RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 SAMD9LQ8IVG5 1584 aa8.76□□□□□ -1.01
FOXN3-215ENST00000557261 DAPK1P53355 1430 aa8.75□□□□□ -1.01
FOXN3-215ENST00000557261 F12P00748 615 aaPredicted RBP8.75□□□□□ -1.01
FOXN3-215ENST00000557261 CLDN10P78369 228 aa8.75□□□□□ -1.01
FOXN3-215ENST00000557261 SIRT1Q96EB6 747 aa8.75□□□□□ -1.01
FOXN3-215ENST00000557261 CEP126Q9P2H0 1117 aa8.75□□□□□ -1.01
FOXN3-215ENST00000557261 CLSPNQ9HAW4 1339 aa8.75□□□□□ -1.01
FOXN3-215ENST00000557261 KIAA1107Q9UPP5 1409 aa8.74□□□□□ -1.01
FOXN3-215ENST00000557261 ZEB1P37275 1124 aaPredicted RBP8.74□□□□□ -1.01
FOXN3-215ENST00000557261 ZNF211Q13398 564 aaPredicted RBP8.74□□□□□ -1.01
FOXN3-215ENST00000557261 PHTF2Q8N3S3 785 aa8.74□□□□□ -1.01
FOXN3-215ENST00000557261 CDCA7Q9BWT1 371 aaPredicted RBP8.74□□□□□ -1.01
FOXN3-215ENST00000557261 ABCC1P33527 1531 aa8.74□□□□□ -1.01
FOXN3-215ENST00000557261 PLXNC1O60486 1568 aa8.73□□□□□ -1.01
FOXN3-215ENST00000557261 GLI2P10070 1586 aa8.73□□□□□ -1.01
FOXN3-215ENST00000557261 SETD5Q9C0A6 1442 aa8.73□□□□□ -1.01
FOXN3-215ENST00000557261 PRMT3O60678 531 aa8.73□□□□□ -1.01
FOXN3-215ENST00000557261 DESI1Q6ICB0 168 aa8.73□□□□□ -1.01
FOXN3-215ENST00000557261 PLPP7Q8NBV4 271 aa8.73□□□□□ -1.01
FOXN3-215ENST00000557261 PRIMPOLQ96LW4 560 aa8.73□□□□□ -1.01
FOXN3-215ENST00000557261 KIAA1024Q9UPX6 916 aa8.73□□□□□ -1.01
FOXN3-215ENST00000557261 PLCH2O75038 1416 aa8.72□□□□□ -1.01
FOXN3-215ENST00000557261 ASXL2Q76L83 1435 aa8.72□□□□□ -1.01
FOXN3-215ENST00000557261 ARHGAP5Q13017 1502 aa8.72□□□□□ -1.01
FOXN3-215ENST00000557261 RNF135Q8IUD6 432 aa8.72□□□□□ -1.01
FOXN3-215ENST00000557261 OGFOD1Q8N543 542 aa8.72□□□□□ -1.01
FOXN3-215ENST00000557261 IRX2Q9BZI1 471 aaPredicted RBP8.72□□□□□ -1.01
FOXN3-215ENST00000557261 ABCC5O15440 1437 aa8.71□□□□□ -1.01
FOXN3-215ENST00000557261 NAIPQ13075 1403 aa8.71□□□□□ -1.01
FOXN3-215ENST00000557261 PTPRKQ15262 1439 aa8.71□□□□□ -1.01
FOXN3-215ENST00000557261 CCDC141Q6ZP82 1450 aa8.71□□□□□ -1.01
FOXN3-215ENST00000557261 DKK1O94907 266 aa8.71□□□□□ -1.02
FOXN3-215ENST00000557261 TCF3P15923 654 aa8.71□□□□□ -1.02
FOXN3-215ENST00000557261 HDGFP51858 240 aaKnown RBP8.71□□□□□ -1.02
FOXN3-215ENST00000557261 FAM177A1Q8N128 213 aaPredicted RBP8.71□□□□□ -1.02
FOXN3-215ENST00000557261 PCDHB9Q9Y5E1 797 aa8.71□□□□□ -1.02
FOXN3-215ENST00000557261 MAP3K4Q9Y6R4 1608 aa8.71□□□□□ -1.02
FOXN3-215ENST00000557261 MBD5Q9P267 1494 aa8.7□□□□□ -1.02
FOXN3-215ENST00000557261 ABL1P00519 1130 aa8.7□□□□□ -1.02
FOXN3-215ENST00000557261 FAM50AQ14320 339 aaKnown RBP8.7□□□□□ -1.02
FOXN3-215ENST00000557261 SLFNL1Q499Z3 407 aa8.7□□□□□ -1.02
FOXN3-215ENST00000557261 TJAP1Q5JTD0 557 aa8.7□□□□□ -1.02
FOXN3-215ENST00000557261 GAS2L2Q8NHY3 880 aa8.7□□□□□ -1.02
FOXN3-215ENST00000557261 MTRQ99707 1265 aa8.7□□□□□ -1.02
FOXN3-215ENST00000557261 CFDP1Q9UEE9 299 aaPredicted RBP8.7□□□□□ -1.02
FOXN3-215ENST00000557261 RAB3GAP2Q9H2M9 1393 aa8.7□□□□□ -1.02
FOXN3-215ENST00000557261 SYCP2Q9BX26 1530 aa8.7□□□□□ -1.02
FOXN3-215ENST00000557261 ATP5J2-PTCD1G3V325 749 aa8.69□□□□□ -1.02
FOXN3-215ENST00000557261 ERCC3P19447 782 aa8.69□□□□□ -1.02
FOXN3-215ENST00000557261 APLP1P51693 650 aa8.69□□□□□ -1.02
FOXN3-215ENST00000557261 H3BRB1 525 aa8.68□□□□□ -1.02
FOXN3-215ENST00000557261 ZBTB7BO15156 539 aaPredicted RBP8.68□□□□□ -1.02
FOXN3-215ENST00000557261 CTHP32929 405 aa8.68□□□□□ -1.02
FOXN3-215ENST00000557261 ECM1Q16610 540 aa8.68□□□□□ -1.02
FOXN3-215ENST00000557261 TRAF7Q6Q0C0 670 aa8.68□□□□□ -1.02
FOXN3-215ENST00000557261 CAPN12Q6ZSI9 719 aa8.68□□□□□ -1.02
FOXN3-215ENST00000557261 FBXO33Q7Z6M2 555 aa8.68□□□□□ -1.02
FOXN3-215ENST00000557261 PUS7Q96PZ0 661 aaKnown RBP8.68□□□□□ -1.02
FOXN3-215ENST00000557261 TUT1Q9H6E5 874 aaKnown RBP8.68□□□□□ -1.02
FOXN3-215ENST00000557261 IL21Q9HBE4 155 aa8.68□□□□□ -1.02
FOXN3-215ENST00000557261 INO80Q9ULG1 1556 aaPredicted RBP8.68□□□□□ -1.02
FOXN3-215ENST00000557261 MTMR3Q13615 1198 aa8.67□□□□□ -1.02
FOXN3-215ENST00000557261 OCLNQ16625 522 aa8.67□□□□□ -1.02
FOXN3-215ENST00000557261 C9orf84Q5VXU9 1444 aa8.67□□□□□ -1.02
FOXN3-215ENST00000557261 DHX57Q6P158 1386 aaKnown RBP8.67□□□□□ -1.02
FOXN3-215ENST00000557261 CCDC85AQ96PX6 553 aaPredicted RBP8.67□□□□□ -1.02
FOXN3-215ENST00000557261 USB1Q9BQ65 265 aaKnown RBP8.67□□□□□ -1.02
FOXN3-215ENST00000557261 KDM5DQ9BY66 1539 aa8.67□□□□□ -1.02
FOXN3-215ENST00000557261 DNAAF2Q9NVR5 837 aaKnown RBP8.67□□□□□ -1.02
FOXN3-215ENST00000557261 DIP2BQ9P265 1576 aa8.67□□□□□ -1.02
FOXN3-215ENST00000557261 CHIC2Q9UKJ5 165 aa8.67□□□□□ -1.02
FOXN3-215ENST00000557261 NEO1Q92859 1461 aa8.66□□□□□ -1.02
FOXN3-215ENST00000557261 NCOA1Q15788 1441 aa8.66□□□□□ -1.02
FOXN3-215ENST00000557261 SFI1A8K8P3 1242 aa8.66□□□□□ -1.02
FOXN3-215ENST00000557261 ACTN4O43707 911 aaKnown RBP8.66□□□□□ -1.02
FOXN3-215ENST00000557261 RECKO95980 971 aa8.66□□□□□ -1.02
FOXN3-215ENST00000557261 Q3C1V9 767 aa8.66□□□□□ -1.02
FOXN3-215ENST00000557261 KMT5BQ4FZB7 885 aa8.66□□□□□ -1.02
FOXN3-215ENST00000557261 BRICD5Q6PL45 260 aa8.66□□□□□ -1.02
FOXN3-215ENST00000557261 SEPT3Q9UH03 358 aa8.66□□□□□ -1.02
FOXN3-215ENST00000557261 KDM5CP41229 1560 aa8.65□□□□□ -1.02
FOXN3-215ENST00000557261 ZFYVE16Q7Z3T8 1539 aa8.65□□□□□ -1.02
FOXN3-215ENST00000557261 FANCAO15360 1455 aa8.65□□□□□ -1.02
FOXN3-215ENST00000557261 RTEL1-TNFRSF6BF6WH68 1400 aa8.65□□□□□ -1.02
FOXN3-215ENST00000557261 EML3Q32P44 896 aa8.65□□□□□ -1.02
FOXN3-215ENST00000557261 TAS1R3Q7RTX0 852 aa8.65□□□□□ -1.02
FOXN3-215ENST00000557261 PURBQ96QR8 312 aaKnown RBP8.65□□□□□ -1.02
FOXN3-215ENST00000557261 EIF2AK4Q9P2K8 1649 aaKnown RBP8.65□□□□□ -1.03
FOXN3-215ENST00000557261 UNC13BO14795 1591 aa8.65□□□□□ -1.03
FOXN3-215ENST00000557261 ANKRD30AQ9BXX3 1397 aa8.64□□□□□ -1.03
FOXN3-215ENST00000557261 JUNDP17535 347 aa8.64□□□□□ -1.03
FOXN3-215ENST00000557261 SLC4A3P48751 1232 aa8.64□□□□□ -1.03
FOXN3-215ENST00000557261 SWI5Q1ZZU3 235 aa8.64□□□□□ -1.03
FOXN3-215ENST00000557261 ZNF516Q92618 1163 aa8.64□□□□□ -1.03
FOXN3-215ENST00000557261 CXXC1Q9P0U4 656 aaPredicted RBP8.64□□□□□ -1.03
FOXN3-215ENST00000557261 DNMT3AQ9Y6K1 912 aaPredicted RBP8.64□□□□□ -1.03
FOXN3-215ENST00000557261 MAGI2Q86UL8 1455 aa8.64□□□□□ -1.03
FOXN3-215ENST00000557261 BCORL1Q5H9F3 1711 aa8.63□□□□□ -1.03
FOXN3-215ENST00000557261 ZC3H4Q9UPT8 1303 aaKnown RBP8.63□□□□□ -1.03
FOXN3-215ENST00000557261 ICMTO60725 284 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms