RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 NDUFB9Q9Y6M9 179 aa9.27□□□□□ -0.93
PRPF39-210ENST00000556718 SNRPNP63162 240 aaKnown RBP9.26□□□□□ -0.93
PRPF39-210ENST00000556718 C1orf229Q6ZS94 237 aaPredicted RBP9.26□□□□□ -0.93
PRPF39-210ENST00000556718 PODNQ7Z5L7 613 aa9.26□□□□□ -0.93
PRPF39-210ENST00000556718 BANK1Q8NDB2 785 aa9.26□□□□□ -0.93
PRPF39-210ENST00000556718 OXCT2Q9BYC2 517 aaPredicted RBP9.26□□□□□ -0.93
PRPF39-210ENST00000556718 CEP126Q9P2H0 1117 aa9.26□□□□□ -0.93
PRPF39-210ENST00000556718 SHISA8B8ZZ34 492 aa9.25□□□□□ -0.93
PRPF39-210ENST00000556718 STAU1O95793 577 aaKnown RBP9.25□□□□□ -0.93
PRPF39-210ENST00000556718 PROCP04070 461 aa9.25□□□□□ -0.93
PRPF39-210ENST00000556718 UBAP2LQ14157 1087 aaKnown RBP9.25□□□□□ -0.93
PRPF39-210ENST00000556718 TSGA10IPQ3SY00 556 aa9.25□□□□□ -0.93
PRPF39-210ENST00000556718 ZSCAN10Q96SZ4 725 aaPredicted RBP9.25□□□□□ -0.93
PRPF39-210ENST00000556718 FHDC1Q9C0D6 1143 aaPredicted RBP9.25□□□□□ -0.93
PRPF39-210ENST00000556718 NSFL1CQ9UNZ2 370 aaKnown RBP9.25□□□□□ -0.93
PRPF39-210ENST00000556718 KLRG1Q96E93 195 aa9.24□□□□□ -0.93
PRPF39-210ENST00000556718 XAGE2Q96GT9 111 aa9.24□□□□□ -0.93
PRPF39-210ENST00000556718 CFHR5Q9BXR6 569 aa9.24□□□□□ -0.93
PRPF39-210ENST00000556718 LRRC4BQ9NT99 713 aa9.24□□□□□ -0.93
PRPF39-210ENST00000556718 MAP2K3P46734 347 aa9.23□□□□□ -0.93
PRPF39-210ENST00000556718 C4orf17Q53FE4 359 aa9.23□□□□□ -0.93
PRPF39-210ENST00000556718 ZNF592Q92610 1267 aa9.23□□□□□ -0.93
PRPF39-210ENST00000556718 RUBCNLQ9H714 662 aa9.23□□□□□ -0.93
PRPF39-210ENST00000556718 A0A1B0GTH6 734 aa9.22□□□□□ -0.93
PRPF39-210ENST00000556718 SOCS7O14512 581 aa9.22□□□□□ -0.93
PRPF39-210ENST00000556718 ADAM23O75077 832 aa9.22□□□□□ -0.93
PRPF39-210ENST00000556718 MYCP01106 439 aaPredicted RBP9.22□□□□□ -0.93
PRPF39-210ENST00000556718 BRPF1P55201 1214 aaPredicted RBP9.22□□□□□ -0.93
PRPF39-210ENST00000556718 GALNT6Q8NCL4 622 aa9.21□□□□□ -0.94
PRPF39-210ENST00000556718 MSX1P28360 303 aa9.2□□□□□ -0.94
PRPF39-210ENST00000556718 TMEM214Q6NUQ4 689 aaKnown RBP9.2□□□□□ -0.94
PRPF39-210ENST00000556718 KRBA1A5PL33 1030 aa9.19□□□□□ -0.94
PRPF39-210ENST00000556718 C2CD2LO14523 706 aa9.19□□□□□ -0.94
PRPF39-210ENST00000556718 GNASQ5JWF2 1037 aa9.19□□□□□ -0.94
PRPF39-210ENST00000556718 ETNK1Q9HBU6 452 aa9.19□□□□□ -0.94
PRPF39-210ENST00000556718 TBC1D2BQ9UPU7 963 aa9.19□□□□□ -0.94
PRPF39-210ENST00000556718 COL8A1P27658 744 aa9.18□□□□□ -0.94
PRPF39-210ENST00000556718 PHTF2Q8N3S3 785 aa9.18□□□□□ -0.94
PRPF39-210ENST00000556718 EDARADDQ8WWZ3 215 aa9.18□□□□□ -0.94
PRPF39-210ENST00000556718 ABHD17AQ96GS6 310 aa9.18□□□□□ -0.94
PRPF39-210ENST00000556718 PHF24Q9UPV7 400 aa9.18□□□□□ -0.94
PRPF39-210ENST00000556718 BNIP3LO60238 219 aa9.17□□□□□ -0.94
PRPF39-210ENST00000556718 HOXB4P17483 251 aaPredicted RBP9.17□□□□□ -0.94
PRPF39-210ENST00000556718 CTBSQ01459 385 aa9.17□□□□□ -0.94
PRPF39-210ENST00000556718 NDFIP2Q9NV92 336 aa9.17□□□□□ -0.94
PRPF39-210ENST00000556718 CSB-PGBD3P0DP91 1061 aa9.16□□□□□ -0.94
PRPF39-210ENST00000556718 PGBD3Q8N328 593 aa9.16□□□□□ -0.94
PRPF39-210ENST00000556718 RRAGCQ9HB90 399 aa9.16□□□□□ -0.94
PRPF39-210ENST00000556718 GDF2Q9UK05 429 aaPredicted RBP9.16□□□□□ -0.94
PRPF39-210ENST00000556718 MKL2Q9ULH7 1088 aa9.16□□□□□ -0.94
PRPF39-210ENST00000556718 DOLKQ9UPQ8 538 aa9.16□□□□□ -0.94
PRPF39-210ENST00000556718 GTF2E1P29083 439 aaPredicted RBP9.15□□□□□ -0.94
PRPF39-210ENST00000556718 IRF5Q13568 498 aa9.15□□□□□ -0.94
PRPF39-210ENST00000556718 LBRQ14739 615 aaKnown RBP9.15□□□□□ -0.94
PRPF39-210ENST00000556718 ESCO1Q5FWF5 840 aa9.15□□□□□ -0.94
PRPF39-210ENST00000556718 RHBDD1Q8TEB9 315 aa9.15□□□□□ -0.94
PRPF39-210ENST00000556718 SUV39H2Q9H5I1 410 aa9.15□□□□□ -0.94
PRPF39-210ENST00000556718 ATXN7L1Q9ULK2 861 aaPredicted RBP9.15□□□□□ -0.94
PRPF39-210ENST00000556718 APBB1O00213 710 aa9.14□□□□□ -0.95
PRPF39-210ENST00000556718 BMP4P12644 408 aa9.14□□□□□ -0.95
PRPF39-210ENST00000556718 FGFR3P22607 806 aa9.14□□□□□ -0.95
PRPF39-210ENST00000556718 TLR1Q15399 786 aa9.14□□□□□ -0.95
PRPF39-210ENST00000556718 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
PRPF39-210ENST00000556718 EFHC2Q5JST6 749 aa9.14□□□□□ -0.95
PRPF39-210ENST00000556718 XP32Q5T750 250 aa9.14□□□□□ -0.95
PRPF39-210ENST00000556718 PPARGC1BQ86YN6 1023 aaKnown RBP9.14□□□□□ -0.95
PRPF39-210ENST00000556718 GGA1Q9UJY5 639 aa9.14□□□□□ -0.95
PRPF39-210ENST00000556718 PLA2G4AP47712 749 aa9.13□□□□□ -0.95
PRPF39-210ENST00000556718 USP4Q13107 963 aa9.13□□□□□ -0.95
PRPF39-210ENST00000556718 LINC00114Q6XXX2 140 aa9.13□□□□□ -0.95
PRPF39-210ENST00000556718 GOLGA6L1Q8N7Z2 621 aa9.13□□□□□ -0.95
PRPF39-210ENST00000556718 BAG6P46379 1132 aa9.12□□□□□ -0.95
PRPF39-210ENST00000556718 SCNN1DP51172 638 aa9.12□□□□□ -0.95
PRPF39-210ENST00000556718 RNF135Q8IUD6 432 aa9.12□□□□□ -0.95
PRPF39-210ENST00000556718 CRISPLD1Q9H336 500 aa9.12□□□□□ -0.95
PRPF39-210ENST00000556718 DNAAF2Q9NVR5 837 aaKnown RBP9.12□□□□□ -0.95
PRPF39-210ENST00000556718 EIF4G2P78344 907 aaKnown RBP eCLIP9.11□□□□□ -0.95
PRPF39-210ENST00000556718 SLFNL1Q499Z3 407 aa9.11□□□□□ -0.95
PRPF39-210ENST00000556718 SLCO4C1Q6ZQN7 724 aa9.11□□□□□ -0.95
PRPF39-210ENST00000556718 CHIC2Q9UKJ5 165 aa9.11□□□□□ -0.95
PRPF39-210ENST00000556718 HCN2Q9UL51 889 aa9.11□□□□□ -0.95
PRPF39-210ENST00000556718 ATP4AP20648 1035 aa9.1□□□□□ -0.95
PRPF39-210ENST00000556718 AMPD1P23109 780 aa9.1□□□□□ -0.95
PRPF39-210ENST00000556718 GRIN2CQ14957 1233 aa9.1□□□□□ -0.95
PRPF39-210ENST00000556718 ZCCHC2Q9C0B9 1178 aaKnown RBP9.1□□□□□ -0.95
PRPF39-210ENST00000556718 K7ELQ4 463 aaPredicted RBP9.09□□□□□ -0.95
PRPF39-210ENST00000556718 GDF10P55107 478 aa9.09□□□□□ -0.95
PRPF39-210ENST00000556718 VAC14Q08AM6 782 aa9.09□□□□□ -0.95
PRPF39-210ENST00000556718 TBC1D9Q6ZT07 1266 aa9.09□□□□□ -0.95
PRPF39-210ENST00000556718 BTBD6Q96KE9 485 aa9.09□□□□□ -0.95
PRPF39-210ENST00000556718 NEURL1BA8MQ27 555 aa9.08□□□□□ -0.96
PRPF39-210ENST00000556718 INHAP05111 366 aa9.08□□□□□ -0.96
PRPF39-210ENST00000556718 FURINP09958 794 aa9.08□□□□□ -0.96
PRPF39-210ENST00000556718 EPXP11678 715 aa9.08□□□□□ -0.96
PRPF39-210ENST00000556718 PCDHGC4Q9Y5F7 938 aa9.07□□□□□ -0.96
PRPF39-210ENST00000556718 ARAFP10398 606 aa9.06□□□□□ -0.96
PRPF39-210ENST00000556718 AIDAQ96BJ3 306 aa9.06□□□□□ -0.96
PRPF39-210ENST00000556718 KLF15Q9UIH9 416 aa9.06□□□□□ -0.96
PRPF39-210ENST00000556718 USP3Q9Y6I4 520 aa9.06□□□□□ -0.96
PRPF39-210ENST00000556718 DGKGP49619 791 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms