RNA–Protein interactions for RNA: ENST00000556959.1

SIPA1L1-215, Transcript of signal induced proliferation associated 1 like 1, human

TSL 3

Gene SIPA1L1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L1-215	ENST00000556959	KNSTRN	Q9Y448	316 aa		11.25	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	ADCY9	O60503	1353 aa		11.25	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	SLC4A9	Q96Q91	983 aa		11.24	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.24	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	CD2AP	Q9Y5K6	639 aa		11.24	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	KIF3C	O14782	793 aa		11.23	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	PHKG2	P15735	406 aa		11.23	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	HTRA3	P83110	453 aa		11.23	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	AK7	Q96M32	723 aa		11.23	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	LOC102724428	A0A0B4J2F2	783 aa		11.22	□□□□□ -0.61
SIPA1L1-215	ENST00000556959		A0A0G2JLW4	131 aa		11.22	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	GNPAT	O15228	680 aa		11.22	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	IL13	P35225	146 aa		11.22	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	SIK1	P57059	783 aa		11.22	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	SPG7	Q9UQ90	795 aa		11.22	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	BRCA1	P38398	1863 aa	Known RBP	11.21	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	KIF13B	Q9NQT8	1826 aa		11.21	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	CC2D1B	Q5T0F9	858 aa	Known RBP	11.21	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	ATG3	Q9NT62	314 aa		11.21	□□□□□ -0.61
SIPA1L1-215	ENST00000556959	KDM6A	O15550	1401 aa	Predicted RBP	11.2	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	KDR	P35968	1356 aa		11.2	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	MMP10	P09238	476 aa		11.2	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	HSPA6	P17066	643 aa		11.2	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	ATP6V1A	P38606	617 aa		11.2	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	MTHFS	P49914	203 aa		11.2	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	IFNL2	Q8IZJ0	200 aa		11.2	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	CIC	Q96RK0	1608 aa	Predicted RBP	11.2	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	PLEKHG2	Q9H7P9	1386 aa		11.19	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	C4A	P0C0L4	1744 aa		11.19	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	SULT6B1	Q6IMI4	303 aa		11.19	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	NMRK2	Q9NPI5	230 aa		11.19	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	PXDNL	A1KZ92	1463 aa		11.19	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	COL5A3	P25940	1745 aa	Predicted RBP	11.18	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	DPEP1	P16444	411 aa		11.18	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	TMOD3	Q9NYL9	352 aa		11.18	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	SBF1	O95248	1867 aa		11.18	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	CCDC88A	Q3V6T2	1871 aa		11.18	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	NPC1L1	Q9UHC9	1359 aa		11.17	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	CNGB1	Q14028	1251 aa	Predicted RBP	11.17	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.17	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	SMARCC1	Q92922	1105 aa	Predicted RBP	11.17	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	RBM42	Q9BTD8	480 aa	Known RBP	11.17	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	SRP68	Q9UHB9	627 aa	Known RBP	11.17	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	BCS1L	Q9Y276	419 aa		11.17	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	COL3A1	P02461	1466 aa	Predicted RBP	11.17	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	VIRMA	Q69YN4	1812 aa	Known RBP	11.16	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.16	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	ARHGAP27	Q6ZUM4	889 aa		11.16	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	FLAD1	Q8NFF5	587 aa		11.16	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	ARHGEF1	Q92888	912 aa	Known RBP	11.16	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	HMOX1	P09601	288 aa		11.15	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	KCNA3	P22001	575 aa		11.15	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	SSFA2	P28290	1259 aa		11.15	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	AMOT	Q4VCS5	1084 aa		11.15	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	DNAJC5G	Q8N7S2	189 aa		11.15	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	DCAF5	Q96JK2	942 aa		11.15	□□□□□ -0.62
SIPA1L1-215	ENST00000556959	PCNT	O95613	3336 aa		11.14	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	ERVV-2	B6SEH9	535 aa		11.14	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	GYS1	P13807	737 aa		11.14	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	ARFGEF1	Q9Y6D6	1849 aa		11.14	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	TJP1	Q07157	1748 aa		11.13	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	PTCD1	O75127	700 aa	Known RBP	11.13	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	CHRNA5	P30532	468 aa		11.13	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	DDR1	Q08345	913 aa		11.13	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	TRAPPC3L	Q5T215	181 aa		11.13	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	AFDN	P55196	1824 aa	Known RBP	11.13	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	WDR90	Q96KV7	1748 aa		11.12	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	C10orf71	Q711Q0	1435 aa		11.12	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	ADAMTS7	Q9UKP4	1686 aa		11.12	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	DIAPH1	O60610	1272 aa	Known RBP	11.12	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	FCHSD2	O94868	740 aa		11.12	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	HSP90AB1	P08238	724 aa	Known RBP	11.12	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	FKBP8	Q14318	412 aa		11.12	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	NFATC2IP	Q8NCF5	419 aa		11.12	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	LGR6	Q9HBX8	967 aa		11.12	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	KCP	Q6ZWJ8	1503 aa		11.11	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	PRELP	P51888	382 aa		11.11	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	CABP4	P57796	275 aa		11.11	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	MTHFSD	Q2M296	383 aa	Known RBP	11.11	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	C1orf141	Q5JVX7	400 aa		11.11	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	C9orf131	Q5VYM1	1079 aa		11.11	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	RTCB	Q9Y3I0	505 aa	Known RBP	11.11	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	SCN11A	Q9UI33	1791 aa		11.1	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	MRC1	P22897	1456 aa		11.09	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	RPS6KA4	O75676	772 aa		11.09	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	PPP2R1A	P30153	589 aa		11.09	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	AKAP4	Q5JQC9	854 aa		11.09	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.09	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	RRAGC	Q9HB90	399 aa		11.09	□□□□□ -0.63
SIPA1L1-215	ENST00000556959	U2SURP	O15042	1029 aa	Known RBP	11.08	□□□□□ -0.64
SIPA1L1-215	ENST00000556959	RNMT	O43148	476 aa	Known RBP	11.08	□□□□□ -0.64
SIPA1L1-215	ENST00000556959	CAPN15	O75808	1086 aa		11.08	□□□□□ -0.64
SIPA1L1-215	ENST00000556959	RFC4	P35249	363 aa		11.08	□□□□□ -0.64
SIPA1L1-215	ENST00000556959	CRKL	P46109	303 aa	Known RBP	11.08	□□□□□ -0.64
SIPA1L1-215	ENST00000556959	TGFB2	P61812	414 aa		11.08	□□□□□ -0.64
SIPA1L1-215	ENST00000556959	RASSF7	Q02833	373 aa		11.08	□□□□□ -0.64
SIPA1L1-215	ENST00000556959	INTS5	Q6P9B9	1019 aa	Known RBP	11.08	□□□□□ -0.64
SIPA1L1-215	ENST00000556959	PHACTR3	Q96KR7	559 aa		11.08	□□□□□ -0.64
SIPA1L1-215	ENST00000556959	CNTNAP4	Q9C0A0	1308 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms