RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
FCF1-208ENST00000556814 DOLKQ9UPQ8 538 aa8.11□□□□□ -1.11
FCF1-208ENST00000556814 EMILIN1Q9Y6C2 1016 aa8.11□□□□□ -1.11
FCF1-208ENST00000556814 KRTAP19-1Q8IUB9 90 aa8.1□□□□□ -1.11
FCF1-208ENST00000556814 ESF1Q9H501 851 aaKnown RBP8.1□□□□□ -1.11
FCF1-208ENST00000556814 PCDHB11Q9Y5F2 797 aa8.1□□□□□ -1.11
FCF1-208ENST00000556814 USP17L5A8MUK1 530 aa8.09□□□□□ -1.11
FCF1-208ENST00000556814 PHF20L1A8MW92 1017 aa8.09□□□□□ -1.11
FCF1-208ENST00000556814 ERVH48-1M5A8F1 160 aa8.09□□□□□ -1.11
FCF1-208ENST00000556814 SPINT1O43278 529 aa8.09□□□□□ -1.11
FCF1-208ENST00000556814 USP4Q13107 963 aa8.09□□□□□ -1.11
FCF1-208ENST00000556814 PLEKHM2Q8IWE5 1019 aa8.09□□□□□ -1.11
FCF1-208ENST00000556814 BEND7Q8N7W2 519 aaPredicted RBP8.09□□□□□ -1.11
FCF1-208ENST00000556814 CCDC85AQ96PX6 553 aaPredicted RBP8.09□□□□□ -1.11
FCF1-208ENST00000556814 ARID3AQ99856 593 aa8.09□□□□□ -1.11
FCF1-208ENST00000556814 MAFBQ9Y5Q3 323 aaPredicted RBP8.09□□□□□ -1.11
FCF1-208ENST00000556814 MYCP01106 439 aaPredicted RBP8.08□□□□□ -1.12
FCF1-208ENST00000556814 LMOD1P29536 600 aaPredicted RBP8.08□□□□□ -1.12
FCF1-208ENST00000556814 EML3Q32P44 896 aa8.08□□□□□ -1.12
FCF1-208ENST00000556814 PPP1R26Q5T8A7 1209 aaPredicted RBP8.08□□□□□ -1.12
FCF1-208ENST00000556814 USP17L3A6NCW0 530 aa8.07□□□□□ -1.12
FCF1-208ENST00000556814 USP17L4A6NCW7 530 aa8.07□□□□□ -1.12
FCF1-208ENST00000556814 CFAP70Q5T0N1 1121 aa8.07□□□□□ -1.12
FCF1-208ENST00000556814 USP17L2Q6R6M4 530 aa8.07□□□□□ -1.12
FCF1-208ENST00000556814 USP17L1Q7RTZ2 530 aa8.07□□□□□ -1.12
FCF1-208ENST00000556814 AGBL1Q96MI9 1066 aa8.07□□□□□ -1.12
FCF1-208ENST00000556814 SNRPNP63162 240 aaKnown RBP8.06□□□□□ -1.12
FCF1-208ENST00000556814 NCOA4Q13772 614 aa8.06□□□□□ -1.12
FCF1-208ENST00000556814 OXLD1Q5BKU9 147 aa8.06□□□□□ -1.12
FCF1-208ENST00000556814 CC2D2BQ6DHV5 1058 aa8.06□□□□□ -1.12
FCF1-208ENST00000556814 NOD1Q9Y239 953 aa8.06□□□□□ -1.12
FCF1-208ENST00000556814 PPP1R15AO75807 674 aaPredicted RBP8.05□□□□□ -1.12
FCF1-208ENST00000556814 COL8A1P27658 744 aa8.05□□□□□ -1.12
FCF1-208ENST00000556814 ERVK-9P63128 1117 aa8.05□□□□□ -1.12
FCF1-208ENST00000556814 TSGA10IPQ3SY00 556 aa8.05□□□□□ -1.12
FCF1-208ENST00000556814 TRIM50Q86XT4 487 aa8.05□□□□□ -1.12
FCF1-208ENST00000556814 ZNF784Q8NCA9 323 aaPredicted RBP8.05□□□□□ -1.12
FCF1-208ENST00000556814 ACDQ96AP0 544 aa8.05□□□□□ -1.12
FCF1-208ENST00000556814 ATP5J2-PTCD1G3V325 749 aa8.04□□□□□ -1.12
FCF1-208ENST00000556814 GPR25O00155 361 aa8.04□□□□□ -1.12
FCF1-208ENST00000556814 RFX1P22670 979 aa8.04□□□□□ -1.12
FCF1-208ENST00000556814 Q6ZVU0 165 aa8.04□□□□□ -1.12
FCF1-208ENST00000556814 DEPDC4Q8N2C3 294 aa8.04□□□□□ -1.12
FCF1-208ENST00000556814 INSM2Q96T92 566 aaPredicted RBP8.04□□□□□ -1.12
FCF1-208ENST00000556814 CDCA7Q9BWT1 371 aaPredicted RBP8.04□□□□□ -1.12
FCF1-208ENST00000556814 VRTNQ9H8Y1 702 aa8.04□□□□□ -1.12
FCF1-208ENST00000556814 ENAMQ9NRM1 1142 aa8.04□□□□□ -1.12
FCF1-208ENST00000556814 TMPRSS4Q9NRS4 437 aa8.04□□□□□ -1.12
FCF1-208ENST00000556814 ATP1A2P50993 1020 aa8.03□□□□□ -1.12
FCF1-208ENST00000556814 NEDD1Q8NHV4 660 aa8.03□□□□□ -1.12
FCF1-208ENST00000556814 PBXIP1Q96AQ6 731 aa8.03□□□□□ -1.12
FCF1-208ENST00000556814 CYLDQ9NQC7 956 aa8.03□□□□□ -1.12
FCF1-208ENST00000556814 MKRN1Q9UHC7 482 aaKnown RBP8.03□□□□□ -1.12
FCF1-208ENST00000556814 IGF1RP08069 1367 aa8.02□□□□□ -1.13
FCF1-208ENST00000556814 BCRP11274 1271 aa8.02□□□□□ -1.13
FCF1-208ENST00000556814 ACIN1Q9UKV3 1341 aaKnown RBP8.02□□□□□ -1.13
FCF1-208ENST00000556814 LILRA1O75019 489 aa8.01□□□□□ -1.13
FCF1-208ENST00000556814 LARP1Q6PKG0 1096 aaKnown RBP8.01□□□□□ -1.13
FCF1-208ENST00000556814 CYP2U1Q7Z449 544 aa8.01□□□□□ -1.13
FCF1-208ENST00000556814 SCTRP47872 440 aa8□□□□□ -1.13
FCF1-208ENST00000556814 KANK4Q5T7N3 995 aaPredicted RBP8□□□□□ -1.13
FCF1-208ENST00000556814 RNF217Q8TC41 542 aa8□□□□□ -1.13
FCF1-208ENST00000556814 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.99□□□□□ -1.13
FCF1-208ENST00000556814 RASA1P20936 1047 aa7.99□□□□□ -1.13
FCF1-208ENST00000556814 GTF2IP78347 998 aa7.99□□□□□ -1.13
FCF1-208ENST00000556814 SRPK2P78362 688 aaKnown RBP7.99□□□□□ -1.13
FCF1-208ENST00000556814 RELBQ01201 579 aa7.99□□□□□ -1.13
FCF1-208ENST00000556814 FOXD4L6Q3SYB3 417 aaPredicted RBP7.99□□□□□ -1.13
FCF1-208ENST00000556814 FOXD4L3Q6VB84 417 aaPredicted RBP7.99□□□□□ -1.13
FCF1-208ENST00000556814 OSBPL3Q9H4L5 887 aa7.99□□□□□ -1.13
FCF1-208ENST00000556814 RBM19Q9Y4C8 960 aaKnown RBP7.99□□□□□ -1.13
FCF1-208ENST00000556814 FAM196BA6NMK8 535 aa7.98□□□□□ -1.13
FCF1-208ENST00000556814 GNRH1P01148 92 aa7.98□□□□□ -1.13
FCF1-208ENST00000556814 ADH1AP07327 375 aa7.98□□□□□ -1.13
FCF1-208ENST00000556814 PSME1Q06323 249 aa7.98□□□□□ -1.13
FCF1-208ENST00000556814 PODNQ7Z5L7 613 aa7.98□□□□□ -1.13
FCF1-208ENST00000556814 LARGE2Q8N3Y3 721 aa7.98□□□□□ -1.13
FCF1-208ENST00000556814 OGFOD1Q8N543 542 aa7.98□□□□□ -1.13
FCF1-208ENST00000556814 ZNF395Q9H8N7 513 aaPredicted RBP7.98□□□□□ -1.13
FCF1-208ENST00000556814 DNAAF2Q9NVR5 837 aaKnown RBP7.98□□□□□ -1.13
FCF1-208ENST00000556814 ATG7O95352 703 aa7.97□□□□□ -1.13
FCF1-208ENST00000556814 ADD1P35611 737 aaKnown RBP7.97□□□□□ -1.13
FCF1-208ENST00000556814 MBIPQ9NS73 344 aa7.97□□□□□ -1.13
FCF1-208ENST00000556814 PCDHGA11Q9Y5H2 935 aa7.97□□□□□ -1.13
FCF1-208ENST00000556814 BTBD11A6QL63 1104 aa7.96□□□□□ -1.14
FCF1-208ENST00000556814 CDCA8Q53HL2 280 aa7.96□□□□□ -1.14
FCF1-208ENST00000556814 ESCO1Q5FWF5 840 aa7.96□□□□□ -1.14
FCF1-208ENST00000556814 USP17L15C9J2P7 530 aa7.95□□□□□ -1.14
FCF1-208ENST00000556814 USP17L10C9JJH3 530 aa7.95□□□□□ -1.14
FCF1-208ENST00000556814 USP17L13C9JLJ4 530 aa7.95□□□□□ -1.14
FCF1-208ENST00000556814 USP17L12C9JPN9 530 aa7.95□□□□□ -1.14
FCF1-208ENST00000556814 USP17L11C9JVI0 530 aa7.95□□□□□ -1.14
FCF1-208ENST00000556814 USP17L21D6R901 530 aa7.95□□□□□ -1.14
FCF1-208ENST00000556814 USP17L18D6R9N7 530 aa7.95□□□□□ -1.14
FCF1-208ENST00000556814 USP17L22D6RA61 530 aa7.95□□□□□ -1.14
FCF1-208ENST00000556814 USP17L17D6RBQ6 530 aa7.95□□□□□ -1.14
FCF1-208ENST00000556814 USP17L19D6RCP7 530 aa7.95□□□□□ -1.14
FCF1-208ENST00000556814 USP17L20D6RJB6 530 aa7.95□□□□□ -1.14
FCF1-208ENST00000556814 PTGIRP43119 386 aa7.95□□□□□ -1.14
FCF1-208ENST00000556814 CLDN10P78369 228 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms