RNA–Protein interactions for RNA: ENST00000556371.1

ITGA7-216, Transcript of integrin subunit alpha 7, humanhuman

TSL 4

Gene ITGA7, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-216ENST00000556371 SLC4A2P04920 1241 aa12.67□□□□□ -0.38
ITGA7-216ENST00000556371 AAMPQ13685 434 aa12.67□□□□□ -0.38
ITGA7-216ENST00000556371 TMEM57Q8N5G2 664 aa12.67□□□□□ -0.38
ITGA7-216ENST00000556371 NFATC2IPQ8NCF5 419 aa12.67□□□□□ -0.38
ITGA7-216ENST00000556371 API5Q9BZZ5 524 aaKnown RBP12.67□□□□□ -0.38
ITGA7-216ENST00000556371 SLC52A2Q9HAB3 445 aa12.67□□□□□ -0.38
ITGA7-216ENST00000556371 USP35Q9P2H5 1018 aa12.67□□□□□ -0.38
ITGA7-216ENST00000556371 KDM6AO15550 1401 aaPredicted RBP12.66□□□□□ -0.38
ITGA7-216ENST00000556371 CCDC30Q5VVM6 783 aa12.66□□□□□ -0.38
ITGA7-216ENST00000556371 NKX1-1Q15270 411 aaPredicted RBP12.65□□□□□ -0.38
ITGA7-216ENST00000556371 G2E3Q7L622 706 aa12.65□□□□□ -0.38
ITGA7-216ENST00000556371 DDX54Q8TDD1 881 aaKnown RBP12.65□□□□□ -0.38
ITGA7-216ENST00000556371 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
ITGA7-216ENST00000556371 PCDH11XQ9BZA7 1347 aa12.64□□□□□ -0.39
ITGA7-216ENST00000556371 PCDH11YQ9BZA8 1340 aa12.64□□□□□ -0.39
ITGA7-216ENST00000556371 ADAMTS7Q9UKP4 1686 aa12.64□□□□□ -0.39
ITGA7-216ENST00000556371 CABP4P57796 275 aa12.64□□□□□ -0.39
ITGA7-216ENST00000556371 ITPRIPQ8IWB1 547 aa12.64□□□□□ -0.39
ITGA7-216ENST00000556371 STK31Q9BXU1 1019 aa12.64□□□□□ -0.39
ITGA7-216ENST00000556371 DDX19BQ9UMR2 479 aa12.64□□□□□ -0.39
ITGA7-216ENST00000556371 PKD1L3Q7Z443 1732 aa12.64□□□□□ -0.39
ITGA7-216ENST00000556371 JCADQ9P266 1359 aa12.64□□□□□ -0.39
ITGA7-216ENST00000556371 HOXB7P09629 217 aa12.63□□□□□ -0.39
ITGA7-216ENST00000556371 SLC39A6Q13433 755 aa12.63□□□□□ -0.39
ITGA7-216ENST00000556371 HDGFL1Q5TGJ6 251 aa12.63□□□□□ -0.39
ITGA7-216ENST00000556371 CHMP4AQ9BY43 222 aa12.63□□□□□ -0.39
ITGA7-216ENST00000556371 PCDHB15Q9Y5E8 787 aa12.63□□□□□ -0.39
ITGA7-216ENST00000556371 HEG1Q9ULI3 1381 aa12.63□□□□□ -0.39
ITGA7-216ENST00000556371 ABCC4O15439 1325 aa12.62□□□□□ -0.39
ITGA7-216ENST00000556371 PTPRCP08575 1304 aa12.62□□□□□ -0.39
ITGA7-216ENST00000556371 ERVV-2B6SEH9 535 aa12.62□□□□□ -0.39
ITGA7-216ENST00000556371 GIGYF1O75420 1035 aaPredicted RBP12.62□□□□□ -0.39
ITGA7-216ENST00000556371 IGHDP01880 384 aa12.62□□□□□ -0.39
ITGA7-216ENST00000556371 EIF2S2P20042 333 aaKnown RBP12.62□□□□□ -0.39
ITGA7-216ENST00000556371 ZNF790Q6PG37 636 aa12.62□□□□□ -0.39
ITGA7-216ENST00000556371 PARP4Q9UKK3 1724 aaKnown RBP12.62□□□□□ -0.39
ITGA7-216ENST00000556371 KDM2BQ8NHM5 1336 aa12.62□□□□□ -0.39
ITGA7-216ENST00000556371 EXOC5O00471 708 aa12.61□□□□□ -0.39
ITGA7-216ENST00000556371 ZBTB7BO15156 539 aaPredicted RBP12.61□□□□□ -0.39
ITGA7-216ENST00000556371 CENPQQ7L2Z9 268 aaPredicted RBP12.61□□□□□ -0.39
ITGA7-216ENST00000556371 ZBTB40Q9NUA8 1239 aa12.61□□□□□ -0.39
ITGA7-216ENST00000556371 DISP2A7MBM2 1401 aa12.61□□□□□ -0.39
ITGA7-216ENST00000556371 KDM3BQ7LBC6 1761 aa12.61□□□□□ -0.39
ITGA7-216ENST00000556371 SPATA31A1Q5TZJ5 1347 aa12.61□□□□□ -0.39
ITGA7-216ENST00000556371 HSPA1LP34931 641 aa12.6□□□□□ -0.39
ITGA7-216ENST00000556371 INTS3Q68E01 1043 aaKnown RBP12.6□□□□□ -0.39
ITGA7-216ENST00000556371 NGLY1Q96IV0 654 aa12.6□□□□□ -0.39
ITGA7-216ENST00000556371 THRAP3Q9Y2W1 955 aaKnown RBP12.6□□□□□ -0.39
ITGA7-216ENST00000556371 SCN11AQ9UI33 1791 aa12.6□□□□□ -0.39
ITGA7-216ENST00000556371 SPATA31A5Q5VU36 1347 aa12.6□□□□□ -0.39
ITGA7-216ENST00000556371 SPATA31A7Q8IWB4 1347 aa12.6□□□□□ -0.39
ITGA7-216ENST00000556371 SIPA1L3O60292 1781 aaPredicted RBP12.59□□□□□ -0.39
ITGA7-216ENST00000556371 PRAMEF22A3QJZ6 481 aa12.59□□□□□ -0.39
ITGA7-216ENST00000556371 FLIIQ13045 1269 aa12.59□□□□□ -0.39
ITGA7-216ENST00000556371 ZNF496Q96IT1 587 aaPredicted RBP12.59□□□□□ -0.39
ITGA7-216ENST00000556371 CDCA7Q9BWT1 371 aaPredicted RBP12.59□□□□□ -0.39
ITGA7-216ENST00000556371 CHMP4BQ9H444 224 aaKnown RBP12.59□□□□□ -0.39
ITGA7-216ENST00000556371 SPATA31A6Q5VVP1 1343 aa12.59□□□□□ -0.39
ITGA7-216ENST00000556371 MRC1P22897 1456 aa12.59□□□□□ -0.39
ITGA7-216ENST00000556371 SLIT2O94813 1529 aa12.58□□□□□ -0.4
ITGA7-216ENST00000556371 RGS12O14924 1447 aa12.58□□□□□ -0.4
ITGA7-216ENST00000556371 UNC5CLQ8IV45 518 aa12.58□□□□□ -0.4
ITGA7-216ENST00000556371 TTC5Q8N0Z6 440 aa12.58□□□□□ -0.4
ITGA7-216ENST00000556371 C8orf37Q96NL8 207 aa12.58□□□□□ -0.4
ITGA7-216ENST00000556371 RWDD1Q9H446 243 aaPredicted RBP12.58□□□□□ -0.4
ITGA7-216ENST00000556371 PHAXQ9H814 394 aaKnown RBP12.58□□□□□ -0.4
ITGA7-216ENST00000556371 CHPF2Q9P2E5 772 aa12.58□□□□□ -0.4
ITGA7-216ENST00000556371 CCDC9Q9Y3X0 531 aaKnown RBP12.58□□□□□ -0.4
ITGA7-216ENST00000556371 VIRMAQ69YN4 1812 aaKnown RBP12.58□□□□□ -0.4
ITGA7-216ENST00000556371 PLCH1Q4KWH8 1693 aa12.57□□□□□ -0.4
ITGA7-216ENST00000556371 F6X3S4 739 aa12.57□□□□□ -0.4
ITGA7-216ENST00000556371 FKBP5Q13451 457 aaPredicted RBP12.57□□□□□ -0.4
ITGA7-216ENST00000556371 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
ITGA7-216ENST00000556371 DBF4Q9UBU7 674 aaPredicted RBP12.57□□□□□ -0.4
ITGA7-216ENST00000556371 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
ITGA7-216ENST00000556371 CCT4P50991 539 aaKnown RBP12.56□□□□□ -0.4
ITGA7-216ENST00000556371 SLC4A10Q6U841 1118 aa12.56□□□□□ -0.4
ITGA7-216ENST00000556371 BARGINQ6ZT62 677 aa12.56□□□□□ -0.4
ITGA7-216ENST00000556371 FNBP4Q8N3X1 1017 aaPredicted RBP12.56□□□□□ -0.4
ITGA7-216ENST00000556371 NRAPQ86VF7 1730 aa12.55□□□□□ -0.4
ITGA7-216ENST00000556371 ANXA1P04083 346 aa12.55□□□□□ -0.4
ITGA7-216ENST00000556371 PDIA6Q15084 440 aa12.55□□□□□ -0.4
ITGA7-216ENST00000556371 VPS72Q15906 364 aa12.55□□□□□ -0.4
ITGA7-216ENST00000556371 TMOD3Q9NYL9 352 aa12.55□□□□□ -0.4
ITGA7-216ENST00000556371 USP16Q9Y5T5 823 aa12.55□□□□□ -0.4
ITGA7-216ENST00000556371 SHANK3Q9BYB0 1731 aa12.54□□□□□ -0.4
ITGA7-216ENST00000556371 HDAC1Q13547 482 aaPredicted RBP12.54□□□□□ -0.4
ITGA7-216ENST00000556371 DDB1Q16531 1140 aa12.54□□□□□ -0.4
ITGA7-216ENST00000556371 PROSER3Q2NL68 480 aa12.54□□□□□ -0.4
ITGA7-216ENST00000556371 PIGBQ92521 554 aa12.54□□□□□ -0.4
ITGA7-216ENST00000556371 DDX21Q9NR30 783 aaKnown RBP eCLIP12.54□□□□□ -0.4
ITGA7-216ENST00000556371 HYPKQ9NX55 129 aa12.54□□□□□ -0.4
ITGA7-216ENST00000556371 BCL9LQ86UU0 1499 aa12.53□□□□□ -0.4
ITGA7-216ENST00000556371 SKAP1Q86WV1 359 aa12.53□□□□□ -0.4
ITGA7-216ENST00000556371 C1orf115Q9H7X2 142 aa12.53□□□□□ -0.4
ITGA7-216ENST00000556371 TSHZ2Q9NRE2 1034 aa12.53□□□□□ -0.4
ITGA7-216ENST00000556371 USP21Q9UK80 565 aa12.53□□□□□ -0.4
ITGA7-216ENST00000556371 NWD2Q9ULI1 1742 aa12.53□□□□□ -0.4
ITGA7-216ENST00000556371 LRP6O75581 1613 aa12.52□□□□□ -0.4
ITGA7-216ENST00000556371 PI4KAP2A4QPH2 592 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms