RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ESF1Q9H501 851 aaKnown RBP7.51□□□□□ -1.21
SRP54-212ENST00000556992 GOPCQ9HD26 462 aa7.51□□□□□ -1.21
SRP54-212ENST00000556992 SNRKQ9NRH2 765 aa7.51□□□□□ -1.21
SRP54-212ENST00000556992 SCRIBQ14160 1630 aa7.51□□□□□ -1.21
SRP54-212ENST00000556992 OIP5O43482 229 aa7.5□□□□□ -1.21
SRP54-212ENST00000556992 TSGA10IPQ3SY00 556 aa7.5□□□□□ -1.21
SRP54-212ENST00000556992 OXCT2Q9BYC2 517 aaPredicted RBP7.5□□□□□ -1.21
SRP54-212ENST00000556992 RUBCNLQ9H714 662 aa7.5□□□□□ -1.21
SRP54-212ENST00000556992 ESYT1Q9BSJ8 1104 aa7.49□□□□□ -1.21
SRP54-212ENST00000556992 ADAM23O75077 832 aa7.48□□□□□ -1.21
SRP54-212ENST00000556992 GALNT6Q8NCL4 622 aa7.48□□□□□ -1.21
SRP54-212ENST00000556992 TRIM52Q96A61 297 aa7.48□□□□□ -1.21
SRP54-212ENST00000556992 KLRG1Q96E93 195 aa7.48□□□□□ -1.21
SRP54-212ENST00000556992 ZSCAN10Q96SZ4 725 aaPredicted RBP7.48□□□□□ -1.21
SRP54-212ENST00000556992 RSF1Q96T23 1441 aaPredicted RBP7.48□□□□□ -1.21
SRP54-212ENST00000556992 NDUFB9Q9Y6M9 179 aa7.48□□□□□ -1.21
SRP54-212ENST00000556992 GNRH1P01148 92 aa7.47□□□□□ -1.21
SRP54-212ENST00000556992 UBAP2LQ14157 1087 aaKnown RBP7.47□□□□□ -1.21
SRP54-212ENST00000556992 C4orf17Q53FE4 359 aa7.47□□□□□ -1.21
SRP54-212ENST00000556992 RRAGCQ9HB90 399 aa7.47□□□□□ -1.21
SRP54-212ENST00000556992 NSFL1CQ9UNZ2 370 aaKnown RBP7.47□□□□□ -1.21
SRP54-212ENST00000556992 KRBA1A5PL33 1030 aa7.46□□□□□ -1.22
SRP54-212ENST00000556992 WDR44Q5JSH3 913 aa7.46□□□□□ -1.22
SRP54-212ENST00000556992 ABHD17AQ96GS6 310 aa7.46□□□□□ -1.22
SRP54-212ENST00000556992 BCANQ96GW7 911 aa7.46□□□□□ -1.22
SRP54-212ENST00000556992 FHDC1Q9C0D6 1143 aaPredicted RBP7.46□□□□□ -1.22
SRP54-212ENST00000556992 CEP126Q9P2H0 1117 aa7.46□□□□□ -1.22
SRP54-212ENST00000556992 HRH3Q9Y5N1 445 aa7.46□□□□□ -1.22
SRP54-212ENST00000556992 C2CD2LO14523 706 aa7.45□□□□□ -1.22
SRP54-212ENST00000556992 COL8A1P27658 744 aa7.45□□□□□ -1.22
SRP54-212ENST00000556992 MSX1P28360 303 aa7.45□□□□□ -1.22
SRP54-212ENST00000556992 MAP2K3P46734 347 aa7.45□□□□□ -1.22
SRP54-212ENST00000556992 XP32Q5T750 250 aa7.45□□□□□ -1.22
SRP54-212ENST00000556992 TMEM214Q6NUQ4 689 aaKnown RBP7.45□□□□□ -1.22
SRP54-212ENST00000556992 CCDC125Q86Z20 511 aa7.45□□□□□ -1.22
SRP54-212ENST00000556992 SUV39H2Q9H5I1 410 aa7.45□□□□□ -1.22
SRP54-212ENST00000556992 ZNF330Q9Y3S2 320 aaPredicted RBP7.45□□□□□ -1.22
SRP54-212ENST00000556992 BICRAQ9NZM4 1560 aa7.45□□□□□ -1.22
SRP54-212ENST00000556992 A0A1B0GTH6 734 aa7.44□□□□□ -1.22
SRP54-212ENST00000556992 MYCP01106 439 aaPredicted RBP7.44□□□□□ -1.22
SRP54-212ENST00000556992 MCCD1P59942 119 aaPredicted RBP7.44□□□□□ -1.22
SRP54-212ENST00000556992 EDARADDQ8WWZ3 215 aa7.44□□□□□ -1.22
SRP54-212ENST00000556992 XAGE2Q96GT9 111 aa7.44□□□□□ -1.22
SRP54-212ENST00000556992 CFHR5Q9BXR6 569 aa7.44□□□□□ -1.22
SRP54-212ENST00000556992 ETNK1Q9HBU6 452 aa7.44□□□□□ -1.22
SRP54-212ENST00000556992 BRPF1P55201 1214 aaPredicted RBP7.43□□□□□ -1.22
SRP54-212ENST00000556992 CTBSQ01459 385 aa7.43□□□□□ -1.22
SRP54-212ENST00000556992 GRIN2CQ14957 1233 aa7.43□□□□□ -1.22
SRP54-212ENST00000556992 GNASQ5JWF2 1037 aa7.43□□□□□ -1.22
SRP54-212ENST00000556992 TBC1D2BQ9UPU7 963 aa7.43□□□□□ -1.22
SRP54-212ENST00000556992 BNIP3LO60238 219 aa7.42□□□□□ -1.22
SRP54-212ENST00000556992 CSB-PGBD3P0DP91 1061 aa7.42□□□□□ -1.22
SRP54-212ENST00000556992 BMP4P12644 408 aa7.42□□□□□ -1.22
SRP54-212ENST00000556992 OXLD1Q5BKU9 147 aa7.42□□□□□ -1.22
SRP54-212ENST00000556992 PGBD3Q8N328 593 aa7.42□□□□□ -1.22
SRP54-212ENST00000556992 BANK1Q8NDB2 785 aa7.42□□□□□ -1.22
SRP54-212ENST00000556992 GGA1Q9UJY5 639 aa7.42□□□□□ -1.22
SRP54-212ENST00000556992 CECR2Q9BXF3 1484 aa7.42□□□□□ -1.22
SRP54-212ENST00000556992 FURINP09958 794 aa7.41□□□□□ -1.22
SRP54-212ENST00000556992 HOXB4P17483 251 aaPredicted RBP7.41□□□□□ -1.22
SRP54-212ENST00000556992 AMPD1P23109 780 aa7.41□□□□□ -1.22
SRP54-212ENST00000556992 PLA2G4AP47712 749 aa7.41□□□□□ -1.22
SRP54-212ENST00000556992 TLR1Q15399 786 aa7.41□□□□□ -1.22
SRP54-212ENST00000556992 LRRC4BQ9NT99 713 aa7.41□□□□□ -1.22
SRP54-212ENST00000556992 MKL2Q9ULH7 1088 aa7.41□□□□□ -1.22
SRP54-212ENST00000556992 DOLKQ9UPQ8 538 aa7.41□□□□□ -1.22
SRP54-212ENST00000556992 PHF24Q9UPV7 400 aa7.41□□□□□ -1.22
SRP54-212ENST00000556992 FGFR3P22607 806 aa7.4□□□□□ -1.22
SRP54-212ENST00000556992 GTF2E1P29083 439 aaPredicted RBP7.4□□□□□ -1.22
SRP54-212ENST00000556992 BAG6P46379 1132 aa7.4□□□□□ -1.22
SRP54-212ENST00000556992 K7ELQ4 463 aaPredicted RBP7.39□□□□□ -1.23
SRP54-212ENST00000556992 RHBDD1Q8TEB9 315 aa7.39□□□□□ -1.23
SRP54-212ENST00000556992 NDFIP2Q9NV92 336 aa7.39□□□□□ -1.23
SRP54-212ENST00000556992 HCN2Q9UL51 889 aa7.39□□□□□ -1.23
SRP54-212ENST00000556992 ATXN7L1Q9ULK2 861 aaPredicted RBP7.39□□□□□ -1.23
SRP54-212ENST00000556992 IRF5Q13568 498 aa7.38□□□□□ -1.23
SRP54-212ENST00000556992 ESCO1Q5FWF5 840 aa7.38□□□□□ -1.23
SRP54-212ENST00000556992 EFHC2Q5JST6 749 aa7.38□□□□□ -1.23
SRP54-212ENST00000556992 LINC00114Q6XXX2 140 aa7.38□□□□□ -1.23
SRP54-212ENST00000556992 PHTF2Q8N3S3 785 aa7.38□□□□□ -1.23
SRP54-212ENST00000556992 GOLGA6L1Q8N7Z2 621 aa7.38□□□□□ -1.23
SRP54-212ENST00000556992 ZNF592Q92610 1267 aa7.38□□□□□ -1.23
SRP54-212ENST00000556992 GDF2Q9UK05 429 aaPredicted RBP7.38□□□□□ -1.23
SRP54-212ENST00000556992 NEURL1BA8MQ27 555 aa7.37□□□□□ -1.23
SRP54-212ENST00000556992 SCNN1DP51172 638 aa7.37□□□□□ -1.23
SRP54-212ENST00000556992 VAC14Q08AM6 782 aa7.37□□□□□ -1.23
SRP54-212ENST00000556992 PPARGC1BQ86YN6 1023 aaKnown RBP7.37□□□□□ -1.23
SRP54-212ENST00000556992 RNF135Q8IUD6 432 aa7.37□□□□□ -1.23
SRP54-212ENST00000556992 DNAAF2Q9NVR5 837 aaKnown RBP7.37□□□□□ -1.23
SRP54-212ENST00000556992 DCDC2BA2VCK2 349 aa7.36□□□□□ -1.23
SRP54-212ENST00000556992 ATP4AP20648 1035 aa7.36□□□□□ -1.23
SRP54-212ENST00000556992 SLFNL1Q499Z3 407 aa7.36□□□□□ -1.23
SRP54-212ENST00000556992 SLCO4C1Q6ZQN7 724 aa7.36□□□□□ -1.23
SRP54-212ENST00000556992 AIDAQ96BJ3 306 aa7.36□□□□□ -1.23
SRP54-212ENST00000556992 ZCCHC2Q9C0B9 1178 aaKnown RBP7.36□□□□□ -1.23
SRP54-212ENST00000556992 EPXP11678 715 aa7.35□□□□□ -1.23
SRP54-212ENST00000556992 CD33P20138 364 aa7.35□□□□□ -1.23
SRP54-212ENST00000556992 GDF10P55107 478 aa7.35□□□□□ -1.23
SRP54-212ENST00000556992 USP4Q13107 963 aa7.35□□□□□ -1.23
SRP54-212ENST00000556992 LBRQ14739 615 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms