RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 GMCL1Q96IK5 515 aa10.02□□□□□ -0.81
LINC00648-203ENST00000556923 EML3Q32P44 896 aa10.01□□□□□ -0.81
LINC00648-203ENST00000556923 C4orf17Q53FE4 359 aa10.01□□□□□ -0.81
LINC00648-203ENST00000556923 GNASQ5JWF2 1037 aa10.01□□□□□ -0.81
LINC00648-203ENST00000556923 PCDHGA11Q9Y5H2 935 aa10.01□□□□□ -0.81
LINC00648-203ENST00000556923 TMEM229AB2RXF0 380 aa10□□□□□ -0.81
LINC00648-203ENST00000556923 GPR25O00155 361 aa10□□□□□ -0.81
LINC00648-203ENST00000556923 F11P03951 625 aa10□□□□□ -0.81
LINC00648-203ENST00000556923 NCOA4Q13772 614 aa10□□□□□ -0.81
LINC00648-203ENST00000556923 RHBDD1Q8TEB9 315 aa10□□□□□ -0.81
LINC00648-203ENST00000556923 H7C1W4 665 aa9.99□□□□□ -0.81
LINC00648-203ENST00000556923 SLURP2P0DP57 97 aa9.99□□□□□ -0.81
LINC00648-203ENST00000556923 GTF2E1P29083 439 aaPredicted RBP9.99□□□□□ -0.81
LINC00648-203ENST00000556923 HDGFL1Q5TGJ6 251 aa9.99□□□□□ -0.81
LINC00648-203ENST00000556923 PPARGC1BQ86YN6 1023 aaKnown RBP9.99□□□□□ -0.81
LINC00648-203ENST00000556923 FNBP4Q8N3X1 1017 aaPredicted RBP9.99□□□□□ -0.81
LINC00648-203ENST00000556923 UCN2Q96RP3 112 aa9.99□□□□□ -0.81
LINC00648-203ENST00000556923 A0A1B0GTH6 734 aa9.98□□□□□ -0.81
LINC00648-203ENST00000556923 USP17L5A8MUK1 530 aa9.98□□□□□ -0.81
LINC00648-203ENST00000556923 THBS1P07996 1170 aa9.98□□□□□ -0.81
LINC00648-203ENST00000556923 DEPDC4Q8N2C3 294 aa9.98□□□□□ -0.81
LINC00648-203ENST00000556923 GTPBP3Q969Y2 492 aaKnown RBP9.98□□□□□ -0.81
LINC00648-203ENST00000556923 GPAMQ9HCL2 828 aa9.98□□□□□ -0.81
LINC00648-203ENST00000556923 NOD1Q9Y239 953 aa9.98□□□□□ -0.81
LINC00648-203ENST00000556923 LZTS3O60299 673 aaPredicted RBP9.97□□□□□ -0.81
LINC00648-203ENST00000556923 ZNF385CQ66K41 422 aaPredicted RBP9.97□□□□□ -0.81
LINC00648-203ENST00000556923 PROSER2Q86WR7 435 aaPredicted RBP9.97□□□□□ -0.81
LINC00648-203ENST00000556923 WHAMMQ8TF30 809 aa9.97□□□□□ -0.81
LINC00648-203ENST00000556923 NUCKS1Q9H1E3 243 aaKnown RBP9.97□□□□□ -0.81
LINC00648-203ENST00000556923 SERTAD1Q9UHV2 236 aa9.97□□□□□ -0.81
LINC00648-203ENST00000556923 SMTNP53814 917 aa9.96□□□□□ -0.82
LINC00648-203ENST00000556923 GTF2IP78347 998 aa9.96□□□□□ -0.82
LINC00648-203ENST00000556923 FOXR1Q6PIV2 292 aa9.96□□□□□ -0.82
LINC00648-203ENST00000556923 TBC1D9Q6ZT07 1266 aa9.96□□□□□ -0.82
LINC00648-203ENST00000556923 ADAMTS2O95450 1211 aa9.95□□□□□ -0.82
LINC00648-203ENST00000556923 SRSF11Q05519 484 aaKnown RBP9.95□□□□□ -0.82
LINC00648-203ENST00000556923 SLC4A9Q96Q91 983 aa9.95□□□□□ -0.82
LINC00648-203ENST00000556923 MSX1P28360 303 aa9.94□□□□□ -0.82
LINC00648-203ENST00000556923 PLA2G4AP47712 749 aa9.94□□□□□ -0.82
LINC00648-203ENST00000556923 RUBCNLQ9H714 662 aa9.94□□□□□ -0.82
LINC00648-203ENST00000556923 MBIPQ9NS73 344 aa9.94□□□□□ -0.82
LINC00648-203ENST00000556923 USP17L3A6NCW0 530 aa9.93□□□□□ -0.82
LINC00648-203ENST00000556923 USP17L4A6NCW7 530 aa9.93□□□□□ -0.82
LINC00648-203ENST00000556923 MTFR1Q15390 333 aa9.93□□□□□ -0.82
LINC00648-203ENST00000556923 USP17L2Q6R6M4 530 aa9.93□□□□□ -0.82
LINC00648-203ENST00000556923 USP17L1Q7RTZ2 530 aa9.93□□□□□ -0.82
LINC00648-203ENST00000556923 PLEKHM2Q8IWE5 1019 aa9.93□□□□□ -0.82
LINC00648-203ENST00000556923 ZNF295-AS1Q8N0V1 137 aa9.93□□□□□ -0.82
LINC00648-203ENST00000556923 SVOPQ8N4V2 548 aa9.93□□□□□ -0.82
LINC00648-203ENST00000556923 IQSEC3Q9UPP2 1182 aaPredicted RBP9.93□□□□□ -0.82
LINC00648-203ENST00000556923 USP3Q9Y6I4 520 aa9.93□□□□□ -0.82
LINC00648-203ENST00000556923 A6NJY4 79 aa9.92□□□□□ -0.82
LINC00648-203ENST00000556923 ATP9BO43861 1147 aa9.92□□□□□ -0.82
LINC00648-203ENST00000556923 PSME1Q06323 249 aa9.92□□□□□ -0.82
LINC00648-203ENST00000556923 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.92□□□□□ -0.82
LINC00648-203ENST00000556923 GLMNQ92990 594 aa9.92□□□□□ -0.82
LINC00648-203ENST00000556923 TRERF1Q96PN7 1200 aa9.92□□□□□ -0.82
LINC00648-203ENST00000556923 UBAP2LQ14157 1087 aaKnown RBP9.91□□□□□ -0.82
LINC00648-203ENST00000556923 LYPD4Q6UWN0 246 aa9.91□□□□□ -0.82
LINC00648-203ENST00000556923 NIFKQ9BYG3 293 aaKnown RBP9.91□□□□□ -0.82
LINC00648-203ENST00000556923 ZNF358Q9NW07 568 aa9.91□□□□□ -0.82
LINC00648-203ENST00000556923 IGF1RP08069 1367 aa9.9□□□□□ -0.82
LINC00648-203ENST00000556923 A6NJR5 290 aa9.9□□□□□ -0.82
LINC00648-203ENST00000556923 CDK2AP1O14519 115 aa9.9□□□□□ -0.82
LINC00648-203ENST00000556923 CSB-PGBD3P0DP91 1061 aa9.9□□□□□ -0.82
LINC00648-203ENST00000556923 PGBD3Q8N328 593 aa9.9□□□□□ -0.82
LINC00648-203ENST00000556923 KIAA1024Q9UPX6 916 aa9.9□□□□□ -0.82
LINC00648-203ENST00000556923 BACH1O14867 736 aa9.89□□□□□ -0.83
LINC00648-203ENST00000556923 ATP4AP20648 1035 aa9.89□□□□□ -0.83
LINC00648-203ENST00000556923 CLDN10P78369 228 aa9.89□□□□□ -0.83
LINC00648-203ENST00000556923 LBRQ14739 615 aaKnown RBP9.89□□□□□ -0.83
LINC00648-203ENST00000556923 TRIM50Q86XT4 487 aa9.89□□□□□ -0.83
LINC00648-203ENST00000556923 CRISPLD1Q9H336 500 aa9.89□□□□□ -0.83
LINC00648-203ENST00000556923 ADAMTS8Q9UP79 889 aa9.89□□□□□ -0.83
LINC00648-203ENST00000556923 ZBTB7BO15156 539 aaPredicted RBP9.88□□□□□ -0.83
LINC00648-203ENST00000556923 ARHGEF15O94989 841 aa9.88□□□□□ -0.83
LINC00648-203ENST00000556923 CELA2BP08218 269 aaPredicted RBP9.87□□□□□ -0.83
LINC00648-203ENST00000556923 MX2P20592 715 aa9.87□□□□□ -0.83
LINC00648-203ENST00000556923 EPHA4P54764 986 aa9.87□□□□□ -0.83
LINC00648-203ENST00000556923 AIDAQ96BJ3 306 aa9.87□□□□□ -0.83
LINC00648-203ENST00000556923 CFHR5Q9BXR6 569 aa9.87□□□□□ -0.83
LINC00648-203ENST00000556923 SCHIP1Q9P0W5 487 aaPredicted RBP9.87□□□□□ -0.83
LINC00648-203ENST00000556923 EFHC2Q5JST6 749 aa9.86□□□□□ -0.83
LINC00648-203ENST00000556923 TPCN2Q8NHX9 752 aa9.86□□□□□ -0.83
LINC00648-203ENST00000556923 C1orf216Q8TAB5 229 aa9.86□□□□□ -0.83
LINC00648-203ENST00000556923 CABP1Q9NZU7 370 aa9.86□□□□□ -0.83
LINC00648-203ENST00000556923 MKRN1Q9UHC7 482 aaKnown RBP9.86□□□□□ -0.83
LINC00648-203ENST00000556923 ATP1A2P50993 1020 aa9.85□□□□□ -0.83
LINC00648-203ENST00000556923 FOXK2Q01167 660 aa9.85□□□□□ -0.83
LINC00648-203ENST00000556923 CCDC102BQ68D86 513 aa9.85□□□□□ -0.83
LINC00648-203ENST00000556923 TNS4Q8IZW8 715 aa9.85□□□□□ -0.83
LINC00648-203ENST00000556923 OGFOD1Q8N543 542 aa9.85□□□□□ -0.83
LINC00648-203ENST00000556923 DNAAF2Q9NVR5 837 aaKnown RBP9.85□□□□□ -0.83
LINC00648-203ENST00000556923 TFIP11Q9UBB9 837 aaKnown RBP9.85□□□□□ -0.83
LINC00648-203ENST00000556923 NBPF1Q3BBV0 1214 aa9.84□□□□□ -0.83
LINC00648-203ENST00000556923 ACDQ96AP0 544 aa9.84□□□□□ -0.83
LINC00648-203ENST00000556923 CALR3Q96L12 384 aaKnown RBP9.84□□□□□ -0.83
LINC00648-203ENST00000556923 NDFIP2Q9NV92 336 aa9.84□□□□□ -0.83
LINC00648-203ENST00000556923 PHF24Q9UPV7 400 aa9.84□□□□□ -0.83
LINC00648-203ENST00000556923 MAFBQ9Y5Q3 323 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms