RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 TATP17735 454 aaPredicted RBP23.07■■□□□ 1.28
SDR39U1-220ENST00000556548 COL18A1P39060 1754 aa23.06■■□□□ 1.28
SDR39U1-220ENST00000556548 CAMTA1Q9Y6Y1 1673 aa23.06■■□□□ 1.28
SDR39U1-220ENST00000556548 FLIIQ13045 1269 aa23.06■■□□□ 1.28
SDR39U1-220ENST00000556548 FKBP5Q13451 457 aaPredicted RBP23.06■■□□□ 1.28
SDR39U1-220ENST00000556548 LMO7Q8WWI1 1683 aa23.05■■□□□ 1.28
SDR39U1-220ENST00000556548 MEIS3Q99687 375 aa23.04■■□□□ 1.28
SDR39U1-220ENST00000556548 CPDO75976 1380 aa23.04■■□□□ 1.28
SDR39U1-220ENST00000556548 CRYBG1Q9Y4K1 1723 aa23.03■■□□□ 1.28
SDR39U1-220ENST00000556548 MEGF6O75095 1541 aa23.03■■□□□ 1.28
SDR39U1-220ENST00000556548 LNPKQ9C0E8 428 aa23.03■■□□□ 1.28
SDR39U1-220ENST00000556548 PHAXQ9H814 394 aaKnown RBP23.03■■□□□ 1.28
SDR39U1-220ENST00000556548 ANKRD45Q5TZF3 282 aa23.01■■□□□ 1.27
SDR39U1-220ENST00000556548 SPG7Q9UQ90 795 aa23.01■■□□□ 1.27
SDR39U1-220ENST00000556548 NUCB1Q02818 461 aa23■■□□□ 1.27
SDR39U1-220ENST00000556548 IPO9Q96P70 1041 aaKnown RBP23■■□□□ 1.27
SDR39U1-220ENST00000556548 ANXA1P04083 346 aa23■■□□□ 1.27
SDR39U1-220ENST00000556548 PHKG2P15735 406 aa23■■□□□ 1.27
SDR39U1-220ENST00000556548 TOM1L2Q6ZVM7 507 aa22.99■■□□□ 1.27
SDR39U1-220ENST00000556548 CHPF2Q9P2E5 772 aa22.99■■□□□ 1.27
SDR39U1-220ENST00000556548 FAM208AQ9UK61 1670 aaKnown RBP22.99■■□□□ 1.27
SDR39U1-220ENST00000556548 SOS1Q07889 1333 aaPredicted RBP22.99■■□□□ 1.27
SDR39U1-220ENST00000556548 PRAMEF22A3QJZ6 481 aa22.99■■□□□ 1.27
SDR39U1-220ENST00000556548 CHD1LQ86WJ1 897 aa22.98■■□□□ 1.27
SDR39U1-220ENST00000556548 SEC24BO95487 1268 aa22.98■■□□□ 1.27
SDR39U1-220ENST00000556548 CCT4P50991 539 aaKnown RBP22.98■■□□□ 1.27
SDR39U1-220ENST00000556548 SLC39A6Q13433 755 aa22.98■■□□□ 1.27
SDR39U1-220ENST00000556548 STRN4Q9NRL3 753 aa22.98■■□□□ 1.27
SDR39U1-220ENST00000556548 IFNL2Q8IZJ0 200 aa22.97■■□□□ 1.27
SDR39U1-220ENST00000556548 NFATC2IPQ8NCF5 419 aa22.97■■□□□ 1.27
SDR39U1-220ENST00000556548 GCC1Q96CN9 775 aa22.97■■□□□ 1.27
SDR39U1-220ENST00000556548 KDM3BQ7LBC6 1761 aa22.97■■□□□ 1.27
SDR39U1-220ENST00000556548 CYP27B1O15528 508 aa22.96■■□□□ 1.27
SDR39U1-220ENST00000556548 CEP85Q6P2H3 762 aa22.96■■□□□ 1.27
SDR39U1-220ENST00000556548 KDM6AO15550 1401 aaPredicted RBP22.95■■□□□ 1.26
SDR39U1-220ENST00000556548 WDR17Q8IZU2 1322 aa22.95■■□□□ 1.26
SDR39U1-220ENST00000556548 ANKRD44Q8N8A2 993 aa22.94■■□□□ 1.26
SDR39U1-220ENST00000556548 VIRMAQ69YN4 1812 aaKnown RBP22.94■■□□□ 1.26
SDR39U1-220ENST00000556548 GIGYF1O75420 1035 aaPredicted RBP22.94■■□□□ 1.26
SDR39U1-220ENST00000556548 SLC52A2Q9HAB3 445 aa22.94■■□□□ 1.26
SDR39U1-220ENST00000556548 OVOS2A0A0G2JMS6 1433 aa22.93■■□□□ 1.26
SDR39U1-220ENST00000556548 HOXB7P09629 217 aa22.93■■□□□ 1.26
SDR39U1-220ENST00000556548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.93■■□□□ 1.26
SDR39U1-220ENST00000556548 ATP10DQ9P241 1426 aa22.93■■□□□ 1.26
SDR39U1-220ENST00000556548 ABCC6O95255 1503 aa22.92■■□□□ 1.26
SDR39U1-220ENST00000556548 EVA1CP58658 441 aa22.92■■□□□ 1.26
SDR39U1-220ENST00000556548 LARP1Q6PKG0 1096 aaKnown RBP22.92■■□□□ 1.26
SDR39U1-220ENST00000556548 NOP58Q9Y2X3 529 aaKnown RBP22.92■■□□□ 1.26
SDR39U1-220ENST00000556548 APBB1O00213 710 aa22.91■■□□□ 1.26
SDR39U1-220ENST00000556548 RPAP2Q8IXW5 612 aaPredicted RBP22.91■■□□□ 1.26
SDR39U1-220ENST00000556548 USP35Q9P2H5 1018 aa22.91■■□□□ 1.26
SDR39U1-220ENST00000556548 ZBTB47Q9UFB7 747 aaPredicted RBP22.91■■□□□ 1.26
SDR39U1-220ENST00000556548 PROSER3Q2NL68 480 aa22.91■■□□□ 1.26
SDR39U1-220ENST00000556548 ZNF790Q6PG37 636 aa22.91■■□□□ 1.26
SDR39U1-220ENST00000556548 COL5A2P05997 1499 aaPredicted RBP22.91■■□□□ 1.26
SDR39U1-220ENST00000556548 DCTPP1Q9H773 170 aa22.9■■□□□ 1.26
SDR39U1-220ENST00000556548 DCAF5Q96JK2 942 aa22.89■■□□□ 1.25
SDR39U1-220ENST00000556548 NHSL1Q5SYE7 1610 aa22.89■■□□□ 1.25
SDR39U1-220ENST00000556548 PI4KAP2A4QPH2 592 aa22.88■■□□□ 1.25
SDR39U1-220ENST00000556548 GNAI2P04899 355 aa22.88■■□□□ 1.25
SDR39U1-220ENST00000556548 PI4KAP1Q8N8J0 262 aa22.88■■□□□ 1.25
SDR39U1-220ENST00000556548 DBF4Q9UBU7 674 aaPredicted RBP22.88■■□□□ 1.25
SDR39U1-220ENST00000556548 ZCRB1Q8TBF4 217 aaKnown RBP22.87■■□□□ 1.25
SDR39U1-220ENST00000556548 HEG1Q9ULI3 1381 aa22.87■■□□□ 1.25
SDR39U1-220ENST00000556548 CABP4P57796 275 aa22.86■■□□□ 1.25
SDR39U1-220ENST00000556548 ABCA3Q99758 1704 aa22.86■■□□□ 1.25
SDR39U1-220ENST00000556548 SIPA1L3O60292 1781 aaPredicted RBP22.86■■□□□ 1.25
SDR39U1-220ENST00000556548 ADAMTS7Q9UKP4 1686 aa22.86■■□□□ 1.25
SDR39U1-220ENST00000556548 DDX54Q8TDD1 881 aaKnown RBP22.86■■□□□ 1.25
SDR39U1-220ENST00000556548 CHMP4AQ9BY43 222 aa22.86■■□□□ 1.25
SDR39U1-220ENST00000556548 C16orf71Q8IYS4 520 aaPredicted RBP22.85■■□□□ 1.25
SDR39U1-220ENST00000556548 USP44Q9H0E7 712 aa22.85■■□□□ 1.25
SDR39U1-220ENST00000556548 SMARCA5O60264 1052 aaPredicted RBP22.85■■□□□ 1.25
SDR39U1-220ENST00000556548 GNAI3P08754 354 aa22.85■■□□□ 1.25
SDR39U1-220ENST00000556548 ZNF496Q96IT1 587 aaPredicted RBP22.85■■□□□ 1.25
SDR39U1-220ENST00000556548 CARD10Q9BWT7 1032 aa22.85■■□□□ 1.25
SDR39U1-220ENST00000556548 BTG4Q9NY30 223 aa22.85■■□□□ 1.25
SDR39U1-220ENST00000556548 LRRFIP2Q9Y608 721 aaKnown RBP22.85■■□□□ 1.25
SDR39U1-220ENST00000556548 SCN11AQ9UI33 1791 aa22.84■■□□□ 1.25
SDR39U1-220ENST00000556548 IL2RBP14784 551 aa22.84■■□□□ 1.25
SDR39U1-220ENST00000556548 DNAAF4Q8WXU2 420 aa22.84■■□□□ 1.25
SDR39U1-220ENST00000556548 SRCIN1Q9C0H9 1055 aa22.84■■□□□ 1.25
SDR39U1-220ENST00000556548 CACNA1FO60840 1977 aa22.84■■□□□ 1.25
SDR39U1-220ENST00000556548 HSP90AB1P08238 724 aaKnown RBP22.83■■□□□ 1.25
SDR39U1-220ENST00000556548 AIMP1Q12904 312 aaKnown RBP22.83■■□□□ 1.25
SDR39U1-220ENST00000556548 TTC5Q8N0Z6 440 aa22.83■■□□□ 1.25
SDR39U1-220ENST00000556548 HMMRO75330 724 aa22.82■■□□□ 1.24
SDR39U1-220ENST00000556548 MYL6BP14649 208 aa22.82■■□□□ 1.24
SDR39U1-220ENST00000556548 ROBO1Q9Y6N7 1651 aa22.82■■□□□ 1.24
SDR39U1-220ENST00000556548 ADCY9O60503 1353 aa22.82■■□□□ 1.24
SDR39U1-220ENST00000556548 PNMA6EA0A0J9YXQ4 647 aa22.81■■□□□ 1.24
SDR39U1-220ENST00000556548 UBTFL1P0CB47 393 aaPredicted RBP22.81■■□□□ 1.24
SDR39U1-220ENST00000556548 PIP4K2AP48426 406 aaPredicted RBP22.81■■□□□ 1.24
SDR39U1-220ENST00000556548 SLC4A3P48751 1232 aa22.81■■□□□ 1.24
SDR39U1-220ENST00000556548 BEND3Q5T5X7 828 aa22.81■■□□□ 1.24
SDR39U1-220ENST00000556548 MAP3K2Q9Y2U5 619 aa22.81■■□□□ 1.24
SDR39U1-220ENST00000556548 PCDH11XQ9BZA7 1347 aa22.81■■□□□ 1.24
SDR39U1-220ENST00000556548 PCDH11YQ9BZA8 1340 aa22.81■■□□□ 1.24
SDR39U1-220ENST00000556548 PKD1L3Q7Z443 1732 aa22.81■■□□□ 1.24
SDR39U1-220ENST00000556548 OTUD7AQ8TE49 926 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms