RNA–Protein interactions for RNA: ENST00000556705.5

SRP54-AS1-204, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 2 BASIC

Gene SRP54-AS1, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-204ENST00000556705 CABP4P57796 275 aa17.82■□□□□ 0.44
SRP54-AS1-204ENST00000556705 MTHFSDQ2M296 383 aaKnown RBP17.82■□□□□ 0.44
SRP54-AS1-204ENST00000556705 AKAP4Q5JQC9 854 aa17.82■□□□□ 0.44
SRP54-AS1-204ENST00000556705 COL23A1Q86Y22 540 aaPredicted RBP17.82■□□□□ 0.44
SRP54-AS1-204ENST00000556705 SLC16A10Q8TF71 515 aa17.82■□□□□ 0.44
SRP54-AS1-204ENST00000556705 UBR3Q6ZT12 1888 aa17.82■□□□□ 0.44
SRP54-AS1-204ENST00000556705 NFATC2IPQ8NCF5 419 aa17.81■□□□□ 0.44
SRP54-AS1-204ENST00000556705 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
SRP54-AS1-204ENST00000556705 LGR6Q9HBX8 967 aa17.81■□□□□ 0.44
SRP54-AS1-204ENST00000556705 ATP6V1AP38606 617 aa17.8■□□□□ 0.44
SRP54-AS1-204ENST00000556705 ITPK1Q13572 414 aa17.8■□□□□ 0.44
SRP54-AS1-204ENST00000556705 LINC00116Q8NCU8 138 aa17.8■□□□□ 0.44
SRP54-AS1-204ENST00000556705 HMGB2P26583 209 aaKnown RBP17.79■□□□□ 0.44
SRP54-AS1-204ENST00000556705 AMIGO3Q86WK7 504 aa17.79■□□□□ 0.44
SRP54-AS1-204ENST00000556705 SLC4A9Q96Q91 983 aa17.79■□□□□ 0.44
SRP54-AS1-204ENST00000556705 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
SRP54-AS1-204ENST00000556705 ZNF831Q5JPB2 1677 aa17.78■□□□□ 0.44
SRP54-AS1-204ENST00000556705 RNMTO43148 476 aaKnown RBP17.78■□□□□ 0.44
SRP54-AS1-204ENST00000556705 SMIM5Q71RC9 77 aa17.78■□□□□ 0.44
SRP54-AS1-204ENST00000556705 AK7Q96M32 723 aa17.78■□□□□ 0.44
SRP54-AS1-204ENST00000556705 DDX10Q13206 875 aaKnown RBP17.77■□□□□ 0.44
SRP54-AS1-204ENST00000556705 ARXQ96QS3 562 aa17.77■□□□□ 0.44
SRP54-AS1-204ENST00000556705 ADAMTS7Q9UKP4 1686 aa17.77■□□□□ 0.43
SRP54-AS1-204ENST00000556705 COL5A3P25940 1745 aaPredicted RBP17.76■□□□□ 0.43
SRP54-AS1-204ENST00000556705 FHDC1Q9C0D6 1143 aaPredicted RBP17.76■□□□□ 0.43
SRP54-AS1-204ENST00000556705 SLC52A2Q9HAB3 445 aa17.76■□□□□ 0.43
SRP54-AS1-204ENST00000556705 NUDCQ9Y266 331 aa17.76■□□□□ 0.43
SRP54-AS1-204ENST00000556705 MYH14Q7Z406 1995 aaKnown RBP17.76■□□□□ 0.43
SRP54-AS1-204ENST00000556705 FLAD1Q8NFF5 587 aa17.75■□□□□ 0.43
SRP54-AS1-204ENST00000556705 PHACTR3Q96KR7 559 aa17.75■□□□□ 0.43
SRP54-AS1-204ENST00000556705 RSPH6AQ9H0K4 717 aa17.75■□□□□ 0.43
SRP54-AS1-204ENST00000556705 PTCD1O75127 700 aaKnown RBP17.74■□□□□ 0.43
SRP54-AS1-204ENST00000556705 PHF14O94880 888 aa17.74■□□□□ 0.43
SRP54-AS1-204ENST00000556705 PRKAR2BP31323 418 aa17.74■□□□□ 0.43
SRP54-AS1-204ENST00000556705 U2AF1L5P0DN76 240 aaPredicted RBP17.73■□□□□ 0.43
SRP54-AS1-204ENST00000556705 U2AF1Q01081 240 aaKnown RBP eCLIP17.73■□□□□ 0.432e-6■□□□□ 8.5
SRP54-AS1-204ENST00000556705 MSL1Q68DK7 614 aa17.73■□□□□ 0.43
SRP54-AS1-204ENST00000556705 SYT17Q9BSW7 474 aa17.73■□□□□ 0.43
SRP54-AS1-204ENST00000556705 MRC1P22897 1456 aa17.73■□□□□ 0.43
SRP54-AS1-204ENST00000556705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.72■□□□□ 0.43
SRP54-AS1-204ENST00000556705 POLD1P28340 1107 aa17.72■□□□□ 0.43
SRP54-AS1-204ENST00000556705 GAS2L2Q8NHY3 880 aa17.72■□□□□ 0.43
SRP54-AS1-204ENST00000556705 TJP1Q07157 1748 aa17.72■□□□□ 0.43
SRP54-AS1-204ENST00000556705 GNAT3A8MTJ3 354 aa17.71■□□□□ 0.43
SRP54-AS1-204ENST00000556705 GNPATO15228 680 aa17.71■□□□□ 0.43
SRP54-AS1-204ENST00000556705 SSFA2P28290 1259 aa17.71■□□□□ 0.43
SRP54-AS1-204ENST00000556705 SLC39A6Q13433 755 aa17.71■□□□□ 0.43
SRP54-AS1-204ENST00000556705 IL17REQ8NFR9 667 aa17.71■□□□□ 0.43
SRP54-AS1-204ENST00000556705 MAP3K5Q99683 1374 aa17.7■□□□□ 0.42
SRP54-AS1-204ENST00000556705 FCHSD2O94868 740 aa17.7■□□□□ 0.42
SRP54-AS1-204ENST00000556705 SIPA1L3O60292 1781 aaPredicted RBP17.7■□□□□ 0.42
SRP54-AS1-204ENST00000556705 RC3H1Q5TC82 1133 aaKnown RBP17.69■□□□□ 0.42
SRP54-AS1-204ENST00000556705 CICQ96RK0 1608 aaPredicted RBP17.69■□□□□ 0.42
SRP54-AS1-204ENST00000556705 CNTNAP4Q9C0A0 1308 aa17.68■□□□□ 0.42
SRP54-AS1-204ENST00000556705 UBR2Q8IWV8 1755 aa17.67■□□□□ 0.42
SRP54-AS1-204ENST00000556705 RALBP1Q15311 655 aa17.67■□□□□ 0.42
SRP54-AS1-204ENST00000556705 KLHL34Q8N239 644 aa17.67■□□□□ 0.42
SRP54-AS1-204ENST00000556705 RTCBQ9Y3I0 505 aaKnown RBP17.67■□□□□ 0.42
SRP54-AS1-204ENST00000556705 KCPQ6ZWJ8 1503 aa17.67■□□□□ 0.42
SRP54-AS1-204ENST00000556705 DLG5Q8TDM6 1919 aa17.66■□□□□ 0.42
SRP54-AS1-204ENST00000556705 RPS6KA4O75676 772 aa17.66■□□□□ 0.42
SRP54-AS1-204ENST00000556705 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
SRP54-AS1-204ENST00000556705 CRKLP46109 303 aaKnown RBP17.66■□□□□ 0.42
SRP54-AS1-204ENST00000556705 DNAJC10Q8IXB1 793 aa17.66■□□□□ 0.42
SRP54-AS1-204ENST00000556705 TEFQ10587 303 aa17.65■□□□□ 0.42
SRP54-AS1-204ENST00000556705 TRAPPC3LQ5T215 181 aa17.65■□□□□ 0.42
SRP54-AS1-204ENST00000556705 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
SRP54-AS1-204ENST00000556705 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
SRP54-AS1-204ENST00000556705 C4AP0C0L4 1744 aa17.64■□□□□ 0.41
SRP54-AS1-204ENST00000556705 DCAF8L1A6NGE4 600 aa17.64■□□□□ 0.41
SRP54-AS1-204ENST00000556705 INTS5Q6P9B9 1019 aaKnown RBP17.63■□□□□ 0.41
SRP54-AS1-204ENST00000556705 NLGN2Q8NFZ4 835 aa17.63■□□□□ 0.41
SRP54-AS1-204ENST00000556705 CYP19A1P11511 503 aaPredicted RBP17.62■□□□□ 0.41
SRP54-AS1-204ENST00000556705 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
SRP54-AS1-204ENST00000556705 DCTN1Q14203 1278 aa17.61■□□□□ 0.41
SRP54-AS1-204ENST00000556705 ZNF790Q6PG37 636 aa17.61■□□□□ 0.41
SRP54-AS1-204ENST00000556705 MCM10Q7L590 875 aa17.61■□□□□ 0.41
SRP54-AS1-204ENST00000556705 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
SRP54-AS1-204ENST00000556705 VSIG10Q8N0Z9 540 aa17.61■□□□□ 0.41
SRP54-AS1-204ENST00000556705 RFC4P35249 363 aa17.6■□□□□ 0.41
SRP54-AS1-204ENST00000556705 RTF1Q92541 710 aaKnown RBP17.6■□□□□ 0.41
SRP54-AS1-204ENST00000556705 ZNF496Q96IT1 587 aaPredicted RBP17.6■□□□□ 0.41
SRP54-AS1-204ENST00000556705 CCDC87Q9NVE4 849 aa17.6■□□□□ 0.41
SRP54-AS1-204ENST00000556705 MYBBP1AQ9BQG0 1328 aaKnown RBP17.6■□□□□ 0.41
SRP54-AS1-204ENST00000556705 KCNQ3O43525 872 aa17.59■□□□□ 0.41
SRP54-AS1-204ENST00000556705 GYS1P13807 737 aa17.59■□□□□ 0.41
SRP54-AS1-204ENST00000556705 BTBD11A6QL63 1104 aa17.58■□□□□ 0.4
SRP54-AS1-204ENST00000556705 HTATSF1O43719 755 aaKnown RBP17.58■□□□□ 0.4
SRP54-AS1-204ENST00000556705 MMP10P09238 476 aa17.58■□□□□ 0.4
SRP54-AS1-204ENST00000556705 NLGN1Q8N2Q7 840 aa17.58■□□□□ 0.4
SRP54-AS1-204ENST00000556705 SRP68Q9UHB9 627 aaKnown RBP17.58■□□□□ 0.4
SRP54-AS1-204ENST00000556705 CHD4Q14839 1912 aa17.58■□□□□ 0.4
SRP54-AS1-204ENST00000556705 HEG1Q9ULI3 1381 aa17.57■□□□□ 0.4
SRP54-AS1-204ENST00000556705 NEFMP07197 916 aa17.57■□□□□ 0.4
SRP54-AS1-204ENST00000556705 CD2APQ9Y5K6 639 aa17.57■□□□□ 0.4
SRP54-AS1-204ENST00000556705 SOS1Q07889 1333 aaPredicted RBP17.56■□□□□ 0.4
SRP54-AS1-204ENST00000556705 GPR162Q16538 588 aa17.56■□□□□ 0.4
SRP54-AS1-204ENST00000556705 PRKRIP1Q9H875 184 aaPredicted RBP17.56■□□□□ 0.4
SRP54-AS1-204ENST00000556705 ZBTB1Q9Y2K1 713 aa17.56■□□□□ 0.4
SRP54-AS1-204ENST00000556705 USP42Q9H9J4 1324 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms