RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 VWA5B2Q8N398 1253 aa8.66□□□□□ -1.02
ATXN3-246ENST00000557030 GMCL1Q96IK5 515 aa8.66□□□□□ -1.02
ATXN3-246ENST00000557030 NOD1Q9Y239 953 aa8.66□□□□□ -1.02
ATXN3-246ENST00000557030 GTF3C3Q9Y5Q9 886 aa8.66□□□□□ -1.02
ATXN3-246ENST00000557030 ZBTB7BO15156 539 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-246ENST00000557030 THBS1P07996 1170 aa8.65□□□□□ -1.02
ATXN3-246ENST00000557030 DBN1Q16643 649 aa8.65□□□□□ -1.02
ATXN3-246ENST00000557030 SV2AQ7L0J3 742 aa8.65□□□□□ -1.02
ATXN3-246ENST00000557030 TRIM22Q8IYM9 498 aa8.65□□□□□ -1.02
ATXN3-246ENST00000557030 DEPDC4Q8N2C3 294 aa8.65□□□□□ -1.02
ATXN3-246ENST00000557030 IQSEC3Q9UPP2 1182 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-246ENST00000557030 USP17L3A6NCW0 530 aa8.64□□□□□ -1.03
ATXN3-246ENST00000557030 USP17L4A6NCW7 530 aa8.64□□□□□ -1.03
ATXN3-246ENST00000557030 SMTNP53814 917 aa8.64□□□□□ -1.03
ATXN3-246ENST00000557030 GTF2IP78347 998 aa8.64□□□□□ -1.03
ATXN3-246ENST00000557030 C4orf17Q53FE4 359 aa8.64□□□□□ -1.03
ATXN3-246ENST00000557030 RNFT1Q5M7Z0 435 aa8.64□□□□□ -1.03
ATXN3-246ENST00000557030 USP17L2Q6R6M4 530 aa8.64□□□□□ -1.03
ATXN3-246ENST00000557030 USP17L1Q7RTZ2 530 aa8.64□□□□□ -1.03
ATXN3-246ENST00000557030 ZNF837Q96EG3 531 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-246ENST00000557030 DKK1O94907 266 aa8.63□□□□□ -1.03
ATXN3-246ENST00000557030 TLR1Q15399 786 aa8.63□□□□□ -1.03
ATXN3-246ENST00000557030 RHBDD1Q8TEB9 315 aa8.63□□□□□ -1.03
ATXN3-246ENST00000557030 COL25A1Q9BXS0 654 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-246ENST00000557030 TIMMDC1Q9NPL8 285 aa8.63□□□□□ -1.03
ATXN3-246ENST00000557030 CLDN10P78369 228 aa8.62□□□□□ -1.03
ATXN3-246ENST00000557030 GAS6Q14393 721 aa8.62□□□□□ -1.03
ATXN3-246ENST00000557030 ZSCAN1Q8NBB4 408 aa8.62□□□□□ -1.03
ATXN3-246ENST00000557030 STK17AQ9UEE5 414 aa8.62□□□□□ -1.03
ATXN3-246ENST00000557030 KIAA1024Q9UPX6 916 aa8.62□□□□□ -1.03
ATXN3-246ENST00000557030 A0A1B0GTH6 734 aa8.61□□□□□ -1.03
ATXN3-246ENST00000557030 CDC14CA4D256 554 aa8.61□□□□□ -1.03
ATXN3-246ENST00000557030 F11P03951 625 aa8.61□□□□□ -1.03
ATXN3-246ENST00000557030 EPHA4P54764 986 aa8.61□□□□□ -1.03
ATXN3-246ENST00000557030 UBAP2LQ14157 1087 aaKnown RBP8.61□□□□□ -1.03
ATXN3-246ENST00000557030 TMEM214Q6NUQ4 689 aaKnown RBP8.61□□□□□ -1.03
ATXN3-246ENST00000557030 USP3Q9Y6I4 520 aa8.61□□□□□ -1.03
ATXN3-246ENST00000557030 A6NJY4 79 aa8.6□□□□□ -1.03
ATXN3-246ENST00000557030 CDK2AP1O14519 115 aa8.6□□□□□ -1.03
ATXN3-246ENST00000557030 SLURP2P0DP57 97 aa8.6□□□□□ -1.03
ATXN3-246ENST00000557030 GNASQ5JWF2 1037 aa8.6□□□□□ -1.03
ATXN3-246ENST00000557030 CNTNAP3BQ96NU0 1288 aa8.6□□□□□ -1.03
ATXN3-246ENST00000557030 CNTNAP3Q9BZ76 1288 aa8.6□□□□□ -1.03
ATXN3-246ENST00000557030 PPP1R12CQ9BZL4 782 aa8.6□□□□□ -1.03
ATXN3-246ENST00000557030 ZNF358Q9NW07 568 aa8.6□□□□□ -1.03
ATXN3-246ENST00000557030 TFIP11Q9UBB9 837 aaKnown RBP8.6□□□□□ -1.03
ATXN3-246ENST00000557030 MAFBQ9Y5Q3 323 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-246ENST00000557030 PALM3A6NDB9 673 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-246ENST00000557030 H7C1W4 665 aa8.59□□□□□ -1.03
ATXN3-246ENST00000557030 PHKA2P46019 1235 aa8.59□□□□□ -1.03
ATXN3-246ENST00000557030 FOXK2Q01167 660 aa8.59□□□□□ -1.03
ATXN3-246ENST00000557030 TRIM50Q86XT4 487 aa8.59□□□□□ -1.03
ATXN3-246ENST00000557030 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.59□□□□□ -1.03
ATXN3-246ENST00000557030 GAS2L1Q99501 681 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-246ENST00000557030 MKRN1Q9UHC7 482 aaKnown RBP8.59□□□□□ -1.03
ATXN3-246ENST00000557030 SIX5Q8N196 739 aa8.58□□□□□ -1.04
ATXN3-246ENST00000557030 LARGE2Q8N3Y3 721 aa8.58□□□□□ -1.04
ATXN3-246ENST00000557030 CALR3Q96L12 384 aaKnown RBP8.58□□□□□ -1.04
ATXN3-246ENST00000557030 SCHIP1Q9P0W5 487 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-246ENST00000557030 SERTAD1Q9UHV2 236 aa8.58□□□□□ -1.04
ATXN3-246ENST00000557030 BACH1O14867 736 aa8.57□□□□□ -1.04
ATXN3-246ENST00000557030 MSX1P28360 303 aa8.57□□□□□ -1.04
ATXN3-246ENST00000557030 ATP1A2P50993 1020 aa8.57□□□□□ -1.04
ATXN3-246ENST00000557030 RIPOR1Q6ZS17 1223 aa8.57□□□□□ -1.04
ATXN3-246ENST00000557030 CRISPLD1Q9H336 500 aa8.57□□□□□ -1.04
ATXN3-246ENST00000557030 M0R2N6 131 aa8.56□□□□□ -1.04
ATXN3-246ENST00000557030 ATP4AP20648 1035 aa8.56□□□□□ -1.04
ATXN3-246ENST00000557030 GTF2E1P29083 439 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-246ENST00000557030 LBRQ14739 615 aaKnown RBP8.56□□□□□ -1.04
ATXN3-246ENST00000557030 KANK4Q5T7N3 995 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-246ENST00000557030 CCDC102BQ68D86 513 aa8.56□□□□□ -1.04
ATXN3-246ENST00000557030 OGFOD1Q8N543 542 aa8.56□□□□□ -1.04
ATXN3-246ENST00000557030 NIFKQ9BYG3 293 aaKnown RBP8.56□□□□□ -1.04
ATXN3-246ENST00000557030 NUCKS1Q9H1E3 243 aaKnown RBP8.56□□□□□ -1.04
ATXN3-246ENST00000557030 DNAAF2Q9NVR5 837 aaKnown RBP8.56□□□□□ -1.04
ATXN3-246ENST00000557030 POTEAQ6S8J7 498 aa8.55□□□□□ -1.04
ATXN3-246ENST00000557030 ZNF777Q9ULD5 760 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-246ENST00000557030 GPR25O00155 361 aa8.54□□□□□ -1.04
ATXN3-246ENST00000557030 PLA2G4AP47712 749 aa8.54□□□□□ -1.04
ATXN3-246ENST00000557030 SRSF11Q05519 484 aaKnown RBP8.54□□□□□ -1.04
ATXN3-246ENST00000557030 CFAP70Q5T0N1 1121 aa8.54□□□□□ -1.04
ATXN3-246ENST00000557030 TPCN2Q8NHX9 752 aa8.54□□□□□ -1.04
ATXN3-246ENST00000557030 C1orf216Q8TAB5 229 aa8.54□□□□□ -1.04
ATXN3-246ENST00000557030 ZDHHC1Q8WTX9 485 aa8.54□□□□□ -1.04
ATXN3-246ENST00000557030 GTPBP3Q969Y2 492 aaKnown RBP8.54□□□□□ -1.04
ATXN3-246ENST00000557030 GPAMQ9HCL2 828 aa8.54□□□□□ -1.04
ATXN3-246ENST00000557030 NDFIP2Q9NV92 336 aa8.54□□□□□ -1.04
ATXN3-246ENST00000557030 PSME1Q06323 249 aa8.53□□□□□ -1.04
ATXN3-246ENST00000557030 ZNF385CQ66K41 422 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-246ENST00000557030 C7orf43Q8WVR3 580 aa8.53□□□□□ -1.04
ATXN3-246ENST00000557030 CFHR5Q9BXR6 569 aa8.53□□□□□ -1.04
ATXN3-246ENST00000557030 ZMYND15Q9H091 742 aa8.53□□□□□ -1.04
ATXN3-246ENST00000557030 RUBCNLQ9H714 662 aa8.53□□□□□ -1.04
ATXN3-246ENST00000557030 MBIPQ9NS73 344 aa8.53□□□□□ -1.04
ATXN3-246ENST00000557030 TEAD4Q15561 434 aa8.52□□□□□ -1.05
ATXN3-246ENST00000557030 TNS4Q8IZW8 715 aa8.52□□□□□ -1.05
ATXN3-246ENST00000557030 ZDHHC3Q9NYG2 299 aa8.52□□□□□ -1.05
ATXN3-246ENST00000557030 ADAMTS2O95450 1211 aa8.51□□□□□ -1.05
ATXN3-246ENST00000557030 PTK7Q13308 1070 aa8.51□□□□□ -1.05
ATXN3-246ENST00000557030 CRTC2Q53ET0 693 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms