RNA–Protein interactions for RNA: ENST00000556138.1

LINC01550-205, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 4

Gene LINC01550, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-205ENST00000556138 PLEKHM2Q8IWE5 1019 aa7.76□□□□□ -1.17
LINC01550-205ENST00000556138 NANOS1Q8WY41 292 aaKnown RBP7.76□□□□□ -1.17
LINC01550-205ENST00000556138 CALR3Q96L12 384 aaKnown RBP7.76□□□□□ -1.17
LINC01550-205ENST00000556138 ZNF777Q9ULD5 760 aaPredicted RBP7.76□□□□□ -1.17
LINC01550-205ENST00000556138 NOD1Q9Y239 953 aa7.76□□□□□ -1.17
LINC01550-205ENST00000556138 USP3Q9Y6I4 520 aa7.76□□□□□ -1.17
LINC01550-205ENST00000556138 CLDN10P78369 228 aa7.75□□□□□ -1.17
LINC01550-205ENST00000556138 C4orf17Q53FE4 359 aa7.75□□□□□ -1.17
LINC01550-205ENST00000556138 TAS1R3Q7RTX0 852 aa7.75□□□□□ -1.17
LINC01550-205ENST00000556138 TFIP11Q9UBB9 837 aaKnown RBP7.75□□□□□ -1.17
LINC01550-205ENST00000556138 PALM3A6NDB9 673 aaPredicted RBP7.74□□□□□ -1.17
LINC01550-205ENST00000556138 ZBTB7BO15156 539 aaPredicted RBP7.74□□□□□ -1.17
LINC01550-205ENST00000556138 LZTS3O60299 673 aaPredicted RBP7.74□□□□□ -1.17
LINC01550-205ENST00000556138 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.74□□□□□ -1.17
LINC01550-205ENST00000556138 GAS2L1Q99501 681 aaPredicted RBP7.74□□□□□ -1.17
LINC01550-205ENST00000556138 DYRK1BQ9Y463 629 aa7.74□□□□□ -1.17
LINC01550-205ENST00000556138 MAFBQ9Y5Q3 323 aaPredicted RBP7.74□□□□□ -1.17
LINC01550-205ENST00000556138 GTF3C3Q9Y5Q9 886 aa7.74□□□□□ -1.17
LINC01550-205ENST00000556138 PSME1Q06323 249 aa7.73□□□□□ -1.17
LINC01550-205ENST00000556138 DBN1Q16643 649 aa7.73□□□□□ -1.17
LINC01550-205ENST00000556138 RNFT1Q5M7Z0 435 aa7.73□□□□□ -1.17
LINC01550-205ENST00000556138 TMEM214Q6NUQ4 689 aaKnown RBP7.73□□□□□ -1.17
LINC01550-205ENST00000556138 PPARGC1BQ86YN6 1023 aaKnown RBP7.73□□□□□ -1.17
LINC01550-205ENST00000556138 ZNF295-AS1Q8N0V1 137 aa7.73□□□□□ -1.17
LINC01550-205ENST00000556138 ZNF837Q96EG3 531 aaPredicted RBP7.73□□□□□ -1.17
LINC01550-205ENST00000556138 TIMMDC1Q9NPL8 285 aa7.73□□□□□ -1.17
LINC01550-205ENST00000556138 ZNF358Q9NW07 568 aa7.73□□□□□ -1.17
LINC01550-205ENST00000556138 THBS1P07996 1170 aa7.72□□□□□ -1.17
LINC01550-205ENST00000556138 SMTNP53814 917 aa7.72□□□□□ -1.17
LINC01550-205ENST00000556138 WDR44Q5JSH3 913 aa7.72□□□□□ -1.17
LINC01550-205ENST00000556138 RIPOR1Q6ZS17 1223 aa7.72□□□□□ -1.17
LINC01550-205ENST00000556138 SLC4A9Q96Q91 983 aa7.72□□□□□ -1.17
LINC01550-205ENST00000556138 COL25A1Q9BXS0 654 aaPredicted RBP7.72□□□□□ -1.17
LINC01550-205ENST00000556138 PPP1R12CQ9BZL4 782 aa7.72□□□□□ -1.17
LINC01550-205ENST00000556138 GPAMQ9HCL2 828 aa7.72□□□□□ -1.17
LINC01550-205ENST00000556138 MKRN1Q9UHC7 482 aaKnown RBP7.72□□□□□ -1.17
LINC01550-205ENST00000556138 MTFR1Q15390 333 aa7.71□□□□□ -1.18
LINC01550-205ENST00000556138 SV2AQ7L0J3 742 aa7.71□□□□□ -1.18
LINC01550-205ENST00000556138 OGFOD1Q8N543 542 aa7.71□□□□□ -1.18
LINC01550-205ENST00000556138 RHBDD1Q8TEB9 315 aa7.71□□□□□ -1.18
LINC01550-205ENST00000556138 IQSEC3Q9UPP2 1182 aaPredicted RBP7.71□□□□□ -1.18
LINC01550-205ENST00000556138 A6NJY4 79 aa7.7□□□□□ -1.18
LINC01550-205ENST00000556138 GPR25O00155 361 aa7.7□□□□□ -1.18
LINC01550-205ENST00000556138 GNASQ5JWF2 1037 aa7.7□□□□□ -1.18
LINC01550-205ENST00000556138 TRIM22Q8IYM9 498 aa7.7□□□□□ -1.18
LINC01550-205ENST00000556138 TPCN2Q8NHX9 752 aa7.7□□□□□ -1.18
LINC01550-205ENST00000556138 CNTNAP3BQ96NU0 1288 aa7.7□□□□□ -1.18
LINC01550-205ENST00000556138 CNTNAP3Q9BZ76 1288 aa7.7□□□□□ -1.18
LINC01550-205ENST00000556138 DKK1O94907 266 aa7.69□□□□□ -1.18
LINC01550-205ENST00000556138 F11P03951 625 aa7.69□□□□□ -1.18
LINC01550-205ENST00000556138 PLA2G4AP47712 749 aa7.69□□□□□ -1.18
LINC01550-205ENST00000556138 EPHA4P54764 986 aa7.69□□□□□ -1.18
LINC01550-205ENST00000556138 INSM1Q01101 510 aaPredicted RBP7.69□□□□□ -1.18
LINC01550-205ENST00000556138 GAS6Q14393 721 aa7.69□□□□□ -1.18
LINC01550-205ENST00000556138 TRIM50Q86XT4 487 aa7.69□□□□□ -1.18
LINC01550-205ENST00000556138 ZNF594Q96JF6 807 aaPredicted RBP7.69□□□□□ -1.18
LINC01550-205ENST00000556138 ZMYND15Q9H091 742 aa7.69□□□□□ -1.18
LINC01550-205ENST00000556138 DNAAF2Q9NVR5 837 aaKnown RBP7.69□□□□□ -1.18
LINC01550-205ENST00000556138 GTF2E1P29083 439 aaPredicted RBP7.68□□□□□ -1.18
LINC01550-205ENST00000556138 TBCELQ5QJ74 424 aa7.68□□□□□ -1.18
LINC01550-205ENST00000556138 CFAP70Q5T0N1 1121 aa7.68□□□□□ -1.18
LINC01550-205ENST00000556138 KANK4Q5T7N3 995 aaPredicted RBP7.68□□□□□ -1.18
LINC01550-205ENST00000556138 CCDC102BQ68D86 513 aa7.68□□□□□ -1.18
LINC01550-205ENST00000556138 TNS4Q8IZW8 715 aa7.68□□□□□ -1.18
LINC01550-205ENST00000556138 GTPBP3Q969Y2 492 aaKnown RBP7.68□□□□□ -1.18
LINC01550-205ENST00000556138 A0A1B0GTH6 734 aa7.67□□□□□ -1.18
LINC01550-205ENST00000556138 SFI1A8K8P3 1242 aa7.67□□□□□ -1.18
LINC01550-205ENST00000556138 MSX1P28360 303 aa7.67□□□□□ -1.18
LINC01550-205ENST00000556138 LMOD1P29536 600 aaPredicted RBP7.67□□□□□ -1.18
LINC01550-205ENST00000556138 ZSCAN1Q8NBB4 408 aa7.67□□□□□ -1.18
LINC01550-205ENST00000556138 ZDHHC1Q8WTX9 485 aa7.67□□□□□ -1.18
LINC01550-205ENST00000556138 RUBCNLQ9H714 662 aa7.67□□□□□ -1.18
LINC01550-205ENST00000556138 PARP3Q9Y6F1 533 aa7.67□□□□□ -1.18
LINC01550-205ENST00000556138 CDK2AP1O14519 115 aa7.66□□□□□ -1.18
LINC01550-205ENST00000556138 ATP4AP20648 1035 aa7.66□□□□□ -1.18
LINC01550-205ENST00000556138 RASA1P20936 1047 aa7.66□□□□□ -1.18
LINC01550-205ENST00000556138 ATP1A2P50993 1020 aa7.66□□□□□ -1.18
LINC01550-205ENST00000556138 FOXK2Q01167 660 aa7.66□□□□□ -1.18
LINC01550-205ENST00000556138 UBAP2LQ14157 1087 aaKnown RBP7.66□□□□□ -1.18
LINC01550-205ENST00000556138 CRTC2Q53ET0 693 aaPredicted RBP7.66□□□□□ -1.18
LINC01550-205ENST00000556138 SIX5Q8N196 739 aa7.66□□□□□ -1.18
LINC01550-205ENST00000556138 NUCKS1Q9H1E3 243 aaKnown RBP7.66□□□□□ -1.18
LINC01550-205ENST00000556138 SCHIP1Q9P0W5 487 aaPredicted RBP7.66□□□□□ -1.18
LINC01550-205ENST00000556138 BACH1O14867 736 aa7.65□□□□□ -1.18
LINC01550-205ENST00000556138 LARGE2Q8N3Y3 721 aa7.65□□□□□ -1.18
LINC01550-205ENST00000556138 TSEN2Q8NCE0 465 aaKnown RBP7.65□□□□□ -1.18
LINC01550-205ENST00000556138 NIFKQ9BYG3 293 aaKnown RBP7.65□□□□□ -1.18
LINC01550-205ENST00000556138 CABP1Q9NZU7 370 aa7.65□□□□□ -1.18
LINC01550-205ENST00000556138 SH3PXD2AQ5TCZ1 1133 aa7.64□□□□□ -1.19
LINC01550-205ENST00000556138 SLC9A9Q8IVB4 645 aa7.64□□□□□ -1.19
LINC01550-205ENST00000556138 GMCL1Q96IK5 515 aa7.64□□□□□ -1.19
LINC01550-205ENST00000556138 H7C1W4 665 aa7.63□□□□□ -1.19
LINC01550-205ENST00000556138 LGR5O75473 907 aa7.63□□□□□ -1.19
LINC01550-205ENST00000556138 PTK7Q13308 1070 aa7.63□□□□□ -1.19
LINC01550-205ENST00000556138 CDCA8Q53HL2 280 aa7.63□□□□□ -1.19
LINC01550-205ENST00000556138 WHAMMQ8TF30 809 aa7.63□□□□□ -1.19
LINC01550-205ENST00000556138 AIDAQ96BJ3 306 aa7.63□□□□□ -1.19
LINC01550-205ENST00000556138 KLRG1Q96E93 195 aa7.63□□□□□ -1.19
LINC01550-205ENST00000556138 TSPAN10Q9H1Z9 355 aaPredicted RBP7.63□□□□□ -1.19
LINC01550-205ENST00000556138 ARID3CA6NKF2 412 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms