RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 ITPK1Q13572 414 aa13.44□□□□□ -0.26
CRX-203ENST00000556527 EIF4A2Q14240 407 aaKnown RBP13.44□□□□□ -0.26
CRX-203ENST00000556527 PLEKHO1Q53GL0 409 aaPredicted RBP13.44□□□□□ -0.26
CRX-203ENST00000556527 NLGN1Q8N2Q7 840 aa13.44□□□□□ -0.26
CRX-203ENST00000556527 ATG3Q9NT62 314 aa13.44□□□□□ -0.26
CRX-203ENST00000556527 ERVV-2B6SEH9 535 aa13.43□□□□□ -0.26
CRX-203ENST00000556527 RFC4P35249 363 aa13.43□□□□□ -0.26
CRX-203ENST00000556527 DCAF5Q96JK2 942 aa13.43□□□□□ -0.26
CRX-203ENST00000556527 PCGF6Q9BYE7 350 aa13.43□□□□□ -0.26
CRX-203ENST00000556527 ANKRD26Q9UPS8 1709 aa13.43□□□□□ -0.26
CRX-203ENST00000556527 PLEKHG2Q9H7P9 1386 aa13.43□□□□□ -0.26
CRX-203ENST00000556527 UBR3Q6ZT12 1888 aa13.42□□□□□ -0.26
CRX-203ENST00000556527 CABP4P57796 275 aa13.42□□□□□ -0.26
CRX-203ENST00000556527 AMOTQ4VCS5 1084 aa13.42□□□□□ -0.26
CRX-203ENST00000556527 C1orf141Q5JVX7 400 aa13.42□□□□□ -0.26
CRX-203ENST00000556527 ZNF530Q6P9A1 599 aaPredicted RBP13.42□□□□□ -0.26
CRX-203ENST00000556527 ADRA2BP18089 450 aa13.41□□□□□ -0.26
CRX-203ENST00000556527 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.26
CRX-203ENST00000556527 CCDC87Q9NVE4 849 aa13.41□□□□□ -0.26
CRX-203ENST00000556527 BCS1LQ9Y276 419 aa13.41□□□□□ -0.26
CRX-203ENST00000556527 PARP3Q9Y6F1 533 aa13.41□□□□□ -0.26
CRX-203ENST00000556527 ADCY9O60503 1353 aa13.41□□□□□ -0.26
CRX-203ENST00000556527 MAP2P11137 1827 aaKnown RBP13.41□□□□□ -0.26
CRX-203ENST00000556527 CLSPNQ9HAW4 1339 aa13.4□□□□□ -0.26
CRX-203ENST00000556527 HSPA6P17066 643 aa13.4□□□□□ -0.26
CRX-203ENST00000556527 MTHFSP49914 203 aa13.4□□□□□ -0.26
CRX-203ENST00000556527 TGFB2P61812 414 aa13.4□□□□□ -0.26
CRX-203ENST00000556527 MORC1Q86VD1 984 aa13.4□□□□□ -0.26
CRX-203ENST00000556527 RC3H1Q5TC82 1133 aaKnown RBP13.39□□□□□ -0.27
CRX-203ENST00000556527 ARHGAP27Q6ZUM4 889 aa13.39□□□□□ -0.27
CRX-203ENST00000556527 PANK3Q9H999 370 aa13.39□□□□□ -0.27
CRX-203ENST00000556527 A0A0G2JLW4 131 aa13.38□□□□□ -0.27
CRX-203ENST00000556527 PTCD1O75127 700 aaKnown RBP13.38□□□□□ -0.27
CRX-203ENST00000556527 ARHGEF1Q92888 912 aaKnown RBP13.38□□□□□ -0.27
CRX-203ENST00000556527 CEP350Q5VT06 3117 aa13.38□□□□□ -0.27
CRX-203ENST00000556527 CICQ96RK0 1608 aaPredicted RBP13.38□□□□□ -0.27
CRX-203ENST00000556527 CNTNAP4Q9C0A0 1308 aa13.38□□□□□ -0.27
CRX-203ENST00000556527 KDRP35968 1356 aa13.37□□□□□ -0.27
CRX-203ENST00000556527 RPS6KA4O75676 772 aa13.37□□□□□ -0.27
CRX-203ENST00000556527 FCHSD2O94868 740 aa13.37□□□□□ -0.27
CRX-203ENST00000556527 KNSTRNQ9Y448 316 aa13.37□□□□□ -0.27
CRX-203ENST00000556527 PXDNLA1KZ92 1463 aa13.36□□□□□ -0.27
CRX-203ENST00000556527 IFFO2Q5TF58 517 aa13.36□□□□□ -0.27
CRX-203ENST00000556527 HSPA5P11021 654 aaKnown RBP13.35□□□□□ -0.27
CRX-203ENST00000556527 GYS1P13807 737 aa13.35□□□□□ -0.27
CRX-203ENST00000556527 DPEP1P16444 411 aa13.35□□□□□ -0.27
CRX-203ENST00000556527 SULT6B1Q6IMI4 303 aa13.35□□□□□ -0.27
CRX-203ENST00000556527 NFATC2IPQ8NCF5 419 aa13.35□□□□□ -0.27
CRX-203ENST00000556527 SLC4A9Q96Q91 983 aa13.35□□□□□ -0.27
CRX-203ENST00000556527 C10orf71Q711Q0 1435 aa13.35□□□□□ -0.27
CRX-203ENST00000556527 CRKLP46109 303 aaKnown RBP13.34□□□□□ -0.27
CRX-203ENST00000556527 AEBP1Q8IUX7 1158 aa13.34□□□□□ -0.27
CRX-203ENST00000556527 C16orf71Q8IYS4 520 aaPredicted RBP13.34□□□□□ -0.27
CRX-203ENST00000556527 KDM6AO15550 1401 aaPredicted RBP13.33□□□□□ -0.28
CRX-203ENST00000556527 PIM2Q9P1W9 311 aa13.33□□□□□ -0.28
CRX-203ENST00000556527 ZNF831Q5JPB2 1677 aa13.32□□□□□ -0.28
CRX-203ENST00000556527 KIF3CO14782 793 aa13.32□□□□□ -0.28
CRX-203ENST00000556527 ZPR1O75312 459 aa13.32□□□□□ -0.28
CRX-203ENST00000556527 TOMM70O94826 608 aa13.32□□□□□ -0.28
CRX-203ENST00000556527 APLP1P51693 650 aa13.32□□□□□ -0.28
CRX-203ENST00000556527 DALRD3Q5D0E6 543 aaKnown RBP13.32□□□□□ -0.28
CRX-203ENST00000556527 C4AP0C0L4 1744 aa13.32□□□□□ -0.28
CRX-203ENST00000556527 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
CRX-203ENST00000556527 C9orf131Q5VYM1 1079 aa13.3□□□□□ -0.28
CRX-203ENST00000556527 CCER1Q8TC90 406 aaPredicted RBP13.3□□□□□ -0.28
CRX-203ENST00000556527 SRP68Q9UHB9 627 aaKnown RBP13.3□□□□□ -0.28
CRX-203ENST00000556527 KDM2BQ8NHM5 1336 aa13.3□□□□□ -0.28
CRX-203ENST00000556527 USP42Q9H9J4 1324 aaKnown RBP13.3□□□□□ -0.28
CRX-203ENST00000556527 FKBP8Q14318 412 aa13.29□□□□□ -0.28
CRX-203ENST00000556527 AKAP4Q5JQC9 854 aa13.29□□□□□ -0.28
CRX-203ENST00000556527 COL5A3P25940 1745 aaPredicted RBP13.29□□□□□ -0.28
CRX-203ENST00000556527 KIF13BQ9NQT8 1826 aa13.29□□□□□ -0.28
CRX-203ENST00000556527 IL13P35225 146 aa13.28□□□□□ -0.28
CRX-203ENST00000556527 SLC52A2Q9HAB3 445 aa13.28□□□□□ -0.28
CRX-203ENST00000556527 NMRK2Q9NPI5 230 aa13.28□□□□□ -0.28
CRX-203ENST00000556527 RNF181Q9P0P0 153 aa13.28□□□□□ -0.28
CRX-203ENST00000556527 HMOX1P09601 288 aa13.26□□□□□ -0.29
CRX-203ENST00000556527 KCNA3P22001 575 aa13.26□□□□□ -0.29
CRX-203ENST00000556527 CHRNA5P30532 468 aa13.26□□□□□ -0.29
CRX-203ENST00000556527 DDR1Q08345 913 aa13.26□□□□□ -0.29
CRX-203ENST00000556527 USPL1Q5W0Q7 1092 aa13.26□□□□□ -0.29
CRX-203ENST00000556527 INTS5Q6P9B9 1019 aaKnown RBP13.26□□□□□ -0.29
CRX-203ENST00000556527 DNAJC10Q8IXB1 793 aa13.26□□□□□ -0.29
CRX-203ENST00000556527 KIAA1551Q9HCM1 1747 aa13.25□□□□□ -0.29
CRX-203ENST00000556527 POLRMTO00411 1230 aaKnown RBP13.25□□□□□ -0.29
CRX-203ENST00000556527 TTC5Q8N0Z6 440 aa13.25□□□□□ -0.29
CRX-203ENST00000556527 RBM46Q8TBY0 533 aaKnown RBP13.25□□□□□ -0.29
CRX-203ENST00000556527 RNMTO43148 476 aaKnown RBP13.24□□□□□ -0.29
CRX-203ENST00000556527 DIAPH1O60610 1272 aaKnown RBP13.24□□□□□ -0.29
CRX-203ENST00000556527 SLC39A6Q13433 755 aa13.24□□□□□ -0.29
CRX-203ENST00000556527 NPM2Q86SE8 214 aaKnown RBP13.24□□□□□ -0.29
CRX-203ENST00000556527 LGR6Q9HBX8 967 aa13.24□□□□□ -0.29
CRX-203ENST00000556527 COL15A1P39059 1388 aa13.23□□□□□ -0.29
CRX-203ENST00000556527 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
CRX-203ENST00000556527 STARD3NLO95772 234 aa13.23□□□□□ -0.29
CRX-203ENST00000556527 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
CRX-203ENST00000556527 TM4SF1P30408 202 aa13.23□□□□□ -0.29
CRX-203ENST00000556527 FSTL1Q12841 308 aa13.23□□□□□ -0.29
CRX-203ENST00000556527 NARFQ9UHQ1 456 aa13.23□□□□□ -0.29
CRX-203ENST00000556527 TJP1Q07157 1748 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms