RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 FLT4P35916 1363 aa14.98□□□□□ -0.01
CHGA-205ENST00000556098 COL5A3P25940 1745 aaPredicted RBP14.98□□□□□ -0.01
CHGA-205ENST00000556098 HMGB2P26583 209 aaKnown RBP14.98□□□□□ -0.01
CHGA-205ENST00000556098 LINC00116Q8NCU8 138 aa14.98□□□□□ -0.01
CHGA-205ENST00000556098 VIRMAQ69YN4 1812 aaKnown RBP14.98□□□□□ -0.01
CHGA-205ENST00000556098 INSRP06213 1382 aa14.98□□□□□ -0.01
CHGA-205ENST00000556098 ANKRD26Q9UPS8 1709 aa14.97□□□□□ -0.01
CHGA-205ENST00000556098 KIF3CO14782 793 aa14.97□□□□□ -0.01
CHGA-205ENST00000556098 FYB1O15117 783 aa14.97□□□□□ -0.01
CHGA-205ENST00000556098 PIGBQ92521 554 aa14.97□□□□□ -0.01
CHGA-205ENST00000556098 TMOD3Q9NYL9 352 aa14.97□□□□□ -0.01
CHGA-205ENST00000556098 LOC102724428A0A0B4J2F2 783 aa14.96□□□□□ -0.01
CHGA-205ENST00000556098 MMP10P09238 476 aa14.96□□□□□ -0.01
CHGA-205ENST00000556098 SSFA2P28290 1259 aa14.96□□□□□ -0.01
CHGA-205ENST00000556098 ATP6V1AP38606 617 aa14.96□□□□□ -0.01
CHGA-205ENST00000556098 SIK1P57059 783 aa14.96□□□□□ -0.01
CHGA-205ENST00000556098 ARHGAP27Q6ZUM4 889 aa14.96□□□□□ -0.01
CHGA-205ENST00000556098 PRKRIP1Q9H875 184 aaPredicted RBP14.96□□□□□ -0.01
CHGA-205ENST00000556098 SBF1O95248 1867 aa14.95□□□□□ -0.02
CHGA-205ENST00000556098 CAPN15O75808 1086 aa14.95□□□□□ -0.02
CHGA-205ENST00000556098 APLP1P51693 650 aa14.95□□□□□ -0.02
CHGA-205ENST00000556098 SPG7Q9UQ90 795 aa14.95□□□□□ -0.02
CHGA-205ENST00000556098 EMILIN1Q9Y6C2 1016 aa14.95□□□□□ -0.02
CHGA-205ENST00000556098 PXDNLA1KZ92 1463 aa14.95□□□□□ -0.02
CHGA-205ENST00000556098 A0A0G2JLW4 131 aa14.94□□□□□ -0.02
CHGA-205ENST00000556098 C16orf71Q8IYS4 520 aaPredicted RBP14.94□□□□□ -0.02
CHGA-205ENST00000556098 ASAP1Q9ULH1 1129 aa14.94□□□□□ -0.02
CHGA-205ENST00000556098 MYH14Q7Z406 1995 aaKnown RBP14.93□□□□□ -0.02
CHGA-205ENST00000556098 ITPK1Q13572 414 aa14.93□□□□□ -0.02
CHGA-205ENST00000556098 RALBP1Q15311 655 aa14.93□□□□□ -0.02
CHGA-205ENST00000556098 RBM42Q9BTD8 480 aaKnown RBP14.93□□□□□ -0.02
CHGA-205ENST00000556098 NMRK2Q9NPI5 230 aa14.93□□□□□ -0.02
CHGA-205ENST00000556098 NPC1L1Q9UHC9 1359 aa14.93□□□□□ -0.02
CHGA-205ENST00000556098 TNRC6CQ9HCJ0 1690 aaKnown RBP14.93□□□□□ -0.02
CHGA-205ENST00000556098 FCHSD2O94868 740 aa14.92□□□□□ -0.02
CHGA-205ENST00000556098 HTRA3P83110 453 aa14.92□□□□□ -0.02
CHGA-205ENST00000556098 CACNA1SQ13698 1873 aa14.91□□□□□ -0.02
CHGA-205ENST00000556098 POLR3GLQ9BT43 218 aa14.91□□□□□ -0.02
CHGA-205ENST00000556098 TOMM70O94826 608 aa14.9□□□□□ -0.02
CHGA-205ENST00000556098 TRAPPC3LQ5T215 181 aa14.9□□□□□ -0.02
CHGA-205ENST00000556098 RTCBQ9Y3I0 505 aaKnown RBP14.9□□□□□ -0.02
CHGA-205ENST00000556098 KCPQ6ZWJ8 1503 aa14.89□□□□□ -0.03
CHGA-205ENST00000556098 DPEP1P16444 411 aa14.89□□□□□ -0.03
CHGA-205ENST00000556098 TNNT2P45379 298 aaPredicted RBP14.89□□□□□ -0.03
CHGA-205ENST00000556098 CCDC87Q9NVE4 849 aa14.89□□□□□ -0.03
CHGA-205ENST00000556098 PARP3Q9Y6F1 533 aa14.89□□□□□ -0.03
CHGA-205ENST00000556098 AFDNP55196 1824 aaKnown RBP14.89□□□□□ -0.03
CHGA-205ENST00000556098 TIAM2Q8IVF5 1701 aa14.89□□□□□ -0.03
CHGA-205ENST00000556098 ZNF831Q5JPB2 1677 aa14.88□□□□□ -0.03
CHGA-205ENST00000556098 IFNL2Q8IZJ0 200 aa14.88□□□□□ -0.03
CHGA-205ENST00000556098 C10orf71Q711Q0 1435 aa14.88□□□□□ -0.03
CHGA-205ENST00000556098 KIF24Q5T7B8 1368 aa14.87□□□□□ -0.03
CHGA-205ENST00000556098 TJP1Q07157 1748 aa14.87□□□□□ -0.03
CHGA-205ENST00000556098 PHKG2P15735 406 aa14.87□□□□□ -0.03
CHGA-205ENST00000556098 RFC4P35249 363 aa14.87□□□□□ -0.03
CHGA-205ENST00000556098 C9orf131Q5VYM1 1079 aa14.87□□□□□ -0.03
CHGA-205ENST00000556098 ATG3Q9NT62 314 aa14.87□□□□□ -0.03
CHGA-205ENST00000556098 TGFB2P61812 414 aa14.86□□□□□ -0.03
CHGA-205ENST00000556098 NKX1-1Q15270 411 aaPredicted RBP14.86□□□□□ -0.03
CHGA-205ENST00000556098 EYA1Q99502 592 aa14.86□□□□□ -0.03
CHGA-205ENST00000556098 MYBBP1AQ9BQG0 1328 aaKnown RBP14.86□□□□□ -0.03
CHGA-205ENST00000556098 PER1O15534 1290 aaPredicted RBP14.85□□□□□ -0.03
CHGA-205ENST00000556098 NLGN1Q8N2Q7 840 aa14.85□□□□□ -0.03
CHGA-205ENST00000556098 ARHGEF1Q92888 912 aaKnown RBP14.85□□□□□ -0.03
CHGA-205ENST00000556098 RNF181Q9P0P0 153 aa14.85□□□□□ -0.03
CHGA-205ENST00000556098 SCN11AQ9UI33 1791 aa14.85□□□□□ -0.03
CHGA-205ENST00000556098 PLEKHG2Q9H7P9 1386 aa14.84□□□□□ -0.03
CHGA-205ENST00000556098 DNAJC5GQ8N7S2 189 aa14.83□□□□□ -0.04
CHGA-205ENST00000556098 CARD14Q9BXL6 1004 aa14.83□□□□□ -0.04
CHGA-205ENST00000556098 RRAGCQ9HB90 399 aa14.83□□□□□ -0.04
CHGA-205ENST00000556098 DLEC1Q9Y238 1755 aa14.83□□□□□ -0.04
CHGA-205ENST00000556098 NCAPD2Q15021 1401 aa14.83□□□□□ -0.04
CHGA-205ENST00000556098 PTCD1O75127 700 aaKnown RBP14.82□□□□□ -0.04
CHGA-205ENST00000556098 GYS1P13807 737 aa14.82□□□□□ -0.04
CHGA-205ENST00000556098 COL13A1Q5TAT6 717 aaPredicted RBP14.82□□□□□ -0.04
CHGA-205ENST00000556098 RBM46Q8TBY0 533 aaKnown RBP14.82□□□□□ -0.04
CHGA-205ENST00000556098 PANK3Q9H999 370 aa14.82□□□□□ -0.04
CHGA-205ENST00000556098 SRP68Q9UHB9 627 aaKnown RBP14.82□□□□□ -0.04
CHGA-205ENST00000556098 KNSTRNQ9Y448 316 aa14.82□□□□□ -0.04
CHGA-205ENST00000556098 KDM2BQ8NHM5 1336 aa14.82□□□□□ -0.04
CHGA-205ENST00000556098 KDRP35968 1356 aa14.82□□□□□ -0.04
CHGA-205ENST00000556098 CABP4P57796 275 aa14.81□□□□□ -0.04
CHGA-205ENST00000556098 YTHDC1Q96MU7 727 aaKnown RBP14.81□□□□□ -0.04
CHGA-205ENST00000556098 PIM2Q9P1W9 311 aa14.81□□□□□ -0.04
CHGA-205ENST00000556098 CHRNA5P30532 468 aa14.8□□□□□ -0.04
CHGA-205ENST00000556098 EIF4A2Q14240 407 aaKnown RBP14.8□□□□□ -0.04
CHGA-205ENST00000556098 DALRD3Q5D0E6 543 aaKnown RBP14.8□□□□□ -0.04
CHGA-205ENST00000556098 ZNF530Q6P9A1 599 aaPredicted RBP14.8□□□□□ -0.04
CHGA-205ENST00000556098 KLRG1Q96E93 195 aa14.8□□□□□ -0.04
CHGA-205ENST00000556098 SLC4A9Q96Q91 983 aa14.8□□□□□ -0.04
CHGA-205ENST00000556098 MRS2Q9HD23 443 aa14.8□□□□□ -0.04
CHGA-205ENST00000556098 RPS6KA4O75676 772 aa14.79□□□□□ -0.04
CHGA-205ENST00000556098 TNS4Q8IZW8 715 aa14.79□□□□□ -0.04
CHGA-205ENST00000556098 CNTNAP4Q9C0A0 1308 aa14.79□□□□□ -0.04
CHGA-205ENST00000556098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.79□□□□□ -0.04
CHGA-205ENST00000556098 ADRA2BP18089 450 aa14.78□□□□□ -0.04
CHGA-205ENST00000556098 RASSF7Q02833 373 aa14.78□□□□□ -0.04
CHGA-205ENST00000556098 DICER1Q9UPY3 1922 aaKnown RBP14.78□□□□□ -0.04
CHGA-205ENST00000556098 KDM6AO15550 1401 aaPredicted RBP14.77□□□□□ -0.04
CHGA-205ENST00000556098 HSP90AB1P08238 724 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms