RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SSFA2P28290 1259 aa21.68■■□□□ 1.06
TUBB3-213ENST00000557262 ITPK1Q13572 414 aa21.68■■□□□ 1.06
TUBB3-213ENST00000557262 SMIM5Q71RC9 77 aa21.68■■□□□ 1.06
TUBB3-213ENST00000557262 CD2APQ9Y5K6 639 aa21.68■■□□□ 1.06
TUBB3-213ENST00000557262 ZNF530Q6P9A1 599 aaPredicted RBP21.67■■□□□ 1.06
TUBB3-213ENST00000557262 AMER1Q5JTC6 1135 aaPredicted RBP21.66■■□□□ 1.06
TUBB3-213ENST00000557262 KIF7Q2M1P5 1343 aa21.65■■□□□ 1.06
TUBB3-213ENST00000557262 GRIN3BO60391 1043 aa21.65■■□□□ 1.06
TUBB3-213ENST00000557262 IL13P35225 146 aa21.65■■□□□ 1.06
TUBB3-213ENST00000557262 CABP4P57796 275 aa21.65■■□□□ 1.06
TUBB3-213ENST00000557262 SULT6B1Q6IMI4 303 aa21.65■■□□□ 1.06
TUBB3-213ENST00000557262 AEBP1Q8IUX7 1158 aa21.65■■□□□ 1.06
TUBB3-213ENST00000557262 GNPATO15228 680 aa21.64■■□□□ 1.05
TUBB3-213ENST00000557262 MTHFSP49914 203 aa21.64■■□□□ 1.05
TUBB3-213ENST00000557262 RBM42Q9BTD8 480 aaKnown RBP21.64■■□□□ 1.05
TUBB3-213ENST00000557262 YBX3P16989 372 aaKnown RBP eCLIP21.63■■□□□ 1.05
TUBB3-213ENST00000557262 C1orf141Q5JVX7 400 aa21.63■■□□□ 1.05
TUBB3-213ENST00000557262 UBR3Q6ZT12 1888 aa21.62■■□□□ 1.05
TUBB3-213ENST00000557262 SLC4A9Q96Q91 983 aa21.62■■□□□ 1.05
TUBB3-213ENST00000557262 PER1O15534 1290 aaPredicted RBP21.61■■□□□ 1.05
TUBB3-213ENST00000557262 TRAPPC3LQ5T215 181 aa21.6■■□□□ 1.05
TUBB3-213ENST00000557262 RC3H1Q5TC82 1133 aaKnown RBP21.6■■□□□ 1.05
TUBB3-213ENST00000557262 RTCBQ9Y3I0 505 aaKnown RBP21.6■■□□□ 1.05
TUBB3-213ENST00000557262 KDRP35968 1356 aa21.6■■□□□ 1.05
TUBB3-213ENST00000557262 KDM6AO15550 1401 aaPredicted RBP21.59■■□□□ 1.05
TUBB3-213ENST00000557262 NFATC2IPQ8NCF5 419 aa21.59■■□□□ 1.05
TUBB3-213ENST00000557262 RPS6KA4O75676 772 aa21.56■■□□□ 1.04
TUBB3-213ENST00000557262 PTCD1O75127 700 aaKnown RBP21.55■■□□□ 1.04
TUBB3-213ENST00000557262 ADRA2BP18089 450 aa21.55■■□□□ 1.04
TUBB3-213ENST00000557262 AKAP4Q5JQC9 854 aa21.55■■□□□ 1.04
TUBB3-213ENST00000557262 CC2D1BQ5T0F9 858 aaKnown RBP21.55■■□□□ 1.04
TUBB3-213ENST00000557262 NLGN1Q8N2Q7 840 aa21.55■■□□□ 1.04
TUBB3-213ENST00000557262 ARHGEF1Q92888 912 aaKnown RBP21.55■■□□□ 1.04
TUBB3-213ENST00000557262 CNTNAP4Q9C0A0 1308 aa21.55■■□□□ 1.04
TUBB3-213ENST00000557262 ZNF831Q5JPB2 1677 aa21.53■■□□□ 1.04
TUBB3-213ENST00000557262 MMP10P09238 476 aa21.53■■□□□ 1.04
TUBB3-213ENST00000557262 DIAPH1O60610 1272 aaKnown RBP21.52■■□□□ 1.04
TUBB3-213ENST00000557262 HMOX1P09601 288 aa21.52■■□□□ 1.04
TUBB3-213ENST00000557262 RFC4P35249 363 aa21.52■■□□□ 1.04
TUBB3-213ENST00000557262 LGR6Q9HBX8 967 aa21.51■■□□□ 1.03
TUBB3-213ENST00000557262 C1QTNF8P60827 252 aa21.5■■□□□ 1.03
TUBB3-213ENST00000557262 GYS1P13807 737 aa21.49■■□□□ 1.03
TUBB3-213ENST00000557262 CRKLP46109 303 aaKnown RBP21.49■■□□□ 1.03
TUBB3-213ENST00000557262 SLC52A2Q9HAB3 445 aa21.49■■□□□ 1.03
TUBB3-213ENST00000557262 RNMTO43148 476 aaKnown RBP21.48■■□□□ 1.03
TUBB3-213ENST00000557262 NPC1L1Q9UHC9 1359 aa21.48■■□□□ 1.03
TUBB3-213ENST00000557262 TGFB2P61812 414 aa21.47■■□□□ 1.03
TUBB3-213ENST00000557262 MTHFSDQ2M296 383 aaKnown RBP21.47■■□□□ 1.03
TUBB3-213ENST00000557262 WWC3Q9ULE0 1092 aa21.47■■□□□ 1.03
TUBB3-213ENST00000557262 GIGYF1O75420 1035 aaPredicted RBP21.46■■□□□ 1.03
TUBB3-213ENST00000557262 PARP3Q9Y6F1 533 aa21.46■■□□□ 1.03
TUBB3-213ENST00000557262 COL5A3P25940 1745 aaPredicted RBP21.46■■□□□ 1.03
TUBB3-213ENST00000557262 CNGB1Q14028 1251 aaPredicted RBP21.45■■□□□ 1.02
TUBB3-213ENST00000557262 CCDC87Q9NVE4 849 aa21.45■■□□□ 1.02
TUBB3-213ENST00000557262 SCN11AQ9UI33 1791 aa21.45■■□□□ 1.02
TUBB3-213ENST00000557262 INTS5Q6P9B9 1019 aaKnown RBP21.44■■□□□ 1.02
TUBB3-213ENST00000557262 MYH14Q7Z406 1995 aaKnown RBP21.44■■□□□ 1.02
TUBB3-213ENST00000557262 DNAJC10Q8IXB1 793 aa21.43■■□□□ 1.02
TUBB3-213ENST00000557262 A0A0G2JLW4 131 aa21.42■■□□□ 1.02
TUBB3-213ENST00000557262 SLC39A6Q13433 755 aa21.42■■□□□ 1.02
TUBB3-213ENST00000557262 SENP3-EIF4A1A0A087X0R7 540 aa21.41■■□□□ 1.02
TUBB3-213ENST00000557262 U2SURPO15042 1029 aaKnown RBP21.41■■□□□ 1.02
TUBB3-213ENST00000557262 SRP68Q9UHB9 627 aaKnown RBP21.41■■□□□ 1.02
TUBB3-213ENST00000557262 ATP10DQ9P241 1426 aa21.4■■□□□ 1.02
TUBB3-213ENST00000557262 USP42Q9H9J4 1324 aaKnown RBP21.4■■□□□ 1.02
TUBB3-213ENST00000557262 CICQ96RK0 1608 aaPredicted RBP21.4■■□□□ 1.02
TUBB3-213ENST00000557262 CYP19A1P11511 503 aaPredicted RBP21.39■■□□□ 1.01
TUBB3-213ENST00000557262 FKBP8Q14318 412 aa21.39■■□□□ 1.01
TUBB3-213ENST00000557262 PXDNLA1KZ92 1463 aa21.39■■□□□ 1.01
TUBB3-213ENST00000557262 C10orf71Q711Q0 1435 aa21.38■■□□□ 1.01
TUBB3-213ENST00000557262 DPEP1P16444 411 aa21.38■■□□□ 1.01
TUBB3-213ENST00000557262 VSIG10Q8N0Z9 540 aa21.38■■□□□ 1.01
TUBB3-213ENST00000557262 GPBP1L1Q9HC44 474 aaPredicted RBP21.38■■□□□ 1.01
TUBB3-213ENST00000557262 BCS1LQ9Y276 419 aa21.38■■□□□ 1.01
TUBB3-213ENST00000557262 KIF13BQ9NQT8 1826 aa21.37■■□□□ 1.01
TUBB3-213ENST00000557262 ZPR1O75312 459 aa21.37■■□□□ 1.01
TUBB3-213ENST00000557262 GAS2L2Q8NHY3 880 aa21.37■■□□□ 1.01
TUBB3-213ENST00000557262 TJP1Q07157 1748 aa21.37■■□□□ 1.01
TUBB3-213ENST00000557262 MRC1P22897 1456 aa21.37■■□□□ 1.01
TUBB3-213ENST00000557262 ADCY9O60503 1353 aa21.36■■□□□ 1.01
TUBB3-213ENST00000557262 C4AP0C0L4 1744 aa21.36■■□□□ 1.01
TUBB3-213ENST00000557262 GNAT3A8MTJ3 354 aa21.36■■□□□ 1.01
TUBB3-213ENST00000557262 TM4SF1P30408 202 aa21.36■■□□□ 1.01
TUBB3-213ENST00000557262 COL3A1P02461 1466 aaPredicted RBP21.36■■□□□ 1.01
TUBB3-213ENST00000557262 SOS1Q07889 1333 aaPredicted RBP21.35■■□□□ 1.01
TUBB3-213ENST00000557262 IL17REQ8NFR9 667 aa21.35■■□□□ 1.01
TUBB3-213ENST00000557262 CFAP53Q96M91 514 aa21.35■■□□□ 1.01
TUBB3-213ENST00000557262 FCHSD2O94868 740 aa21.34■■□□□ 1.01
TUBB3-213ENST00000557262 KCNA3P22001 575 aa21.34■■□□□ 1.01
TUBB3-213ENST00000557262 DDR1Q08345 913 aa21.34■■□□□ 1.01
TUBB3-213ENST00000557262 TEFQ10587 303 aa21.34■■□□□ 1.01
TUBB3-213ENST00000557262 USPL1Q5W0Q7 1092 aa21.34■■□□□ 1.01
TUBB3-213ENST00000557262 TTC5Q8N0Z6 440 aa21.34■■□□□ 1.01
TUBB3-213ENST00000557262 KIAA1551Q9HCM1 1747 aa21.34■■□□□ 1.01
TUBB3-213ENST00000557262 N4BP2Q86UW6 1770 aaPredicted RBP21.33■■□□□ 1.01
TUBB3-213ENST00000557262 ARHGAP27Q6ZUM4 889 aa21.33■■□□□ 1.01
TUBB3-213ENST00000557262 ZNF526Q8TF50 670 aaPredicted RBP21.33■■□□□ 1.01
TUBB3-213ENST00000557262 PIM2Q9P1W9 311 aa21.33■■□□□ 1.01
TUBB3-213ENST00000557262 NARFQ9UHQ1 456 aa21.33■■□□□ 1.01
TUBB3-213ENST00000557262 ADAMTS7Q9UKP4 1686 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms