RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 ASAP1Q9ULH1 1129 aa14□□□□□ -0.17
RDH11-209ENST00000557273 CEP350Q5VT06 3117 aa14□□□□□ -0.17
RDH11-209ENST00000557273 BRCA1P38398 1863 aaKnown RBP13.99□□□□□ -0.17
RDH11-209ENST00000557273 GPBP1L1Q9HC44 474 aaPredicted RBP13.99□□□□□ -0.17
RDH11-209ENST00000557273 ATG3Q9NT62 314 aa13.99□□□□□ -0.17
RDH11-209ENST00000557273 GNPATO15228 680 aa13.98□□□□□ -0.17
RDH11-209ENST00000557273 ATP6V1AP38606 617 aa13.98□□□□□ -0.17
RDH11-209ENST00000557273 EIF4A2Q14240 407 aaKnown RBP13.98□□□□□ -0.17
RDH11-209ENST00000557273 MYH14Q7Z406 1995 aaKnown RBP13.98□□□□□ -0.17
RDH11-209ENST00000557273 ERVV-2B6SEH9 535 aa13.97□□□□□ -0.17
RDH11-209ENST00000557273 HSP90AB1P08238 724 aaKnown RBP13.97□□□□□ -0.17
RDH11-209ENST00000557273 PXDNLA1KZ92 1463 aa13.97□□□□□ -0.17
RDH11-209ENST00000557273 C10orf71Q711Q0 1435 aa13.97□□□□□ -0.17
RDH11-209ENST00000557273 C4AP0C0L4 1744 aa13.96□□□□□ -0.17
RDH11-209ENST00000557273 RC3H1Q5TC82 1133 aaKnown RBP13.96□□□□□ -0.17
RDH11-209ENST00000557273 SMIM5Q71RC9 77 aa13.96□□□□□ -0.17
RDH11-209ENST00000557273 DCAF5Q96JK2 942 aa13.96□□□□□ -0.17
RDH11-209ENST00000557273 N4BP2Q86UW6 1770 aaPredicted RBP13.96□□□□□ -0.18
RDH11-209ENST00000557273 CNTNAP4Q9C0A0 1308 aa13.95□□□□□ -0.18
RDH11-209ENST00000557273 MMP10P09238 476 aa13.95□□□□□ -0.18
RDH11-209ENST00000557273 TGFB2P61812 414 aa13.95□□□□□ -0.18
RDH11-209ENST00000557273 KDM6AO15550 1401 aaPredicted RBP13.95□□□□□ -0.18
RDH11-209ENST00000557273 ARFGEF1Q9Y6D6 1849 aa13.94□□□□□ -0.18
RDH11-209ENST00000557273 HSPA6P17066 643 aa13.94□□□□□ -0.18
RDH11-209ENST00000557273 NLGN1Q8N2Q7 840 aa13.94□□□□□ -0.18
RDH11-209ENST00000557273 SLC4A9Q96Q91 983 aa13.94□□□□□ -0.18
RDH11-209ENST00000557273 RTCBQ9Y3I0 505 aaKnown RBP13.94□□□□□ -0.18
RDH11-209ENST00000557273 AMOTQ4VCS5 1084 aa13.93□□□□□ -0.18
RDH11-209ENST00000557273 TRAPPC3LQ5T215 181 aa13.93□□□□□ -0.18
RDH11-209ENST00000557273 SCN11AQ9UI33 1791 aa13.93□□□□□ -0.18
RDH11-209ENST00000557273 KIF3CO14782 793 aa13.92□□□□□ -0.18
RDH11-209ENST00000557273 PLEKHO1Q53GL0 409 aaPredicted RBP13.92□□□□□ -0.18
RDH11-209ENST00000557273 TJP1Q07157 1748 aa13.91□□□□□ -0.18
RDH11-209ENST00000557273 RPS6KA4O75676 772 aa13.91□□□□□ -0.18
RDH11-209ENST00000557273 GYS1P13807 737 aa13.91□□□□□ -0.18
RDH11-209ENST00000557273 ARHGEF1Q92888 912 aaKnown RBP13.91□□□□□ -0.18
RDH11-209ENST00000557273 ADAMTS7Q9UKP4 1686 aa13.91□□□□□ -0.18
RDH11-209ENST00000557273 TNNT2P45379 298 aaPredicted RBP13.9□□□□□ -0.18
RDH11-209ENST00000557273 IFFO2Q5TF58 517 aa13.9□□□□□ -0.18
RDH11-209ENST00000557273 ZNF530Q6P9A1 599 aaPredicted RBP13.9□□□□□ -0.18
RDH11-209ENST00000557273 EIF4G2P78344 907 aaKnown RBP eCLIP13.89□□□□□ -0.19
RDH11-209ENST00000557273 ZNF526Q8TF50 670 aaPredicted RBP13.89□□□□□ -0.19
RDH11-209ENST00000557273 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
RDH11-209ENST00000557273 CCDC87Q9NVE4 849 aa13.89□□□□□ -0.19
RDH11-209ENST00000557273 WWC3Q9ULE0 1092 aa13.89□□□□□ -0.19
RDH11-209ENST00000557273 VIRMAQ69YN4 1812 aaKnown RBP13.88□□□□□ -0.19
RDH11-209ENST00000557273 RFC4P35249 363 aa13.88□□□□□ -0.19
RDH11-209ENST00000557273 CABP4P57796 275 aa13.88□□□□□ -0.19
RDH11-209ENST00000557273 PANK3Q9H999 370 aa13.88□□□□□ -0.19
RDH11-209ENST00000557273 MRC1P22897 1456 aa13.87□□□□□ -0.19
RDH11-209ENST00000557273 MTHFSP49914 203 aa13.87□□□□□ -0.19
RDH11-209ENST00000557273 USP42Q9H9J4 1324 aaKnown RBP13.87□□□□□ -0.19
RDH11-209ENST00000557273 A0A0G2JLW4 131 aa13.86□□□□□ -0.19
RDH11-209ENST00000557273 C1orf141Q5JVX7 400 aa13.86□□□□□ -0.19
RDH11-209ENST00000557273 AEBP1Q8IUX7 1158 aa13.86□□□□□ -0.19
RDH11-209ENST00000557273 POLR3GLQ9BT43 218 aa13.86□□□□□ -0.19
RDH11-209ENST00000557273 BCS1LQ9Y276 419 aa13.86□□□□□ -0.19
RDH11-209ENST00000557273 PARP3Q9Y6F1 533 aa13.86□□□□□ -0.19
RDH11-209ENST00000557273 SBF1O95248 1867 aa13.85□□□□□ -0.19
RDH11-209ENST00000557273 TOMM70O94826 608 aa13.85□□□□□ -0.19
RDH11-209ENST00000557273 HSPA5P11021 654 aaKnown RBP13.85□□□□□ -0.19
RDH11-209ENST00000557273 DPEP1P16444 411 aa13.85□□□□□ -0.19
RDH11-209ENST00000557273 KCNA3P22001 575 aa13.85□□□□□ -0.19
RDH11-209ENST00000557273 CRKLP46109 303 aaKnown RBP13.85□□□□□ -0.19
RDH11-209ENST00000557273 IL13P35225 146 aa13.84□□□□□ -0.19
RDH11-209ENST00000557273 MORC1Q86VD1 984 aa13.84□□□□□ -0.19
RDH11-209ENST00000557273 PIAS4Q8N2W9 510 aaPredicted RBP13.84□□□□□ -0.19
RDH11-209ENST00000557273 NFATC2IPQ8NCF5 419 aa13.84□□□□□ -0.19
RDH11-209ENST00000557273 NRXN2Q9P2S2 1712 aa13.84□□□□□ -0.19
RDH11-209ENST00000557273 PTCD1O75127 700 aaKnown RBP13.83□□□□□ -0.2
RDH11-209ENST00000557273 FCHSD2O94868 740 aa13.83□□□□□ -0.2
RDH11-209ENST00000557273 APLP1P51693 650 aa13.83□□□□□ -0.2
RDH11-209ENST00000557273 SULT6B1Q6IMI4 303 aa13.83□□□□□ -0.2
RDH11-209ENST00000557273 DLEC1Q9Y238 1755 aa13.83□□□□□ -0.2
RDH11-209ENST00000557273 UBR2Q8IWV8 1755 aa13.82□□□□□ -0.2
RDH11-209ENST00000557273 DDR1Q08345 913 aa13.82□□□□□ -0.2
RDH11-209ENST00000557273 FKBP8Q14318 412 aa13.82□□□□□ -0.2
RDH11-209ENST00000557273 AKAP4Q5JQC9 854 aa13.82□□□□□ -0.2
RDH11-209ENST00000557273 INTS5Q6P9B9 1019 aaKnown RBP13.82□□□□□ -0.2
RDH11-209ENST00000557273 ARHGAP27Q6ZUM4 889 aa13.82□□□□□ -0.2
RDH11-209ENST00000557273 PIM2Q9P1W9 311 aa13.82□□□□□ -0.2
RDH11-209ENST00000557273 AFDNP55196 1824 aaKnown RBP13.82□□□□□ -0.2
RDH11-209ENST00000557273 TNRC6CQ9HCJ0 1690 aaKnown RBP13.82□□□□□ -0.2
RDH11-209ENST00000557273 KCPQ6ZWJ8 1503 aa13.81□□□□□ -0.2
RDH11-209ENST00000557273 TM4SF1P30408 202 aa13.81□□□□□ -0.2
RDH11-209ENST00000557273 SLC52A2Q9HAB3 445 aa13.81□□□□□ -0.2
RDH11-209ENST00000557273 SRP68Q9UHB9 627 aaKnown RBP13.81□□□□□ -0.2
RDH11-209ENST00000557273 KNSTRNQ9Y448 316 aa13.81□□□□□ -0.2
RDH11-209ENST00000557273 WDR90Q96KV7 1748 aa13.81□□□□□ -0.2
RDH11-209ENST00000557273 POLRMTO00411 1230 aaKnown RBP13.8□□□□□ -0.2
RDH11-209ENST00000557273 AMER1Q5JTC6 1135 aaPredicted RBP13.8□□□□□ -0.2
RDH11-209ENST00000557273 RBM46Q8TBY0 533 aaKnown RBP13.8□□□□□ -0.2
RDH11-209ENST00000557273 SOS1Q07889 1333 aaPredicted RBP13.8□□□□□ -0.2
RDH11-209ENST00000557273 DALRD3Q5D0E6 543 aaKnown RBP13.79□□□□□ -0.2
RDH11-209ENST00000557273 C9orf131Q5VYM1 1079 aa13.79□□□□□ -0.2
RDH11-209ENST00000557273 NMRK2Q9NPI5 230 aa13.79□□□□□ -0.2
RDH11-209ENST00000557273 CYP19A1P11511 503 aaPredicted RBP13.78□□□□□ -0.2
RDH11-209ENST00000557273 DNAJC10Q8IXB1 793 aa13.78□□□□□ -0.2
RDH11-209ENST00000557273 DNAJC5GQ8N7S2 189 aa13.78□□□□□ -0.2
RDH11-209ENST00000557273 ZC3H4Q9UPT8 1303 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms