RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 PRIM1P49642 420 aaKnown RBP9.9□□□□□ -0.82
PCNX1-213ENST00000556846 SLC15A2Q16348 729 aa9.9□□□□□ -0.82
PCNX1-213ENST00000556846 KRTAP3-3Q9BYR6 98 aa9.9□□□□□ -0.82
PCNX1-213ENST00000556846 KRTAP3-2Q9BYR7 98 aa9.9□□□□□ -0.82
PCNX1-213ENST00000556846 PEAK1Q9H792 1746 aa9.9□□□□□ -0.83
PCNX1-213ENST00000556846 NSD3Q9BZ95 1437 aa9.9□□□□□ -0.83
PCNX1-213ENST00000556846 RTL1A6NKG5 1358 aa9.89□□□□□ -0.83
PCNX1-213ENST00000556846 LRP5O75197 1615 aa9.89□□□□□ -0.83
PCNX1-213ENST00000556846 CGNL1Q0VF96 1302 aa9.89□□□□□ -0.83
PCNX1-213ENST00000556846 HSPA5P11021 654 aaKnown RBP9.89□□□□□ -0.83
PCNX1-213ENST00000556846 USP54Q70EL1 1684 aa9.89□□□□□ -0.83
PCNX1-213ENST00000556846 LTN1O94822 1766 aa9.88□□□□□ -0.83
PCNX1-213ENST00000556846 TNNT2P45379 298 aaPredicted RBP9.88□□□□□ -0.83
PCNX1-213ENST00000556846 PDGFDQ9GZP0 370 aaPredicted RBP9.88□□□□□ -0.83
PCNX1-213ENST00000556846 EMILIN1Q9Y6C2 1016 aa9.88□□□□□ -0.83
PCNX1-213ENST00000556846 INSRP06213 1382 aa9.88□□□□□ -0.83
PCNX1-213ENST00000556846 FLT4P35916 1363 aa9.88□□□□□ -0.83
PCNX1-213ENST00000556846 SLC27A3Q5K4L6 730 aa9.87□□□□□ -0.83
PCNX1-213ENST00000556846 NUP188Q5SRE5 1749 aa9.87□□□□□ -0.83
PCNX1-213ENST00000556846 RREB1Q92766 1687 aa9.87□□□□□ -0.83
PCNX1-213ENST00000556846 MTFR1LQ9H019 292 aa9.86□□□□□ -0.83
PCNX1-213ENST00000556846 PANK3Q9H999 370 aa9.86□□□□□ -0.83
PCNX1-213ENST00000556846 KIF24Q5T7B8 1368 aa9.86□□□□□ -0.83
PCNX1-213ENST00000556846 WNK3Q9BYP7 1800 aa9.85□□□□□ -0.83
PCNX1-213ENST00000556846 KCNQ4P56696 695 aa9.85□□□□□ -0.83
PCNX1-213ENST00000556846 LRRC4BQ9NT99 713 aa9.85□□□□□ -0.83
PCNX1-213ENST00000556846 TFCP2L1Q9NZI6 479 aa9.85□□□□□ -0.83
PCNX1-213ENST00000556846 WASHC2AQ641Q2 1341 aa9.84□□□□□ -0.83
PCNX1-213ENST00000556846 PCDH11XQ9BZA7 1347 aa9.84□□□□□ -0.83
PCNX1-213ENST00000556846 PCDH11YQ9BZA8 1340 aa9.84□□□□□ -0.83
PCNX1-213ENST00000556846 MEGF6O75095 1541 aa9.84□□□□□ -0.83
PCNX1-213ENST00000556846 MPRIPQ6WCQ1 1025 aa9.84□□□□□ -0.83
PCNX1-213ENST00000556846 POLKQ9UBT6 870 aa9.84□□□□□ -0.83
PCNX1-213ENST00000556846 CCNL1Q9UK58 526 aaPredicted RBP9.84□□□□□ -0.83
PCNX1-213ENST00000556846 SPG7Q9UQ90 795 aa9.84□□□□□ -0.83
PCNX1-213ENST00000556846 SBF2Q86WG5 1849 aa9.84□□□□□ -0.83
PCNX1-213ENST00000556846 PYGBP11216 843 aa9.83□□□□□ -0.84
PCNX1-213ENST00000556846 ZNF827Q17R98 1081 aa9.83□□□□□ -0.84
PCNX1-213ENST00000556846 MORC1Q86VD1 984 aa9.83□□□□□ -0.84
PCNX1-213ENST00000556846 PDCD7Q8N8D1 485 aaKnown RBP9.83□□□□□ -0.84
PCNX1-213ENST00000556846 EYA1Q99502 592 aa9.83□□□□□ -0.84
PCNX1-213ENST00000556846 PCDHB8Q9UN66 801 aa9.83□□□□□ -0.84
PCNX1-213ENST00000556846 KNSTRNQ9Y448 316 aa9.83□□□□□ -0.84
PCNX1-213ENST00000556846 HMGB2P26583 209 aaKnown RBP9.82□□□□□ -0.84
PCNX1-213ENST00000556846 PTGER2P43116 358 aa9.82□□□□□ -0.84
PCNX1-213ENST00000556846 KLHL34Q8N239 644 aa9.82□□□□□ -0.84
PCNX1-213ENST00000556846 NHSQ6T4R5 1651 aa9.82□□□□□ -0.84
PCNX1-213ENST00000556846 RGPD3A6NKT7 1758 aaPredicted RBP9.82□□□□□ -0.84
PCNX1-213ENST00000556846 RGPD4Q7Z3J3 1758 aa9.82□□□□□ -0.84
PCNX1-213ENST00000556846 FAM208AQ9UK61 1670 aaKnown RBP9.81□□□□□ -0.84
PCNX1-213ENST00000556846 CYP27B1O15528 508 aa9.81□□□□□ -0.84
PCNX1-213ENST00000556846 POLD1P28340 1107 aa9.81□□□□□ -0.84
PCNX1-213ENST00000556846 SLC16A10Q8TF71 515 aa9.81□□□□□ -0.84
PCNX1-213ENST00000556846 ARXQ96QS3 562 aa9.81□□□□□ -0.84
PCNX1-213ENST00000556846 SYT17Q9BSW7 474 aa9.81□□□□□ -0.84
PCNX1-213ENST00000556846 FHDC1Q9C0D6 1143 aaPredicted RBP9.81□□□□□ -0.84
PCNX1-213ENST00000556846 YY1P25490 414 aa9.8□□□□□ -0.84
PCNX1-213ENST00000556846 EIF4A2Q14240 407 aaKnown RBP9.8□□□□□ -0.84
PCNX1-213ENST00000556846 DCAF8Q5TAQ9 597 aa9.8□□□□□ -0.84
PCNX1-213ENST00000556846 SMARCC1Q92922 1105 aaPredicted RBP9.8□□□□□ -0.84
PCNX1-213ENST00000556846 POTEB3A0JP26 581 aa9.79□□□□□ -0.84
PCNX1-213ENST00000556846 POTEBQ6S5H4 581 aa9.79□□□□□ -0.84
PCNX1-213ENST00000556846 IFNL2Q8IZJ0 200 aa9.79□□□□□ -0.84
PCNX1-213ENST00000556846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.79□□□□□ -0.84
PCNX1-213ENST00000556846 TMOD3Q9NYL9 352 aa9.79□□□□□ -0.84
PCNX1-213ENST00000556846 KIF20BQ96Q89 1820 aa9.79□□□□□ -0.84
PCNX1-213ENST00000556846 PNPLA7Q6ZV29 1317 aa9.79□□□□□ -0.84
PCNX1-213ENST00000556846 NSD2O96028 1365 aa9.78□□□□□ -0.84
PCNX1-213ENST00000556846 PALLDQ8WX93 1383 aa9.78□□□□□ -0.84
PCNX1-213ENST00000556846 EMP3P54852 163 aa9.78□□□□□ -0.84
PCNX1-213ENST00000556846 NKX1-1Q15270 411 aaPredicted RBP9.78□□□□□ -0.84
PCNX1-213ENST00000556846 PLEKHO1Q53GL0 409 aaPredicted RBP9.78□□□□□ -0.84
PCNX1-213ENST00000556846 PIGBQ92521 554 aa9.78□□□□□ -0.84
PCNX1-213ENST00000556846 BTAF1O14981 1849 aa9.77□□□□□ -0.84
PCNX1-213ENST00000556846 MYOM1P52179 1685 aa9.77□□□□□ -0.84
PCNX1-213ENST00000556846 PHKG2P15735 406 aa9.77□□□□□ -0.85
PCNX1-213ENST00000556846 CNGB1Q14028 1251 aaPredicted RBP9.77□□□□□ -0.85
PCNX1-213ENST00000556846 COL23A1Q86Y22 540 aaPredicted RBP9.77□□□□□ -0.85
PCNX1-213ENST00000556846 FLAD1Q8NFF5 587 aa9.77□□□□□ -0.85
PCNX1-213ENST00000556846 L3MBTL3Q96JM7 780 aaPredicted RBP9.77□□□□□ -0.85
PCNX1-213ENST00000556846 AK7Q96M32 723 aa9.77□□□□□ -0.85
PCNX1-213ENST00000556846 RGPD2P0DJD1 1756 aa9.77□□□□□ -0.85
PCNX1-213ENST00000556846 KAT6BQ8WYB5 2073 aa9.76□□□□□ -0.85
PCNX1-213ENST00000556846 HSP90AB1P08238 724 aaKnown RBP9.76□□□□□ -0.85
PCNX1-213ENST00000556846 GPR162Q16538 588 aa9.76□□□□□ -0.85
PCNX1-213ENST00000556846 C3orf67Q6ZVT6 689 aa9.76□□□□□ -0.85
PCNX1-213ENST00000556846 HS3ST6Q96QI5 342 aa9.76□□□□□ -0.85
PCNX1-213ENST00000556846 KIF7Q2M1P5 1343 aa9.76□□□□□ -0.85
PCNX1-213ENST00000556846 CASZ1Q86V15 1759 aa9.75□□□□□ -0.85
PCNX1-213ENST00000556846 PHF14O94880 888 aa9.75□□□□□ -0.85
PCNX1-213ENST00000556846 ATP6V1AP38606 617 aa9.75□□□□□ -0.85
PCNX1-213ENST00000556846 CABP4P57796 275 aa9.75□□□□□ -0.85
PCNX1-213ENST00000556846 AMOTQ4VCS5 1084 aa9.75□□□□□ -0.85
PCNX1-213ENST00000556846 C1orf141Q5JVX7 400 aa9.75□□□□□ -0.85
PCNX1-213ENST00000556846 CC2D1BQ5T0F9 858 aaKnown RBP9.75□□□□□ -0.85
PCNX1-213ENST00000556846 MSL1Q68DK7 614 aa9.75□□□□□ -0.85
PCNX1-213ENST00000556846 IGSF1Q8N6C5 1336 aa9.75□□□□□ -0.85
PCNX1-213ENST00000556846 DOT1LQ8TEK3 1739 aa9.74□□□□□ -0.85
PCNX1-213ENST00000556846 LOC102724428A0A0B4J2F2 783 aa9.74□□□□□ -0.85
PCNX1-213ENST00000556846 MTHFSP49914 203 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms