RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 LRRC59Q96AG4 307 aaKnown RBP7.55□□□□□ -1.2
ATXN3-244ENST00000556898 HIRIP3Q9BW71 556 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-244ENST00000556898 PKD2L1Q9P0L9 805 aa7.55□□□□□ -1.2
ATXN3-244ENST00000556898 LRP6O75581 1613 aa7.55□□□□□ -1.2
ATXN3-244ENST00000556898 PLEKHG1Q9ULL1 1385 aa7.55□□□□□ -1.2
ATXN3-244ENST00000556898 PRAG1Q86YV5 1406 aa7.54□□□□□ -1.2
ATXN3-244ENST00000556898 ST8SIA5O15466 376 aa7.54□□□□□ -1.2
ATXN3-244ENST00000556898 HIC1Q14526 733 aa7.54□□□□□ -1.2
ATXN3-244ENST00000556898 CFAP70Q5T0N1 1121 aa7.54□□□□□ -1.2
ATXN3-244ENST00000556898 BRINP3Q76B58 766 aa7.54□□□□□ -1.2
ATXN3-244ENST00000556898 NGLY1Q96IV0 654 aa7.54□□□□□ -1.2
ATXN3-244ENST00000556898 SPSB2Q99619 263 aa7.54□□□□□ -1.2
ATXN3-244ENST00000556898 IFT172Q9UG01 1749 aa7.54□□□□□ -1.2
ATXN3-244ENST00000556898 PPLO60437 1756 aa7.54□□□□□ -1.2
ATXN3-244ENST00000556898 ZFYVE9O95405 1425 aa7.53□□□□□ -1.2
ATXN3-244ENST00000556898 MORN1Q5T089 497 aa7.53□□□□□ -1.2
ATXN3-244ENST00000556898 THAP11Q96EK4 314 aa7.53□□□□□ -1.2
ATXN3-244ENST00000556898 PHOX2BQ99453 314 aa7.53□□□□□ -1.2
ATXN3-244ENST00000556898 AMOTL2Q9Y2J4 779 aa7.53□□□□□ -1.2
ATXN3-244ENST00000556898 MYOM2P54296 1465 aa7.53□□□□□ -1.2
ATXN3-244ENST00000556898 RPGRIP1LQ68CZ1 1315 aa7.52□□□□□ -1.2
ATXN3-244ENST00000556898 XIRP1Q702N8 1843 aaKnown RBP7.52□□□□□ -1.2
ATXN3-244ENST00000556898 NRXN1Q9ULB1 1477 aa7.52□□□□□ -1.21
ATXN3-244ENST00000556898 PIK3R4Q99570 1358 aa7.52□□□□□ -1.21
ATXN3-244ENST00000556898 GPIHBP1Q8IV16 184 aa7.52□□□□□ -1.21
ATXN3-244ENST00000556898 FAM160A2Q8N612 972 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-244ENST00000556898 C8orf37Q96NL8 207 aa7.52□□□□□ -1.21
ATXN3-244ENST00000556898 AAASQ9NRG9 546 aa7.52□□□□□ -1.21
ATXN3-244ENST00000556898 FUT2Q10981 343 aa7.51□□□□□ -1.21
ATXN3-244ENST00000556898 FOXC1Q12948 553 aa7.51□□□□□ -1.21
ATXN3-244ENST00000556898 TMEM132EQ6IEE7 984 aa7.51□□□□□ -1.21
ATXN3-244ENST00000556898 CCDC125Q86Z20 511 aa7.51□□□□□ -1.21
ATXN3-244ENST00000556898 DAXXQ9UER7 740 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-244ENST00000556898 TRPM1Q7Z4N2 1603 aa7.51□□□□□ -1.21
ATXN3-244ENST00000556898 PIK3C2GO75747 1445 aa7.51□□□□□ -1.21
ATXN3-244ENST00000556898 NWD1Q149M9 1564 aa7.5□□□□□ -1.21
ATXN3-244ENST00000556898 RALGAPBQ86X10 1494 aa7.5□□□□□ -1.21
ATXN3-244ENST00000556898 SETD1AO15047 1707 aaKnown RBP7.5□□□□□ -1.21
ATXN3-244ENST00000556898 PHLPP1O60346 1717 aa7.5□□□□□ -1.21
ATXN3-244ENST00000556898 COL16A1Q07092 1604 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-244ENST00000556898 GNPATO15228 680 aa7.5□□□□□ -1.21
ATXN3-244ENST00000556898 DACH1Q9UI36 760 aa7.5□□□□□ -1.21
ATXN3-244ENST00000556898 ASXL1Q8IXJ9 1541 aa7.5□□□□□ -1.21
ATXN3-244ENST00000556898 ROCK2O75116 1388 aaKnown RBP7.49□□□□□ -1.21
ATXN3-244ENST00000556898 ATAD2Q6PL18 1390 aa7.49□□□□□ -1.21
ATXN3-244ENST00000556898 DDX11L8A8MPP1 907 aa7.49□□□□□ -1.21
ATXN3-244ENST00000556898 ADAMTS2O95450 1211 aa7.49□□□□□ -1.21
ATXN3-244ENST00000556898 HSPA5P11021 654 aaKnown RBP7.49□□□□□ -1.21
ATXN3-244ENST00000556898 RDH13Q8NBN7 331 aa7.49□□□□□ -1.21
ATXN3-244ENST00000556898 ZC3H15Q8WU90 426 aaKnown RBP7.49□□□□□ -1.21
ATXN3-244ENST00000556898 CARD11Q9BXL7 1154 aa7.49□□□□□ -1.21
ATXN3-244ENST00000556898 C14orf93Q9H972 538 aaKnown RBP7.49□□□□□ -1.21
ATXN3-244ENST00000556898 TRPC5Q9UL62 973 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-244ENST00000556898 SLC27A5Q9Y2P5 690 aa7.49□□□□□ -1.21
ATXN3-244ENST00000556898 NRXN3Q9Y4C0 1643 aa7.49□□□□□ -1.21
ATXN3-244ENST00000556898 KDM5AP29375 1690 aaKnown RBP7.48□□□□□ -1.21
ATXN3-244ENST00000556898 RGS12O14924 1447 aa7.48□□□□□ -1.21
ATXN3-244ENST00000556898 ADAMTS13Q76LX8 1427 aa7.48□□□□□ -1.21
ATXN3-244ENST00000556898 FNBP4Q8N3X1 1017 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-244ENST00000556898 PRDM9Q9NQV7 894 aa7.48□□□□□ -1.21
ATXN3-244ENST00000556898 USP21Q9UK80 565 aa7.48□□□□□ -1.21
ATXN3-244ENST00000556898 FCF1Q9Y324 198 aaKnown RBP7.48□□□□□ -1.21
ATXN3-244ENST00000556898 AHDC1Q5TGY3 1603 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-244ENST00000556898 METP08581 1390 aa7.47□□□□□ -1.21
ATXN3-244ENST00000556898 ADGRB1O14514 1584 aa7.47□□□□□ -1.21
ATXN3-244ENST00000556898 ATP6V1AP38606 617 aa7.47□□□□□ -1.21
ATXN3-244ENST00000556898 GCGRP47871 477 aa7.47□□□□□ -1.21
ATXN3-244ENST00000556898 LCE2AQ5TA79 106 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-244ENST00000556898 TOR4AQ9NXH8 423 aa7.47□□□□□ -1.21
ATXN3-244ENST00000556898 STK26Q9P289 416 aa7.47□□□□□ -1.21
ATXN3-244ENST00000556898 TRAK1Q9UPV9 953 aa7.47□□□□□ -1.21
ATXN3-244ENST00000556898 GPRASP1Q5JY77 1395 aa7.46□□□□□ -1.21
ATXN3-244ENST00000556898 USP47Q96K76 1375 aa7.46□□□□□ -1.21
ATXN3-244ENST00000556898 DCCP43146 1447 aa7.46□□□□□ -1.21
ATXN3-244ENST00000556898 C11orf95C9JLR9 678 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-244ENST00000556898 ZMYND10O75800 440 aa7.46□□□□□ -1.22
ATXN3-244ENST00000556898 RPIAP49247 311 aa7.46□□□□□ -1.22
ATXN3-244ENST00000556898 BRICD5Q6PL45 260 aa7.46□□□□□ -1.22
ATXN3-244ENST00000556898 DDX17Q92841 729 aaKnown RBP7.46□□□□□ -1.22
ATXN3-244ENST00000556898 SETBP1Q9Y6X0 1596 aa7.46□□□□□ -1.22
ATXN3-244ENST00000556898 PNPLA6Q8IY17 1366 aa7.46□□□□□ -1.22
ATXN3-244ENST00000556898 PTPRUQ92729 1446 aa7.45□□□□□ -1.22
ATXN3-244ENST00000556898 ST20-MTHFSA0A0A6YYL1 179 aa7.45□□□□□ -1.22
ATXN3-244ENST00000556898 EIF4G2P78344 907 aaKnown RBP eCLIP7.45□□□□□ -1.22
ATXN3-244ENST00000556898 RNF19BQ6ZMZ0 732 aa7.45□□□□□ -1.22
ATXN3-244ENST00000556898 KIAA1210Q9ULL0 1709 aa7.44□□□□□ -1.22
ATXN3-244ENST00000556898 FMNL1O95466 1100 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-244ENST00000556898 SAFB2Q14151 953 aaKnown RBP eCLIP7.44□□□□□ -1.22
ATXN3-244ENST00000556898 BARGINQ6ZT62 677 aa7.44□□□□□ -1.22
ATXN3-244ENST00000556898 SOS2Q07890 1332 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-244ENST00000556898 SHPRHQ149N8 1683 aa7.44□□□□□ -1.22
ATXN3-244ENST00000556898 PLEKHH1Q9ULM0 1364 aa7.44□□□□□ -1.22
ATXN3-244ENST00000556898 MST1RQ04912 1400 aa7.44□□□□□ -1.22
ATXN3-244ENST00000556898 YTHDC2Q9H6S0 1430 aaKnown RBP7.44□□□□□ -1.22
ATXN3-244ENST00000556898 DIP2AQ14689 1571 aa7.43□□□□□ -1.22
ATXN3-244ENST00000556898 LAMC1P11047 1609 aa7.43□□□□□ -1.22
ATXN3-244ENST00000556898 CD2BP2O95400 341 aaKnown RBP7.43□□□□□ -1.22
ATXN3-244ENST00000556898 AVPP01185 164 aa7.43□□□□□ -1.22
ATXN3-244ENST00000556898 TPRNQ4KMQ1 711 aa7.43□□□□□ -1.22
ATXN3-244ENST00000556898 WAPLQ7Z5K2 1190 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 213.2 ms