RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 LOC102724428A0A0B4J2F2 783 aa8.64□□□□□ -1.03
LGMN-213ENST00000556790 SIK1P57059 783 aa8.64□□□□□ -1.03
LGMN-213ENST00000556790 COL3A1P02461 1466 aaPredicted RBP8.64□□□□□ -1.03
LGMN-213ENST00000556790 SCN11AQ9UI33 1791 aa8.63□□□□□ -1.03
LGMN-213ENST00000556790 MYH14Q7Z406 1995 aaKnown RBP8.63□□□□□ -1.03
LGMN-213ENST00000556790 PTCD1O75127 700 aaKnown RBP8.63□□□□□ -1.03
LGMN-213ENST00000556790 YY1P25490 414 aa8.63□□□□□ -1.03
LGMN-213ENST00000556790 ATP6V1AP38606 617 aa8.63□□□□□ -1.03
LGMN-213ENST00000556790 NFATC2IPQ8NCF5 419 aa8.63□□□□□ -1.03
LGMN-213ENST00000556790 AK7Q96M32 723 aa8.63□□□□□ -1.03
LGMN-213ENST00000556790 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.62□□□□□ -1.03
LGMN-213ENST00000556790 U2SURPO15042 1029 aaKnown RBP8.62□□□□□ -1.03
LGMN-213ENST00000556790 GNPATO15228 680 aa8.62□□□□□ -1.03
LGMN-213ENST00000556790 CABP4P57796 275 aa8.62□□□□□ -1.03
LGMN-213ENST00000556790 SLC39A6Q13433 755 aa8.62□□□□□ -1.03
LGMN-213ENST00000556790 MTHFSDQ2M296 383 aaKnown RBP8.62□□□□□ -1.03
LGMN-213ENST00000556790 PLEKHO1Q53GL0 409 aaPredicted RBP8.62□□□□□ -1.03
LGMN-213ENST00000556790 COL5A3P25940 1745 aaPredicted RBP8.62□□□□□ -1.03
LGMN-213ENST00000556790 TJP1Q07157 1748 aa8.62□□□□□ -1.03
LGMN-213ENST00000556790 KDRP35968 1356 aa8.61□□□□□ -1.03
LGMN-213ENST00000556790 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.61□□□□□ -1.03
LGMN-213ENST00000556790 C4AP0C0L4 1744 aa8.6□□□□□ -1.03
LGMN-213ENST00000556790 DIAPH1O60610 1272 aaKnown RBP8.6□□□□□ -1.03
LGMN-213ENST00000556790 YBX3P16989 372 aaKnown RBP eCLIP8.6□□□□□ -1.03
LGMN-213ENST00000556790 POLD1P28340 1107 aa8.6□□□□□ -1.03
LGMN-213ENST00000556790 MAPK8IP2Q13387 824 aaPredicted RBP8.6□□□□□ -1.03
LGMN-213ENST00000556790 C1orf141Q5JVX7 400 aa8.6□□□□□ -1.03
LGMN-213ENST00000556790 SMARCC1Q92922 1105 aaPredicted RBP8.6□□□□□ -1.03
LGMN-213ENST00000556790 ERVV-2B6SEH9 535 aa8.59□□□□□ -1.03
LGMN-213ENST00000556790 GPR162Q16538 588 aa8.59□□□□□ -1.03
LGMN-213ENST00000556790 SLC16A10Q8TF71 515 aa8.59□□□□□ -1.03
LGMN-213ENST00000556790 DCAF5Q96JK2 942 aa8.59□□□□□ -1.03
LGMN-213ENST00000556790 SRP68Q9UHB9 627 aaKnown RBP8.59□□□□□ -1.03
LGMN-213ENST00000556790 N4BP2Q86UW6 1770 aaPredicted RBP8.58□□□□□ -1.04
LGMN-213ENST00000556790 RNMTO43148 476 aaKnown RBP8.58□□□□□ -1.04
LGMN-213ENST00000556790 PPP2R1AP30153 589 aa8.58□□□□□ -1.04
LGMN-213ENST00000556790 AMOTQ4VCS5 1084 aa8.58□□□□□ -1.04
LGMN-213ENST00000556790 DNAJC10Q8IXB1 793 aa8.58□□□□□ -1.04
LGMN-213ENST00000556790 PHACTR3Q96KR7 559 aa8.58□□□□□ -1.04
LGMN-213ENST00000556790 CHD4Q14839 1912 aa8.57□□□□□ -1.04
LGMN-213ENST00000556790 KCNQ3O43525 872 aa8.57□□□□□ -1.04
LGMN-213ENST00000556790 AKAP4Q5JQC9 854 aa8.57□□□□□ -1.04
LGMN-213ENST00000556790 ARHGEF1Q92888 912 aaKnown RBP8.57□□□□□ -1.04
LGMN-213ENST00000556790 SLC52A2Q9HAB3 445 aa8.57□□□□□ -1.04
LGMN-213ENST00000556790 KCPQ6ZWJ8 1503 aa8.57□□□□□ -1.04
LGMN-213ENST00000556790 CICQ96RK0 1608 aaPredicted RBP8.57□□□□□ -1.04
LGMN-213ENST00000556790 DCAF8L1A6NGE4 600 aa8.56□□□□□ -1.04
LGMN-213ENST00000556790 HSP90AB1P08238 724 aaKnown RBP8.56□□□□□ -1.04
LGMN-213ENST00000556790 MMP10P09238 476 aa8.56□□□□□ -1.04
LGMN-213ENST00000556790 PRKAR2BP31323 418 aa8.56□□□□□ -1.04
LGMN-213ENST00000556790 CRKLP46109 303 aaKnown RBP8.56□□□□□ -1.04
LGMN-213ENST00000556790 DCTN1Q14203 1278 aa8.56□□□□□ -1.04
LGMN-213ENST00000556790 IL17REQ8NFR9 667 aa8.56□□□□□ -1.04
LGMN-213ENST00000556790 KIAA1551Q9HCM1 1747 aa8.56□□□□□ -1.04
LGMN-213ENST00000556790 ADAMTS7Q9UKP4 1686 aa8.56□□□□□ -1.04
LGMN-213ENST00000556790 SIPA1L3O60292 1781 aaPredicted RBP8.56□□□□□ -1.04
LGMN-213ENST00000556790 SSFA2P28290 1259 aa8.55□□□□□ -1.04
LGMN-213ENST00000556790 PIP4K2AP48426 406 aaPredicted RBP8.55□□□□□ -1.04
LGMN-213ENST00000556790 TRAPPC3LQ5T215 181 aa8.55□□□□□ -1.04
LGMN-213ENST00000556790 INTS5Q6P9B9 1019 aaKnown RBP8.55□□□□□ -1.04
LGMN-213ENST00000556790 RSPH6AQ9H0K4 717 aa8.55□□□□□ -1.04
LGMN-213ENST00000556790 RTCBQ9Y3I0 505 aaKnown RBP8.55□□□□□ -1.04
LGMN-213ENST00000556790 MAP3K5Q99683 1374 aa8.55□□□□□ -1.04
LGMN-213ENST00000556790 MRC1P22897 1456 aa8.55□□□□□ -1.04
LGMN-213ENST00000556790 UBR2Q8IWV8 1755 aa8.54□□□□□ -1.04
LGMN-213ENST00000556790 ZNF831Q5JPB2 1677 aa8.54□□□□□ -1.04
LGMN-213ENST00000556790 NPC1L1Q9UHC9 1359 aa8.54□□□□□ -1.04
LGMN-213ENST00000556790 PRAMEF22A3QJZ6 481 aa8.54□□□□□ -1.04
LGMN-213ENST00000556790 RPS6KA4O75676 772 aa8.54□□□□□ -1.04
LGMN-213ENST00000556790 U2AF1L5P0DN76 240 aaPredicted RBP8.54□□□□□ -1.04
LGMN-213ENST00000556790 GYS1P13807 737 aa8.54□□□□□ -1.04
LGMN-213ENST00000556790 U2AF1Q01081 240 aaKnown RBP eCLIP8.54□□□□□ -1.04
LGMN-213ENST00000556790 FKBP8Q14318 412 aa8.54□□□□□ -1.04
LGMN-213ENST00000556790 MCM10Q7L590 875 aa8.54□□□□□ -1.04
LGMN-213ENST00000556790 ZNF784Q8NCA9 323 aaPredicted RBP8.54□□□□□ -1.04
LGMN-213ENST00000556790 ZBTB1Q9Y2K1 713 aa8.54□□□□□ -1.04
LGMN-213ENST00000556790 DLG5Q8TDM6 1919 aa8.53□□□□□ -1.04
LGMN-213ENST00000556790 A0A0G2JLW4 131 aa8.53□□□□□ -1.04
LGMN-213ENST00000556790 RFC4P35249 363 aa8.53□□□□□ -1.04
LGMN-213ENST00000556790 DDR1Q08345 913 aa8.53□□□□□ -1.04
LGMN-213ENST00000556790 DDX10Q13206 875 aaKnown RBP8.53□□□□□ -1.04
LGMN-213ENST00000556790 CCDC24Q8N4L8 307 aa8.53□□□□□ -1.04
LGMN-213ENST00000556790 FLAD1Q8NFF5 587 aa8.53□□□□□ -1.04
LGMN-213ENST00000556790 CNTNAP4Q9C0A0 1308 aa8.53□□□□□ -1.04
LGMN-213ENST00000556790 CEP350Q5VT06 3117 aa8.52□□□□□ -1.05
LGMN-213ENST00000556790 CYP19A1P11511 503 aaPredicted RBP8.52□□□□□ -1.05
LGMN-213ENST00000556790 CANXP27824 592 aaKnown RBP8.52□□□□□ -1.05
LGMN-213ENST00000556790 USPL1Q5W0Q7 1092 aa8.52□□□□□ -1.05
LGMN-213ENST00000556790 ZNF526Q8TF50 670 aaPredicted RBP8.52□□□□□ -1.05
LGMN-213ENST00000556790 ZNF496Q96IT1 587 aaPredicted RBP8.52□□□□□ -1.05
LGMN-213ENST00000556790 THUMPD2Q9BTF0 503 aaKnown RBP8.52□□□□□ -1.05
LGMN-213ENST00000556790 MIS18AQ9NYP9 233 aa8.52□□□□□ -1.05
LGMN-213ENST00000556790 ZNF330Q9Y3S2 320 aaPredicted RBP8.52□□□□□ -1.05
LGMN-213ENST00000556790 AFDNP55196 1824 aaKnown RBP8.52□□□□□ -1.05
LGMN-213ENST00000556790 PXDNLA1KZ92 1463 aa8.51□□□□□ -1.05
LGMN-213ENST00000556790 SENP3-EIF4A1A0A087X0R7 540 aa8.51□□□□□ -1.05
LGMN-213ENST00000556790 GNAT3A8MTJ3 354 aa8.51□□□□□ -1.05
LGMN-213ENST00000556790 RC3H1Q5TC82 1133 aaKnown RBP8.51□□□□□ -1.05
LGMN-213ENST00000556790 BCL2L12Q9HB09 334 aa8.51□□□□□ -1.05
LGMN-213ENST00000556790 CCDC87Q9NVE4 849 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms