RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 KRT24Q2M2I5 525 aa18.63■□□□□ 0.57
ARHGEF40-208ENST00000557498 ERICH6BQ5W0A0 696 aa18.63■□□□□ 0.57
ARHGEF40-208ENST00000557498 BARGINQ6ZT62 677 aa18.63■□□□□ 0.57
ARHGEF40-208ENST00000557498 SSH1Q8WYL5 1049 aa18.63■□□□□ 0.57
ARHGEF40-208ENST00000557498 BCL2L13Q9BXK5 485 aa18.63■□□□□ 0.57
ARHGEF40-208ENST00000557498 SLC52A2Q9HAB3 445 aa18.63■□□□□ 0.57
ARHGEF40-208ENST00000557498 SMC4Q9NTJ3 1288 aa18.63■□□□□ 0.57
ARHGEF40-208ENST00000557498 USP21Q9UK80 565 aa18.63■□□□□ 0.57
ARHGEF40-208ENST00000557498 CCDC9Q9Y3X0 531 aaKnown RBP18.63■□□□□ 0.57
ARHGEF40-208ENST00000557498 BTBD11A6QL63 1104 aa18.62■□□□□ 0.57
ARHGEF40-208ENST00000557498 ELL2O00472 640 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF40-208ENST00000557498 DDX54Q8TDD1 881 aaKnown RBP18.62■□□□□ 0.57
ARHGEF40-208ENST00000557498 SOS1Q07889 1333 aaPredicted RBP18.61■□□□□ 0.57
ARHGEF40-208ENST00000557498 EXOC5O00471 708 aa18.6■□□□□ 0.57
ARHGEF40-208ENST00000557498 AFF2P51816 1311 aa18.59■□□□□ 0.57
ARHGEF40-208ENST00000557498 CANXP27824 592 aaKnown RBP18.59■□□□□ 0.57
ARHGEF40-208ENST00000557498 PAPPAQ13219 1627 aa18.59■□□□□ 0.57
ARHGEF40-208ENST00000557498 KIF16BQ96L93 1317 aa18.58■□□□□ 0.57
ARHGEF40-208ENST00000557498 ERVV-2B6SEH9 535 aa18.58■□□□□ 0.56
ARHGEF40-208ENST00000557498 KCNQ3O43525 872 aa18.58■□□□□ 0.56
ARHGEF40-208ENST00000557498 BRPF1P55201 1214 aaPredicted RBP18.58■□□□□ 0.56
ARHGEF40-208ENST00000557498 CABP4P57796 275 aa18.58■□□□□ 0.56
ARHGEF40-208ENST00000557498 EIF4A1P60842 406 aaKnown RBP18.58■□□□□ 0.56
ARHGEF40-208ENST00000557498 MRPL50Q8N5N7 158 aaKnown RBP18.58■□□□□ 0.56
ARHGEF40-208ENST00000557498 ATRNO75882 1429 aa18.57■□□□□ 0.56
ARHGEF40-208ENST00000557498 THSD7AQ9UPZ6 1657 aa18.57■□□□□ 0.56
ARHGEF40-208ENST00000557498 GLI3P10071 1580 aa18.57■□□□□ 0.56
ARHGEF40-208ENST00000557498 DDB1Q16531 1140 aa18.57■□□□□ 0.56
ARHGEF40-208ENST00000557498 C20orf194Q5TEA3 1177 aa18.57■□□□□ 0.56
ARHGEF40-208ENST00000557498 NFATC2IPQ8NCF5 419 aa18.57■□□□□ 0.56
ARHGEF40-208ENST00000557498 FRAT1Q92837 279 aaPredicted RBP18.57■□□□□ 0.56
ARHGEF40-208ENST00000557498 HOXB7P09629 217 aa18.56■□□□□ 0.56
ARHGEF40-208ENST00000557498 ZKSCAN2Q63HK3 967 aa18.56■□□□□ 0.56
ARHGEF40-208ENST00000557498 DOT1LQ8TEK3 1739 aa18.55■□□□□ 0.56
ARHGEF40-208ENST00000557498 PDE3AQ14432 1141 aa18.55■□□□□ 0.56
ARHGEF40-208ENST00000557498 CRBNQ96SW2 442 aa18.55■□□□□ 0.56
ARHGEF40-208ENST00000557498 ITGB4P16144 1822 aa18.55■□□□□ 0.56
ARHGEF40-208ENST00000557498 UBR2Q8IWV8 1755 aa18.55■□□□□ 0.56
ARHGEF40-208ENST00000557498 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
ARHGEF40-208ENST00000557498 TCERG1O14776 1098 aaKnown RBP18.54■□□□□ 0.56
ARHGEF40-208ENST00000557498 FAM98CQ17RN3 349 aaKnown RBP18.54■□□□□ 0.56
ARHGEF40-208ENST00000557498 ZNF790Q6PG37 636 aa18.54■□□□□ 0.56
ARHGEF40-208ENST00000557498 NOB1Q9ULX3 412 aaKnown RBP18.54■□□□□ 0.56
ARHGEF40-208ENST00000557498 IPO8O15397 1037 aaKnown RBP18.53■□□□□ 0.56
ARHGEF40-208ENST00000557498 SLC39A6Q13433 755 aa18.53■□□□□ 0.56
ARHGEF40-208ENST00000557498 TRPC5Q9UL62 973 aaPredicted RBP18.53■□□□□ 0.56
ARHGEF40-208ENST00000557498 C5P01031 1676 aa18.53■□□□□ 0.56
ARHGEF40-208ENST00000557498 MS4A1P11836 297 aa18.52■□□□□ 0.56
ARHGEF40-208ENST00000557498 CCDC30Q5VVM6 783 aa18.52■□□□□ 0.56
ARHGEF40-208ENST00000557498 EXOC6Q8TAG9 804 aa18.52■□□□□ 0.56
ARHGEF40-208ENST00000557498 ATF7IPQ6VMQ6 1270 aa18.51■□□□□ 0.55
ARHGEF40-208ENST00000557498 TTC5Q8N0Z6 440 aa18.51■□□□□ 0.55
ARHGEF40-208ENST00000557498 FBXO41Q8TF61 875 aa18.51■□□□□ 0.55
ARHGEF40-208ENST00000557498 GJD4Q96KN9 370 aaPredicted RBP18.51■□□□□ 0.55
ARHGEF40-208ENST00000557498 PPP4R2Q9NY27 417 aa18.51■□□□□ 0.55
ARHGEF40-208ENST00000557498 TNNQ9UQP3 1299 aa18.51■□□□□ 0.55
ARHGEF40-208ENST00000557498 CACNA1FO60840 1977 aa18.51■□□□□ 0.55
ARHGEF40-208ENST00000557498 LAMB4A4D0S4 1761 aa18.5■□□□□ 0.55
ARHGEF40-208ENST00000557498 KCPQ6ZWJ8 1503 aa18.5■□□□□ 0.55
ARHGEF40-208ENST00000557498 GIGYF1O75420 1035 aaPredicted RBP18.5■□□□□ 0.55
ARHGEF40-208ENST00000557498 TRIM27P14373 513 aa18.5■□□□□ 0.55
ARHGEF40-208ENST00000557498 HDGFL1Q5TGJ6 251 aa18.5■□□□□ 0.55
ARHGEF40-208ENST00000557498 MARCH10Q8NA82 808 aaPredicted RBP18.5■□□□□ 0.55
ARHGEF40-208ENST00000557498 PANK1Q8TE04 598 aa18.5■□□□□ 0.55
ARHGEF40-208ENST00000557498 ARHGAP45Q92619 1136 aa18.5■□□□□ 0.55
ARHGEF40-208ENST00000557498 CHMP4AQ9BY43 222 aa18.5■□□□□ 0.55
ARHGEF40-208ENST00000557498 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
ARHGEF40-208ENST00000557498 STK31Q9BXU1 1019 aa18.49■□□□□ 0.55
ARHGEF40-208ENST00000557498 RLBP1P12271 317 aa18.48■□□□□ 0.55
ARHGEF40-208ENST00000557498 FTSJ3Q8IY81 847 aaKnown RBP18.48■□□□□ 0.55
ARHGEF40-208ENST00000557498 DZIP1LQ8IYY4 767 aaKnown RBP18.48■□□□□ 0.55
ARHGEF40-208ENST00000557498 ZNF496Q96IT1 587 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF40-208ENST00000557498 FMNL2Q96PY5 1086 aa18.48■□□□□ 0.55
ARHGEF40-208ENST00000557498 BCL9O00512 1426 aa18.48■□□□□ 0.55
ARHGEF40-208ENST00000557498 CLUAP1Q96AJ1 413 aa18.47■□□□□ 0.55
ARHGEF40-208ENST00000557498 API5Q9BZZ5 524 aaKnown RBP18.47■□□□□ 0.55
ARHGEF40-208ENST00000557498 PTPRCP08575 1304 aa18.47■□□□□ 0.55
ARHGEF40-208ENST00000557498 A0A0G2JS52 829 aa18.46■□□□□ 0.55
ARHGEF40-208ENST00000557498 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
ARHGEF40-208ENST00000557498 MYT1Q01538 1121 aa18.46■□□□□ 0.55
ARHGEF40-208ENST00000557498 PIGBQ92521 554 aa18.46■□□□□ 0.55
ARHGEF40-208ENST00000557498 NECTIN2Q92692 538 aa18.46■□□□□ 0.55
ARHGEF40-208ENST00000557498 COG6Q9Y2V7 657 aa18.46■□□□□ 0.55
ARHGEF40-208ENST00000557498 RGS12O14924 1447 aa18.46■□□□□ 0.55
ARHGEF40-208ENST00000557498 SNRPA1P09661 255 aaKnown RBP18.45■□□□□ 0.54
ARHGEF40-208ENST00000557498 EIF2S2P20042 333 aaKnown RBP18.45■□□□□ 0.54
ARHGEF40-208ENST00000557498 QTRT2Q9H974 415 aaKnown RBP18.45■□□□□ 0.54
ARHGEF40-208ENST00000557498 ABCC4O15439 1325 aa18.45■□□□□ 0.54
ARHGEF40-208ENST00000557498 PRAMEF22A3QJZ6 481 aa18.44■□□□□ 0.54
ARHGEF40-208ENST00000557498 ONECUT3O60422 494 aaPredicted RBP18.44■□□□□ 0.54
ARHGEF40-208ENST00000557498 MVPQ14764 893 aaKnown RBP18.44■□□□□ 0.54
ARHGEF40-208ENST00000557498 G2E3Q7L622 706 aa18.43■□□□□ 0.54
ARHGEF40-208ENST00000557498 CHPF2Q9P2E5 772 aa18.43■□□□□ 0.54
ARHGEF40-208ENST00000557498 PRIM1P49642 420 aaKnown RBP18.42■□□□□ 0.54
ARHGEF40-208ENST00000557498 ZNF772Q68DY9 489 aaPredicted RBP18.42■□□□□ 0.54
ARHGEF40-208ENST00000557498 TMEM57Q8N5G2 664 aa18.42■□□□□ 0.54
ARHGEF40-208ENST00000557498 ATG3Q9NT62 314 aa18.42■□□□□ 0.54
ARHGEF40-208ENST00000557498 N4BP2Q86UW6 1770 aaPredicted RBP18.41■□□□□ 0.54
ARHGEF40-208ENST00000557498 FLIIQ13045 1269 aa18.41■□□□□ 0.54
ARHGEF40-208ENST00000557498 SYTL4Q96C24 671 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms