□□ -0.83
SPTLC2-206ENST00000557566 SRPK2P78362 688 aaKnown RBP9.88□□□□□ -0.83
SPTLC2-206ENST00000557566 MSL1Q68DK7 614 aa9.88□□□□□ -0.83
SPTLC2-206ENST00000557566 COL23A1Q86Y22 540 aaPredicted RBP9.88□□□□□ -0.83
SPTLC2-206ENST00000557566 RBM46Q8TBY0 533 aaKnown RBP9.88□□□□□ -0.83
SPTLC2-206ENST00000557566 KCNQ4P56696 695 aa9.87□□□□□ -0.83
SPTLC2-206ENST00000557566 HTRA3P83110 453 aa9.87□□□□□ -0.83
SPTLC2-206ENST00000557566 C16orf71Q8IYS4 520 aaPredicted RBP9.86□□□□□ -0.83
SPTLC2-206ENST00000557566 STAC3Q96MF2 364 aa9.86□□□□□ -0.83
SPTLC2-206ENST00000557566 DOT1LQ8TEK3 1739 aa9.85□□□□□ -0.83
SPTLC2-206ENST00000557566 FSTL1Q12841 308 aa9.85□□□□□ -0.83
SPTLC2-206ENST00000557566 NBR1Q14596 966 aa9.85□□□□□ -0.83
SPTLC2-206ENST00000557566 DCAF11Q8TEB1 546 aa9.85□□□□□ -0.83
SPTLC2-206ENST00000557566 SYTL4Q96C24 671 aaPredicted RBP9.85□□□□□ -0.83
SPTLC2-206ENST00000557566 NMRK2Q9NPI5 230 aa9.85□□□□□ -0.83
SPTLC2-206ENST00000557566 WDR70Q9NW82 654 aa9.85□□□□□ -0.83
SPTLC2-206ENST00000557566 NLRP2Q9NX02 1062 aa9.85□□□□□ -0.83
SPTLC2-206ENST00000557566 CCNL1Q9UK58 526 aaPredicted RBP9.85□□□□□ -0.83
SPTLC2-206ENST00000557566 NFAT5O94916 1531 aa9.85□□□□□ -0.83
SPTLC2-206ENST00000557566 C5P01031 1676 aa9.84□□□□□ -0.83
SPTLC2-206ENST00000557566 FLAD1Q8NFF5 587 aa9.84□□□□□ -0.83
SPTLC2-206ENST00000557566 TMC2Q8TDI7 906 aa9.84□□□□□ -0.83
SPTLC2-206ENST00000557566 HS3ST6Q96QI5 342 aa9.84□□□□□ -0.83
SPTLC2-206ENST00000557566 KRTAP3-3Q9BYR6 98 aa9.84□□□□□ -0.83
SPTLC2-206ENST00000557566 KRTAP3-2Q9BYR7 98 aa9.84□□□□□ -0.83
SPTLC2-206ENST00000557566 ERBB3P21860 1342 aa9.83□□□□□ -0.84
SPTLC2-206ENST00000557566 FAM205CA6NFA0 338 aa9.83□□□□□ -0.84
SPTLC2-206ENST00000557566 HSPA1AP0DMV8 641 aaKnown RBP9.83□□□□□ -0.84
SPTLC2-206ENST00000557566 HSPA1BP0DMV9 641 aaKnown RBP9.83□□□□□ -0.84
SPTLC2-206ENST00000557566 HMGB2P26583 209 aaKnown RBP9.83□□□□□ -0.84
SPTLC2-206ENST00000557566 CABP1Q9NZU7 370 aa9.83□□□□□ -0.84
SPTLC2-206ENST00000557566 ANKRD36BQ8N2N9 1353 aa9.83□□□□□ -0.84
SPTLC2-206ENST00000557566 USP54Q70EL1 1684 aa9.83□□□□□ -0.84
SPTLC2-206ENST00000557566 POTEB3A0JP26 581 aa9.82□□□□□ -0.84
SPTLC2-206ENST00000557566 POTEBQ6S5H4 581 aa9.82□□□□□ -0.84
SPTLC2-206ENST00000557566 DDX54Q8TDD1 881 aaKnown RBP9.82□□□□□ -0.84
SPTLC2-206ENST00000557566 LTN1O94822 1766 aa9.82□□□□□ -0.84
SPTLC2-206ENST00000557566 TAF1LQ8IZX4 1826 aa9.82□□□□□ -0.84
SPTLC2-206ENST00000557566 USP47Q96K76 1375 aa9.81□□□□□ -0.84
SPTLC2-206ENST00000557566 PRIM1P49642 420 aaKnown RBP9.81□□□□□ -0.84
SPTLC2-206ENST00000557566 KIAA1210Q9ULL0 1709 aa9.81□□□□□ -0.84
SPTLC2-206ENST00000557566 TTC21BQ7Z4L5 1316 aa9.81□□□□□ -0.84
SPTLC2-206ENST00000557566 TTC21AQ8NDW8 1320 aa9.81□□□□□ -0.84
SPTLC2-206ENST00000557566 NSD2O96028 1365 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms