RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 IGHDP01880 384 aa18.72■□□□□ 0.59
VPS33B-205ENST00000556096 KRT24Q2M2I5 525 aa18.72■□□□□ 0.59
VPS33B-205ENST00000556096 LARP1Q6PKG0 1096 aaKnown RBP18.72■□□□□ 0.59
VPS33B-205ENST00000556096 ITPRIPQ8IWB1 547 aa18.72■□□□□ 0.59
VPS33B-205ENST00000556096 API5Q9BZZ5 524 aaKnown RBP18.72■□□□□ 0.59
VPS33B-205ENST00000556096 PCDHB15Q9Y5E8 787 aa18.72■□□□□ 0.59
VPS33B-205ENST00000556096 ZNF530Q6P9A1 599 aaPredicted RBP18.71■□□□□ 0.59
VPS33B-205ENST00000556096 POTEAQ6S8J7 498 aa18.71■□□□□ 0.59
VPS33B-205ENST00000556096 NLRP2Q9NX02 1062 aa18.71■□□□□ 0.59
VPS33B-205ENST00000556096 USP35Q9P2H5 1018 aa18.71■□□□□ 0.59
VPS33B-205ENST00000556096 SOCS7O14512 581 aa18.71■□□□□ 0.59
VPS33B-205ENST00000556096 CHMP4BQ9H444 224 aaKnown RBP18.71■□□□□ 0.59
VPS33B-205ENST00000556096 QTRT2Q9H974 415 aaKnown RBP18.71■□□□□ 0.59
VPS33B-205ENST00000556096 ABCC4O15439 1325 aa18.71■□□□□ 0.59
VPS33B-205ENST00000556096 OVOS2A0A0G2JMS6 1433 aa18.7■□□□□ 0.58
VPS33B-205ENST00000556096 WDR17Q8IZU2 1322 aa18.7■□□□□ 0.58
VPS33B-205ENST00000556096 ZNF772Q68DY9 489 aaPredicted RBP18.69■□□□□ 0.58
VPS33B-205ENST00000556096 RWDD1Q9H446 243 aaPredicted RBP18.69■□□□□ 0.58
VPS33B-205ENST00000556096 ZBTB40Q9NUA8 1239 aa18.69■□□□□ 0.58
VPS33B-205ENST00000556096 C1orf141Q5JVX7 400 aa18.69■□□□□ 0.58
VPS33B-205ENST00000556096 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.68■□□□□ 0.58
VPS33B-205ENST00000556096 TOM1L2Q6ZVM7 507 aa18.68■□□□□ 0.58
VPS33B-205ENST00000556096 LGR6Q9HBX8 967 aa18.68■□□□□ 0.58
VPS33B-205ENST00000556096 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.68■□□□□ 0.58
VPS33B-205ENST00000556096 PTPRCP08575 1304 aa18.68■□□□□ 0.58
VPS33B-205ENST00000556096 RAPGEF4Q8WZA2 1011 aa18.67■□□□□ 0.58
VPS33B-205ENST00000556096 TRPC5Q9UL62 973 aaPredicted RBP18.67■□□□□ 0.58
VPS33B-205ENST00000556096 ATRNO75882 1429 aa18.67■□□□□ 0.58
VPS33B-205ENST00000556096 RNMTO43148 476 aaKnown RBP18.66■□□□□ 0.58
VPS33B-205ENST00000556096 PARP4Q9UKK3 1724 aaKnown RBP18.66■□□□□ 0.58
VPS33B-205ENST00000556096 VIRMAQ69YN4 1812 aaKnown RBP18.66■□□□□ 0.58
VPS33B-205ENST00000556096 MEGF6O75095 1541 aa18.66■□□□□ 0.58
VPS33B-205ENST00000556096 ZBTB7BO15156 539 aaPredicted RBP18.66■□□□□ 0.58
VPS33B-205ENST00000556096 TATP17735 454 aaPredicted RBP18.66■□□□□ 0.58
VPS33B-205ENST00000556096 VPS72Q15906 364 aa18.66■□□□□ 0.58
VPS33B-205ENST00000556096 HDAC1Q13547 482 aaPredicted RBP18.65■□□□□ 0.58
VPS33B-205ENST00000556096 PKD1L3Q7Z443 1732 aa18.65■□□□□ 0.58
VPS33B-205ENST00000556096 TEFQ10587 303 aa18.64■□□□□ 0.57
VPS33B-205ENST00000556096 GJD4Q96KN9 370 aaPredicted RBP18.64■□□□□ 0.57
VPS33B-205ENST00000556096 ADAMTS7Q9UKP4 1686 aa18.64■□□□□ 0.57
VPS33B-205ENST00000556096 GLI3P10071 1580 aa18.64■□□□□ 0.57
VPS33B-205ENST00000556096 SPATA31A5Q5VU36 1347 aa18.63■□□□□ 0.57
VPS33B-205ENST00000556096 SPATA31A7Q8IWB4 1347 aa18.63■□□□□ 0.57
VPS33B-205ENST00000556096 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
VPS33B-205ENST00000556096 CCDC30Q5VVM6 783 aa18.63■□□□□ 0.57
VPS33B-205ENST00000556096 INTS3Q68E01 1043 aaKnown RBP18.63■□□□□ 0.57
VPS33B-205ENST00000556096 MPRIPQ6WCQ1 1025 aa18.63■□□□□ 0.57
VPS33B-205ENST00000556096 SPG7Q9UQ90 795 aa18.63■□□□□ 0.57
VPS33B-205ENST00000556096 WNK3Q9BYP7 1800 aa18.63■□□□□ 0.57
VPS33B-205ENST00000556096 CARD10Q9BWT7 1032 aa18.63■□□□□ 0.57
VPS33B-205ENST00000556096 CHMP4AQ9BY43 222 aa18.63■□□□□ 0.57
VPS33B-205ENST00000556096 KDM3BQ7LBC6 1761 aa18.62■□□□□ 0.57
VPS33B-205ENST00000556096 RGS12O14924 1447 aa18.62■□□□□ 0.57
VPS33B-205ENST00000556096 SPATA31A1Q5TZJ5 1347 aa18.62■□□□□ 0.57
VPS33B-205ENST00000556096 HOXB7P09629 217 aa18.62■□□□□ 0.57
VPS33B-205ENST00000556096 FAM98CQ17RN3 349 aaKnown RBP18.62■□□□□ 0.57
VPS33B-205ENST00000556096 STK31Q9BXU1 1019 aa18.62■□□□□ 0.57
VPS33B-205ENST00000556096 A0A0G2JS52 829 aa18.61■□□□□ 0.57
VPS33B-205ENST00000556096 EIF4A1P60842 406 aaKnown RBP18.61■□□□□ 0.57
VPS33B-205ENST00000556096 MYT1Q01538 1121 aa18.61■□□□□ 0.57
VPS33B-205ENST00000556096 SKAP1Q86WV1 359 aa18.61■□□□□ 0.57
VPS33B-205ENST00000556096 BTBD11A6QL63 1104 aa18.6■□□□□ 0.57
VPS33B-205ENST00000556096 RXRBP28702 533 aa18.6■□□□□ 0.57
VPS33B-205ENST00000556096 SHANK3Q9BYB0 1731 aa18.6■□□□□ 0.57
VPS33B-205ENST00000556096 CACNA1FO60840 1977 aa18.59■□□□□ 0.57
VPS33B-205ENST00000556096 PHKG2P15735 406 aa18.59■□□□□ 0.57
VPS33B-205ENST00000556096 RBM6P78332 1123 aaKnown RBP18.59■□□□□ 0.57
VPS33B-205ENST00000556096 PDE4AP27815 886 aa18.58■□□□□ 0.57
VPS33B-205ENST00000556096 IFNL2Q8IZJ0 200 aa18.58■□□□□ 0.57
VPS33B-205ENST00000556096 BACH2Q9BYV9 841 aa18.57■□□□□ 0.56
VPS33B-205ENST00000556096 SIPA1L3O60292 1781 aaPredicted RBP18.57■□□□□ 0.56
VPS33B-205ENST00000556096 G2E3Q7L622 706 aa18.57■□□□□ 0.56
VPS33B-205ENST00000556096 SMC5Q8IY18 1101 aa18.56■□□□□ 0.56
VPS33B-205ENST00000556096 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
VPS33B-205ENST00000556096 RGS3P49796 1198 aa18.55■□□□□ 0.56
VPS33B-205ENST00000556096 HDGFL1Q5TGJ6 251 aa18.55■□□□□ 0.56
VPS33B-205ENST00000556096 PDZRN3Q9UPQ7 1066 aa18.55■□□□□ 0.56
VPS33B-205ENST00000556096 SCN11AQ9UI33 1791 aa18.55■□□□□ 0.56
VPS33B-205ENST00000556096 KCNQ3O43525 872 aa18.54■□□□□ 0.56
VPS33B-205ENST00000556096 HSP90AB1P08238 724 aaKnown RBP18.54■□□□□ 0.56
VPS33B-205ENST00000556096 IL2RBP14784 551 aa18.54■□□□□ 0.56
VPS33B-205ENST00000556096 FLIIQ13045 1269 aa18.54■□□□□ 0.56
VPS33B-205ENST00000556096 KDM6AO15550 1401 aaPredicted RBP18.54■□□□□ 0.56
VPS33B-205ENST00000556096 CCT4P50991 539 aaKnown RBP18.54■□□□□ 0.56
VPS33B-205ENST00000556096 SEPT12Q8IYM1 358 aa18.54■□□□□ 0.56
VPS33B-205ENST00000556096 DCAF5Q96JK2 942 aa18.54■□□□□ 0.56
VPS33B-205ENST00000556096 SLC52A2Q9HAB3 445 aa18.54■□□□□ 0.56
VPS33B-205ENST00000556096 DISP2A7MBM2 1401 aa18.54■□□□□ 0.56
VPS33B-205ENST00000556096 CYP27B1O15528 508 aa18.52■□□□□ 0.56
VPS33B-205ENST00000556096 MRC1P22897 1456 aa18.52■□□□□ 0.55
VPS33B-205ENST00000556096 GIGYF1O75420 1035 aaPredicted RBP18.51■□□□□ 0.55
VPS33B-205ENST00000556096 FAM161AQ3B820 660 aa18.51■□□□□ 0.55
VPS33B-205ENST00000556096 BARGINQ6ZT62 677 aa18.51■□□□□ 0.55
VPS33B-205ENST00000556096 NECTIN2Q92692 538 aa18.51■□□□□ 0.55
VPS33B-205ENST00000556096 THRAP3Q9Y2W1 955 aaKnown RBP18.51■□□□□ 0.55
VPS33B-205ENST00000556096 BRWD3Q6RI45 1802 aa18.5■□□□□ 0.55
VPS33B-205ENST00000556096 FKBP5Q13451 457 aaPredicted RBP18.5■□□□□ 0.55
VPS33B-205ENST00000556096 FAM182BQ5T319 152 aa18.5■□□□□ 0.55
VPS33B-205ENST00000556096 ZCRB1Q8TBF4 217 aaKnown RBP18.5■□□□□ 0.55
VPS33B-205ENST00000556096 GCC1Q96CN9 775 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms