RNA–Protein interactions for RNA: ENST00000557372.1

SEL1L-206, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 3

Gene SEL1L, Length 594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-206ENST00000557372 NPC1L1Q9UHC9 1359 aa21.47■■□□□ 1.03
SEL1L-206ENST00000557372 U2SURPO15042 1029 aaKnown RBP21.46■■□□□ 1.03
SEL1L-206ENST00000557372 SMIM5Q71RC9 77 aa21.46■■□□□ 1.03
SEL1L-206ENST00000557372 KDRP35968 1356 aa21.46■■□□□ 1.03
SEL1L-206ENST00000557372 LINC00116Q8NCU8 138 aa21.45■■□□□ 1.02
SEL1L-206ENST00000557372 FLAD1Q8NFF5 587 aa21.45■■□□□ 1.02
SEL1L-206ENST00000557372 KDM6AO15550 1401 aaPredicted RBP21.45■■□□□ 1.02
SEL1L-206ENST00000557372 C4BP0C0L5 1744 aa21.44■■□□□ 1.02
SEL1L-206ENST00000557372 ITPK1Q13572 414 aa21.44■■□□□ 1.02
SEL1L-206ENST00000557372 NFATC2IPQ8NCF5 419 aa21.43■■□□□ 1.02
SEL1L-206ENST00000557372 AKAP4Q5JQC9 854 aa21.42■■□□□ 1.02
SEL1L-206ENST00000557372 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.41■■□□□ 1.02
SEL1L-206ENST00000557372 GNPATO15228 680 aa21.41■■□□□ 1.02
SEL1L-206ENST00000557372 AMIGO3Q86WK7 504 aa21.41■■□□□ 1.02
SEL1L-206ENST00000557372 PTCD1O75127 700 aaKnown RBP21.4■■□□□ 1.02
SEL1L-206ENST00000557372 CFAP53Q96M91 514 aa21.4■■□□□ 1.02
SEL1L-206ENST00000557372 MTHFSDQ2M296 383 aaKnown RBP21.39■■□□□ 1.01
SEL1L-206ENST00000557372 LGR6Q9HBX8 967 aa21.39■■□□□ 1.01
SEL1L-206ENST00000557372 YY1P25490 414 aa21.38■■□□□ 1.01
SEL1L-206ENST00000557372 SSFA2P28290 1259 aa21.37■■□□□ 1.01
SEL1L-206ENST00000557372 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
SEL1L-206ENST00000557372 SLC4A9Q96Q91 983 aa21.37■■□□□ 1.01
SEL1L-206ENST00000557372 UBR3Q6ZT12 1888 aa21.37■■□□□ 1.01
SEL1L-206ENST00000557372 RNMTO43148 476 aaKnown RBP21.36■■□□□ 1.01
SEL1L-206ENST00000557372 COL3A1P02461 1466 aaPredicted RBP21.36■■□□□ 1.01
SEL1L-206ENST00000557372 PPP2R1AP30153 589 aa21.35■■□□□ 1.01
SEL1L-206ENST00000557372 GPR162Q16538 588 aa21.35■■□□□ 1.01
SEL1L-206ENST00000557372 RTCBQ9Y3I0 505 aaKnown RBP21.35■■□□□ 1.01
SEL1L-206ENST00000557372 SCN11AQ9UI33 1791 aa21.35■■□□□ 1.01
SEL1L-206ENST00000557372 COL24A1Q17RW2 1714 aa21.35■■□□□ 1.01
SEL1L-206ENST00000557372 NLGN2Q8NFZ4 835 aa21.34■■□□□ 1.01
SEL1L-206ENST00000557372 SLC52A2Q9HAB3 445 aa21.34■■□□□ 1.01
SEL1L-206ENST00000557372 MAP3K5Q99683 1374 aa21.34■■□□□ 1.01
SEL1L-206ENST00000557372 NUDCQ9Y266 331 aa21.33■■□□□ 1.01
SEL1L-206ENST00000557372 SLC39A6Q13433 755 aa21.32■■□□□ 1
SEL1L-206ENST00000557372 TRAPPC3LQ5T215 181 aa21.32■■□□□ 1
SEL1L-206ENST00000557372 U2AF1L5P0DN76 240 aaPredicted RBP21.3■■□□□ 1
SEL1L-206ENST00000557372 U2AF1Q01081 240 aaKnown RBP eCLIP21.3■■□□□ 1
SEL1L-206ENST00000557372 RC3H1Q5TC82 1133 aaKnown RBP21.3■■□□□ 1
SEL1L-206ENST00000557372 GAS2L2Q8NHY3 880 aa21.3■■□□□ 1
SEL1L-206ENST00000557372 VIRMAQ69YN4 1812 aaKnown RBP21.29■■□□□ 1
SEL1L-206ENST00000557372 PRKAR2BP31323 418 aa21.29■■□□□ 1
SEL1L-206ENST00000557372 CNTNAP4Q9C0A0 1308 aa21.29■■□□□ 1
SEL1L-206ENST00000557372 GNAT3A8MTJ3 354 aa21.28■■□□□ 1
SEL1L-206ENST00000557372 RPS6KA4O75676 772 aa21.28■■□□□ 1
SEL1L-206ENST00000557372 RFC4P35249 363 aa21.28■■□□□ 1
SEL1L-206ENST00000557372 CRKLP46109 303 aaKnown RBP21.28■■□□□ 1
SEL1L-206ENST00000557372 ARHGEF1Q92888 912 aaKnown RBP21.28■■□□□ 1
SEL1L-206ENST00000557372 ZNF831Q5JPB2 1677 aa21.27■■□□□ 1
SEL1L-206ENST00000557372 TEFQ10587 303 aa21.26■□□□□ 0.99
SEL1L-206ENST00000557372 DNAJC10Q8IXB1 793 aa21.26■□□□□ 0.99
SEL1L-206ENST00000557372 PHACTR3Q96KR7 559 aa21.26■□□□□ 0.99
SEL1L-206ENST00000557372 RSPH6AQ9H0K4 717 aa21.26■□□□□ 0.99
SEL1L-206ENST00000557372 COL5A3P25940 1745 aaPredicted RBP21.26■□□□□ 0.99
SEL1L-206ENST00000557372 CD2APQ9Y5K6 639 aa21.25■□□□□ 0.99
SEL1L-206ENST00000557372 MMP10P09238 476 aa21.24■□□□□ 0.99
SEL1L-206ENST00000557372 ADRA2BP18089 450 aa21.24■□□□□ 0.99
SEL1L-206ENST00000557372 TTC5Q8N0Z6 440 aa21.24■□□□□ 0.99
SEL1L-206ENST00000557372 IL17REQ8NFR9 667 aa21.24■□□□□ 0.99
SEL1L-206ENST00000557372 MYH14Q7Z406 1995 aaKnown RBP21.24■□□□□ 0.99
SEL1L-206ENST00000557372 MRC1P22897 1456 aa21.24■□□□□ 0.99
SEL1L-206ENST00000557372 TJP1Q07157 1748 aa21.22■□□□□ 0.99
SEL1L-206ENST00000557372 DDX10Q13206 875 aaKnown RBP21.22■□□□□ 0.99
SEL1L-206ENST00000557372 NLGN1Q8N2Q7 840 aa21.22■□□□□ 0.99
SEL1L-206ENST00000557372 WWC3Q9ULE0 1092 aa21.22■□□□□ 0.99
SEL1L-206ENST00000557372 INTS5Q6P9B9 1019 aaKnown RBP21.21■□□□□ 0.99
SEL1L-206ENST00000557372 CCDC87Q9NVE4 849 aa21.21■□□□□ 0.99
SEL1L-206ENST00000557372 FCHSD2O94868 740 aa21.2■□□□□ 0.98
SEL1L-206ENST00000557372 GYS1P13807 737 aa21.2■□□□□ 0.98
SEL1L-206ENST00000557372 RTF1Q92541 710 aaKnown RBP21.2■□□□□ 0.98
SEL1L-206ENST00000557372 SRP68Q9UHB9 627 aaKnown RBP21.2■□□□□ 0.98
SEL1L-206ENST00000557372 ADAMTS7Q9UKP4 1686 aa21.19■□□□□ 0.98
SEL1L-206ENST00000557372 YBX3P16989 372 aaKnown RBP eCLIP21.19■□□□□ 0.98
SEL1L-206ENST00000557372 NEFMP07197 916 aa21.18■□□□□ 0.98
SEL1L-206ENST00000557372 CYP19A1P11511 503 aaPredicted RBP21.18■□□□□ 0.98
SEL1L-206ENST00000557372 PARP3Q9Y6F1 533 aa21.18■□□□□ 0.98
SEL1L-206ENST00000557372 KCPQ6ZWJ8 1503 aa21.18■□□□□ 0.98
SEL1L-206ENST00000557372 CHD4Q14839 1912 aa21.17■□□□□ 0.98
SEL1L-206ENST00000557372 ZNF790Q6PG37 636 aa21.17■□□□□ 0.98
SEL1L-206ENST00000557372 C4AP0C0L4 1744 aa21.16■□□□□ 0.98
SEL1L-206ENST00000557372 BTBD11A6QL63 1104 aa21.16■□□□□ 0.98
SEL1L-206ENST00000557372 GRIN3BO60391 1043 aa21.16■□□□□ 0.98
SEL1L-206ENST00000557372 ZPR1O75312 459 aa21.16■□□□□ 0.98
SEL1L-206ENST00000557372 CANXP27824 592 aaKnown RBP21.16■□□□□ 0.98
SEL1L-206ENST00000557372 MCM10Q7L590 875 aa21.16■□□□□ 0.98
SEL1L-206ENST00000557372 VSIG10Q8N0Z9 540 aa21.16■□□□□ 0.98
SEL1L-206ENST00000557372 ZNF496Q96IT1 587 aaPredicted RBP21.16■□□□□ 0.98
SEL1L-206ENST00000557372 USP42Q9H9J4 1324 aaKnown RBP21.15■□□□□ 0.98
SEL1L-206ENST00000557372 ZBTB1Q9Y2K1 713 aa21.15■□□□□ 0.98
SEL1L-206ENST00000557372 CICQ96RK0 1608 aaPredicted RBP21.15■□□□□ 0.98
SEL1L-206ENST00000557372 SOS1Q07889 1333 aaPredicted RBP21.14■□□□□ 0.97
SEL1L-206ENST00000557372 UTRNP46939 3433 aa21.14■□□□□ 0.97
SEL1L-206ENST00000557372 STARD3NLO95772 234 aa21.14■□□□□ 0.97
SEL1L-206ENST00000557372 DCTN1Q14203 1278 aa21.14■□□□□ 0.97
SEL1L-206ENST00000557372 FKBP8Q14318 412 aa21.14■□□□□ 0.97
SEL1L-206ENST00000557372 KCNQ3O43525 872 aa21.13■□□□□ 0.97
SEL1L-206ENST00000557372 USPL1Q5W0Q7 1092 aa21.13■□□□□ 0.97
SEL1L-206ENST00000557372 FMNL2Q96PY5 1086 aa21.13■□□□□ 0.97
SEL1L-206ENST00000557372 ZNF330Q9Y3S2 320 aaPredicted RBP21.13■□□□□ 0.97
SEL1L-206ENST00000557372 CEMIPQ8WUJ3 1361 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms